RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 GOLGA8AA7E2F4 631 aa20.08■□□□□ 0.81
SPAST-202ENST00000345662 EBAG9O00559 213 aa20.08■□□□□ 0.81
SPAST-202ENST00000345662 GTF3C6Q969F1 213 aa20.08■□□□□ 0.81
SPAST-202ENST00000345662 NUDT16Q96DE0 195 aaKnown RBP20.08■□□□□ 0.81
SPAST-202ENST00000345662 MEIS3Q99687 375 aa20.08■□□□□ 0.81
SPAST-202ENST00000345662 N4BP3O15049 544 aa20.08■□□□□ 0.8
SPAST-202ENST00000345662 NBPF11Q86T75 865 aa20.08■□□□□ 0.8
SPAST-202ENST00000345662 RHPN1Q8TCX5 695 aa20.08■□□□□ 0.8
SPAST-202ENST00000345662 USP26Q9BXU7 913 aa20.08■□□□□ 0.8
SPAST-202ENST00000345662 MATR3P43243 847 aaKnown RBP eCLIP20.08■□□□□ 0.89e-6■■□□□ 13
SPAST-202ENST00000345662 ZBTB40Q9NUA8 1239 aa20.08■□□□□ 0.8
SPAST-202ENST00000345662 CCDC91Q7Z6B0 441 aa20.07■□□□□ 0.8
SPAST-202ENST00000345662 BRF1Q92994 677 aa20.07■□□□□ 0.8
SPAST-202ENST00000345662 MTIF2P46199 727 aaKnown RBP20.07■□□□□ 0.8
SPAST-202ENST00000345662 PIP4K2BP78356 416 aa20.07■□□□□ 0.8
SPAST-202ENST00000345662 C16orf71Q8IYS4 520 aaPredicted RBP20.07■□□□□ 0.8
SPAST-202ENST00000345662 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.07■□□□□ 0.8
SPAST-202ENST00000345662 OPA1O60313 960 aa20.07■□□□□ 0.8
SPAST-202ENST00000345662 CTAGE1Q96RT6 745 aa20.07■□□□□ 0.8
SPAST-202ENST00000345662 NAPBQ9H115 298 aa20.07■□□□□ 0.8
SPAST-202ENST00000345662 IARSP41252 1262 aaKnown RBP20.06■□□□□ 0.8
SPAST-202ENST00000345662 LRP2BPQ9P2M1 347 aa20.06■□□□□ 0.8
SPAST-202ENST00000345662 CTAGE9A4FU28 777 aa20.06■□□□□ 0.8
SPAST-202ENST00000345662 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.06■□□□□ 0.8
SPAST-202ENST00000345662 DCTPP1Q9H773 170 aa20.06■□□□□ 0.8
SPAST-202ENST00000345662 ESCO1Q5FWF5 840 aa20.06■□□□□ 0.8
SPAST-202ENST00000345662 CCDC82Q8N4S0 544 aa20.06■□□□□ 0.8
SPAST-202ENST00000345662 MRPL50Q8N5N7 158 aaKnown RBP20.06■□□□□ 0.8
SPAST-202ENST00000345662 PPP1R12BO60237 982 aaPredicted RBP20.05■□□□□ 0.8
SPAST-202ENST00000345662 TUBBP07437 444 aa20.05■□□□□ 0.8
SPAST-202ENST00000345662 RBM8AQ9Y5S9 174 aaKnown RBP20.05■□□□□ 0.8
SPAST-202ENST00000345662 PYM1Q9BRP8 204 aaKnown RBP20.05■□□□□ 0.8
SPAST-202ENST00000345662 LMOD1P29536 600 aaPredicted RBP20.04■□□□□ 0.8
SPAST-202ENST00000345662 NME9Q86XW9 330 aa20.04■□□□□ 0.8
SPAST-202ENST00000345662 PLEKHM2Q8IWE5 1019 aa20.04■□□□□ 0.8
SPAST-202ENST00000345662 HMGXB3Q12766 1538 aa20.04■□□□□ 0.8
SPAST-202ENST00000345662 ADGRF5Q8IZF2 1346 aa20.04■□□□□ 0.8
SPAST-202ENST00000345662 AK2P54819 239 aa20.04■□□□□ 0.8
SPAST-202ENST00000345662 KRBA2Q6ZNG9 492 aa20.04■□□□□ 0.8
SPAST-202ENST00000345662 IFIT3O14879 490 aaKnown RBP20.03■□□□□ 0.8
SPAST-202ENST00000345662 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.03■□□□□ 0.8
SPAST-202ENST00000345662 A0A1B0GUL7 405 aa20.03■□□□□ 0.8
SPAST-202ENST00000345662 CETN2P41208 172 aa20.03■□□□□ 0.8
SPAST-202ENST00000345662 FAM114A1Q8IWE2 563 aa20.03■□□□□ 0.8
SPAST-202ENST00000345662 TAOK3Q9H2K8 898 aa20.03■□□□□ 0.8
SPAST-202ENST00000345662 SPINK5Q9NQ38 1064 aaPredicted RBP20.03■□□□□ 0.8
SPAST-202ENST00000345662 METTL24Q5JXM2 366 aa20.03■□□□□ 0.8
SPAST-202ENST00000345662 TCEANC2Q96MN5 208 aa20.03■□□□□ 0.8
SPAST-202ENST00000345662 DBF4Q9UBU7 674 aaPredicted RBP20.03■□□□□ 0.8
SPAST-202ENST00000345662 GSTTP1A0A1W2PQM5 241 aa20.03■□□□□ 0.8
SPAST-202ENST00000345662 PPFIA3O75145 1194 aa20.03■□□□□ 0.8
SPAST-202ENST00000345662 CYLC1P35663 651 aaPredicted RBP20.03■□□□□ 0.8
SPAST-202ENST00000345662 ATRIPQ8WXE1 791 aa20.03■□□□□ 0.8
SPAST-202ENST00000345662 POLR3AO14802 1390 aaPredicted RBP20.03■□□□□ 0.8
SPAST-202ENST00000345662 CTCFLQ8NI51 663 aaPredicted RBP20.02■□□□□ 0.8
SPAST-202ENST00000345662 MYD88Q99836 296 aa20.02■□□□□ 0.8
SPAST-202ENST00000345662 ATP2B2Q01814 1243 aa20.02■□□□□ 0.8
SPAST-202ENST00000345662 RTL1A6NKG5 1358 aa20.02■□□□□ 0.8
SPAST-202ENST00000345662 ANKRD36BQ8N2N9 1353 aa20.02■□□□□ 0.8
SPAST-202ENST00000345662 OTUD6BQ8N6M0 293 aa20.02■□□□□ 0.8
SPAST-202ENST00000345662 ZNF500O60304 480 aaPredicted RBP20.02■□□□□ 0.79
SPAST-202ENST00000345662 ATP2C2O75185 946 aa20.02■□□□□ 0.79
SPAST-202ENST00000345662 SPAG1Q07617 926 aa20.02■□□□□ 0.79
SPAST-202ENST00000345662 IFNKQ9P0W0 207 aa20.02■□□□□ 0.79
SPAST-202ENST00000345662 TMCO5BA8MYB1 307 aa20.01■□□□□ 0.79
SPAST-202ENST00000345662 HDXQ7Z353 690 aa20.01■□□□□ 0.79
SPAST-202ENST00000345662 FAM83GA6ND36 823 aa20.01■□□□□ 0.79
SPAST-202ENST00000345662 PHACTR2O75167 634 aa20.01■□□□□ 0.79
SPAST-202ENST00000345662 ATF3P18847 181 aa20.01■□□□□ 0.79
SPAST-202ENST00000345662 PIK3R4Q99570 1358 aa20.01■□□□□ 0.79
SPAST-202ENST00000345662 HSP90AA4PQ58FG1 418 aa20.01■□□□□ 0.79
SPAST-202ENST00000345662 METAP2P50579 478 aaKnown RBP eCLIP20.01■□□□□ 0.79
SPAST-202ENST00000345662 EVCP57679 992 aa20.01■□□□□ 0.79
SPAST-202ENST00000345662 PLCD3Q8N3E9 789 aa20.01■□□□□ 0.79
SPAST-202ENST00000345662 PPP1R9BQ96SB3 815 aa20.01■□□□□ 0.79
SPAST-202ENST00000345662 ARHGEF11O15085 1522 aa20.01■□□□□ 0.79
SPAST-202ENST00000345662 AKR1B10O60218 316 aa20■□□□□ 0.79
SPAST-202ENST00000345662 CCDC85AQ96PX6 553 aaPredicted RBP20■□□□□ 0.79
SPAST-202ENST00000345662 GOLIM4O00461 696 aa20■□□□□ 0.79
SPAST-202ENST00000345662 C17orf53Q8N3J3 647 aaPredicted RBP20■□□□□ 0.79
SPAST-202ENST00000345662 DNMBPQ6XZF7 1577 aa20■□□□□ 0.79
SPAST-202ENST00000345662 TRIM21P19474 475 aaKnown RBP20■□□□□ 0.79
SPAST-202ENST00000345662 NCOA7Q8NI08 942 aa20■□□□□ 0.79
SPAST-202ENST00000345662 PTPRKQ15262 1439 aa20■□□□□ 0.79
SPAST-202ENST00000345662 MINDY4BA8MYZ0 360 aa19.99■□□□□ 0.79
SPAST-202ENST00000345662 LMBRD1Q9NUN5 540 aa19.99■□□□□ 0.79
SPAST-202ENST00000345662 RNF41Q9H4P4 317 aaPredicted RBP19.99■□□□□ 0.79
SPAST-202ENST00000345662 HYPKQ9NX55 129 aa19.99■□□□□ 0.79
SPAST-202ENST00000345662 ATP8B2P98198 1209 aa19.99■□□□□ 0.79
SPAST-202ENST00000345662 ABCA10Q8WWZ4 1543 aa19.99■□□□□ 0.79
SPAST-202ENST00000345662 FAM135AQ9P2D6 1515 aa19.99■□□□□ 0.79
SPAST-202ENST00000345662 CYB5RLQ6IPT4 315 aa19.99■□□□□ 0.79
SPAST-202ENST00000345662 OSCARQ8IYS5 282 aa19.99■□□□□ 0.79
SPAST-202ENST00000345662 RAB34Q9BZG1 259 aa19.99■□□□□ 0.79
SPAST-202ENST00000345662 PIK3C2GO75747 1445 aa19.99■□□□□ 0.79
SPAST-202ENST00000345662 SSR1P43307 286 aaKnown RBP19.98■□□□□ 0.79
SPAST-202ENST00000345662 MICU3Q86XE3 530 aa19.98■□□□□ 0.79
SPAST-202ENST00000345662 PUF60Q9UHX1 559 aaKnown RBP19.98■□□□□ 0.79
SPAST-202ENST00000345662 KIAA0586Q9BVV6 1533 aa19.98■□□□□ 0.79
SPAST-202ENST00000345662 CCDC194A0A1B0GVG4 234 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms