RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 PCCAP05165 728 aaPredicted RBP26.47■■□□□ 1.83
TSPAN3-202ENST00000346495 PDE1AP54750 535 aa26.47■■□□□ 1.83
TSPAN3-202ENST00000346495 FOXO4P98177 505 aa26.47■■□□□ 1.83
TSPAN3-202ENST00000346495 PA2G4Q9UQ80 394 aaKnown RBP26.47■■□□□ 1.83
TSPAN3-202ENST00000346495 G3BP1Q13283 466 aaKnown RBP eCLIP26.46■■□□□ 1.83
TSPAN3-202ENST00000346495 IL1RAPL2Q9NP60 686 aa26.46■■□□□ 1.83
TSPAN3-202ENST00000346495 GSPT1P15170 499 aaKnown RBP26.45■■□□□ 1.82
TSPAN3-202ENST00000346495 MX1P20591 662 aa26.45■■□□□ 1.82
TSPAN3-202ENST00000346495 RBM6P78332 1123 aaKnown RBP26.45■■□□□ 1.82
TSPAN3-202ENST00000346495 KRT27Q7Z3Y8 459 aa26.45■■□□□ 1.82
TSPAN3-202ENST00000346495 NLRP10Q86W26 655 aa26.45■■□□□ 1.82
TSPAN3-202ENST00000346495 ZBTB38Q8NAP3 1195 aaPredicted RBP26.45■■□□□ 1.82
TSPAN3-202ENST00000346495 BCL11BQ9C0K0 894 aaPredicted RBP26.45■■□□□ 1.82
TSPAN3-202ENST00000346495 RTL5Q5HYW3 569 aaPredicted RBP26.44■■□□□ 1.82
TSPAN3-202ENST00000346495 LMBR1LQ6UX01 489 aa26.44■■□□□ 1.82
TSPAN3-202ENST00000346495 FAM196AQ6ZSG2 479 aa26.44■■□□□ 1.82
TSPAN3-202ENST00000346495 COPRSQ9NQ92 184 aa26.44■■□□□ 1.82
TSPAN3-202ENST00000346495 STAP2Q9UGK3 403 aa26.44■■□□□ 1.82
TSPAN3-202ENST00000346495 RFX5P48382 616 aaPredicted RBP26.43■■□□□ 1.82
TSPAN3-202ENST00000346495 RC3H1Q5TC82 1133 aaKnown RBP26.43■■□□□ 1.82
TSPAN3-202ENST00000346495 AOX1Q06278 1338 aa26.43■■□□□ 1.82
TSPAN3-202ENST00000346495 SEC24BO95487 1268 aa26.43■■□□□ 1.82
TSPAN3-202ENST00000346495 GPTP24298 496 aa26.43■■□□□ 1.82
TSPAN3-202ENST00000346495 CCNL1Q9UK58 526 aaPredicted RBP26.43■■□□□ 1.82
TSPAN3-202ENST00000346495 BCORQ6W2J9 1755 aa26.42■■□□□ 1.82
TSPAN3-202ENST00000346495 ZNF34Q8IZ26 560 aa26.42■■□□□ 1.82
TSPAN3-202ENST00000346495 CLASRPQ8N2M8 674 aaKnown RBP26.42■■□□□ 1.82
TSPAN3-202ENST00000346495 PLA2G12BQ9BX93 195 aa26.42■■□□□ 1.82
TSPAN3-202ENST00000346495 UPF2Q9HAU5 1272 aaKnown RBP26.42■■□□□ 1.82
TSPAN3-202ENST00000346495 CDHR2Q9BYE9 1310 aa26.42■■□□□ 1.82
TSPAN3-202ENST00000346495 TAF1LQ8IZX4 1826 aa26.42■■□□□ 1.82
TSPAN3-202ENST00000346495 CAMTA2O94983 1202 aa26.41■■□□□ 1.82
TSPAN3-202ENST00000346495 PTPN12Q05209 780 aaKnown RBP26.4■■□□□ 1.82
TSPAN3-202ENST00000346495 CDC45O75419 566 aa26.39■■□□□ 1.82
TSPAN3-202ENST00000346495 FAM89AQ96GI7 184 aa26.39■■□□□ 1.82
TSPAN3-202ENST00000346495 CHMP3Q9Y3E7 222 aa26.39■■□□□ 1.82
TSPAN3-202ENST00000346495 TUBGCP6Q96RT7 1819 aa26.39■■□□□ 1.82
TSPAN3-202ENST00000346495 KCNQ4P56696 695 aa26.39■■□□□ 1.81
TSPAN3-202ENST00000346495 NUTM1Q86Y26 1132 aa26.39■■□□□ 1.81
TSPAN3-202ENST00000346495 SASH1O94885 1247 aa26.38■■□□□ 1.81
TSPAN3-202ENST00000346495 KLHDC4Q8TBB5 520 aa26.38■■□□□ 1.81
TSPAN3-202ENST00000346495 SIL1Q9H173 461 aa26.38■■□□□ 1.81
TSPAN3-202ENST00000346495 ZNF652Q9Y2D9 606 aa26.38■■□□□ 1.81
TSPAN3-202ENST00000346495 RGL2O15211 777 aa26.37■■□□□ 1.81
TSPAN3-202ENST00000346495 UBN2Q6ZU65 1347 aa26.36■■□□□ 1.81
TSPAN3-202ENST00000346495 RPS6KA4O75676 772 aa26.36■■□□□ 1.81
TSPAN3-202ENST00000346495 SDSP20132 328 aa26.36■■□□□ 1.81
TSPAN3-202ENST00000346495 PARP10Q53GL7 1025 aa26.36■■□□□ 1.81
TSPAN3-202ENST00000346495 TRMT112Q9UI30 125 aaKnown RBP26.36■■□□□ 1.81
TSPAN3-202ENST00000346495 MYH3P11055 1940 aa26.36■■□□□ 1.81
TSPAN3-202ENST00000346495 USP42Q9H9J4 1324 aaKnown RBP26.36■■□□□ 1.81
TSPAN3-202ENST00000346495 EIF5BO60841 1220 aaKnown RBP26.36■■□□□ 1.81
TSPAN3-202ENST00000346495 CLEC4GQ6UXB4 293 aa26.35■■□□□ 1.81
TSPAN3-202ENST00000346495 TBC1D9Q6ZT07 1266 aa26.35■■□□□ 1.81
TSPAN3-202ENST00000346495 SCN7AQ01118 1682 aa26.34■■□□□ 1.81
TSPAN3-202ENST00000346495 TTC41PQ6P2S7 1318 aa26.34■■□□□ 1.81
TSPAN3-202ENST00000346495 IFIT2P09913 472 aaKnown RBP26.34■■□□□ 1.81
TSPAN3-202ENST00000346495 C4BP0C0L5 1744 aa26.33■■□□□ 1.81
TSPAN3-202ENST00000346495 CSF1RP07333 972 aa26.33■■□□□ 1.81
TSPAN3-202ENST00000346495 TSHZ3Q63HK5 1081 aa26.33■■□□□ 1.81
TSPAN3-202ENST00000346495 GPATCH3Q96I76 525 aa26.33■■□□□ 1.81
TSPAN3-202ENST00000346495 IRS4O14654 1257 aaPredicted RBP26.32■■□□□ 1.8
TSPAN3-202ENST00000346495 AACSQ86V21 672 aa26.32■■□□□ 1.8
TSPAN3-202ENST00000346495 MFAP1P55081 439 aaKnown RBP26.32■■□□□ 1.8
TSPAN3-202ENST00000346495 CCDC57Q2TAC2 916 aa26.32■■□□□ 1.8
TSPAN3-202ENST00000346495 CASC1Q6TDU7 716 aa26.32■■□□□ 1.8
TSPAN3-202ENST00000346495 AK7Q96M32 723 aa26.32■■□□□ 1.8
TSPAN3-202ENST00000346495 UTP14AQ9BVJ6 771 aaKnown RBP26.32■■□□□ 1.8
TSPAN3-202ENST00000346495 GNPATO15228 680 aa26.31■■□□□ 1.8
TSPAN3-202ENST00000346495 PDE8AO60658 829 aa26.31■■□□□ 1.8
TSPAN3-202ENST00000346495 RXRBP28702 533 aa26.31■■□□□ 1.8
TSPAN3-202ENST00000346495 SUSD4Q5VX71 490 aa26.31■■□□□ 1.8
TSPAN3-202ENST00000346495 NIP7Q9Y221 180 aaKnown RBP eCLIP26.31■■□□□ 1.8
TSPAN3-202ENST00000346495 RTCBQ9Y3I0 505 aaKnown RBP26.31■■□□□ 1.8
TSPAN3-202ENST00000346495 SYNE4Q8N205 404 aa26.3■■□□□ 1.8
TSPAN3-202ENST00000346495 PI4K2BQ8TCG2 481 aa26.3■■□□□ 1.8
TSPAN3-202ENST00000346495 SH3TC1Q8TE82 1336 aa26.3■■□□□ 1.8
TSPAN3-202ENST00000346495 ERC2O15083 957 aa26.29■■□□□ 1.8
TSPAN3-202ENST00000346495 CIAO1O76071 339 aa26.29■■□□□ 1.8
TSPAN3-202ENST00000346495 TRIM37O94972 964 aa26.29■■□□□ 1.8
TSPAN3-202ENST00000346495 CTSWP56202 376 aa26.29■■□□□ 1.8
TSPAN3-202ENST00000346495 FBXO41Q8TF61 875 aa26.29■■□□□ 1.8
TSPAN3-202ENST00000346495 TBC1D32Q96NH3 1257 aa26.29■■□□□ 1.8
TSPAN3-202ENST00000346495 IPO9Q96P70 1041 aaKnown RBP26.29■■□□□ 1.8
TSPAN3-202ENST00000346495 ECHDC1Q9NTX5 307 aa26.29■■□□□ 1.8
TSPAN3-202ENST00000346495 FBXO3Q9UK99 471 aa26.29■■□□□ 1.8
TSPAN3-202ENST00000346495 IL15P40933 162 aaPredicted RBP26.28■■□□□ 1.8
TSPAN3-202ENST00000346495 SLC27A3Q5K4L6 730 aa26.28■■□□□ 1.8
TSPAN3-202ENST00000346495 EAF2Q96CJ1 260 aaPredicted RBP26.28■■□□□ 1.8
TSPAN3-202ENST00000346495 DDRGK1Q96HY6 314 aa26.28■■□□□ 1.8
TSPAN3-202ENST00000346495 NARFQ9UHQ1 456 aa26.28■■□□□ 1.8
TSPAN3-202ENST00000346495 GLRX3O76003 335 aaKnown RBP26.28■■□□□ 1.8
TSPAN3-202ENST00000346495 HSP90B1P14625 803 aaKnown RBP26.28■■□□□ 1.8
TSPAN3-202ENST00000346495 TFCP2Q12800 502 aa26.28■■□□□ 1.8
TSPAN3-202ENST00000346495 IFIT5Q13325 482 aaKnown RBP26.28■■□□□ 1.8
TSPAN3-202ENST00000346495 TTLL11Q8NHH1 800 aa26.28■■□□□ 1.8
TSPAN3-202ENST00000346495 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.28■■□□□ 1.8
TSPAN3-202ENST00000346495 LAMB2P55268 1798 aa26.27■■□□□ 1.8
TSPAN3-202ENST00000346495 AK9Q5TCS8 1911 aa26.27■■□□□ 1.8
TSPAN3-202ENST00000346495 TRIM6-TRIM34B2RNG4 842 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms