RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 U2SURPO15042 1029 aaKnown RBP9.63□□□□□ -0.87
ATG4A-201ENST00000343524 DHX16O60231 1041 aaKnown RBP9.63□□□□□ -0.87
ATG4A-201ENST00000343524 NEK4P51957 841 aa9.63□□□□□ -0.87
ATG4A-201ENST00000343524 PTPN14Q15678 1187 aa9.63□□□□□ -0.87
ATG4A-201ENST00000343524 POTEBQ6S5H4 581 aa9.63□□□□□ -0.87
ATG4A-201ENST00000343524 SPNS2Q8IVW8 549 aa9.63□□□□□ -0.87
ATG4A-201ENST00000343524 DRC7Q8IY82 874 aa9.63□□□□□ -0.87
ATG4A-201ENST00000343524 MPNDQ8N594 471 aa9.63□□□□□ -0.87
ATG4A-201ENST00000343524 SPC24Q8NBT2 197 aa9.63□□□□□ -0.87
ATG4A-201ENST00000343524 IL17RAQ96F46 866 aa9.63□□□□□ -0.87
ATG4A-201ENST00000343524 CARD14Q9BXL6 1004 aa9.63□□□□□ -0.87
ATG4A-201ENST00000343524 EFCAB6Q5THR3 1501 aa9.63□□□□□ -0.87
ATG4A-201ENST00000343524 ABCC4O15439 1325 aa9.62□□□□□ -0.87
ATG4A-201ENST00000343524 GADD45BO75293 160 aaPredicted RBP9.62□□□□□ -0.87
ATG4A-201ENST00000343524 TPM1P09493 284 aa9.62□□□□□ -0.87
ATG4A-201ENST00000343524 U2AF1L5P0DN76 240 aaPredicted RBP9.62□□□□□ -0.87
ATG4A-201ENST00000343524 EMP3P54852 163 aa9.62□□□□□ -0.87
ATG4A-201ENST00000343524 U2AF1Q01081 240 aaKnown RBP eCLIP9.62□□□□□ -0.87
ATG4A-201ENST00000343524 FOXD4L5Q5VV16 416 aaPredicted RBP9.62□□□□□ -0.87
ATG4A-201ENST00000343524 ZSCAN25Q6NSZ9 544 aa9.62□□□□□ -0.87
ATG4A-201ENST00000343524 FILIP1Q7Z7B0 1213 aa9.62□□□□□ -0.87
ATG4A-201ENST00000343524 FOXD4L4Q8WXT5 416 aaPredicted RBP9.62□□□□□ -0.87
ATG4A-201ENST00000343524 KCND1Q9NSA2 647 aa9.62□□□□□ -0.87
ATG4A-201ENST00000343524 A0A1B0GUL7 405 aa9.62□□□□□ -0.87
ATG4A-201ENST00000343524 H2AFXP16104 143 aaPredicted RBP9.62□□□□□ -0.87
ATG4A-201ENST00000343524 GOLGA5Q8TBA6 731 aa9.62□□□□□ -0.87
ATG4A-201ENST00000343524 API5Q9BZZ5 524 aaKnown RBP9.62□□□□□ -0.87
ATG4A-201ENST00000343524 ZNF215Q9UL58 517 aaPredicted RBP9.62□□□□□ -0.87
ATG4A-201ENST00000343524 PTPRCP08575 1304 aa9.61□□□□□ -0.87
ATG4A-201ENST00000343524 MYO1CO00159 1063 aa9.61□□□□□ -0.87
ATG4A-201ENST00000343524 IVLP07476 585 aa9.61□□□□□ -0.87
ATG4A-201ENST00000343524 HOXB3P14651 431 aaPredicted RBP9.61□□□□□ -0.87
ATG4A-201ENST00000343524 GUCY2CP25092 1073 aa9.61□□□□□ -0.87
ATG4A-201ENST00000343524 ELF2Q15723 593 aa9.61□□□□□ -0.87
ATG4A-201ENST00000343524 CCDC186Q7Z3E2 898 aa9.61□□□□□ -0.87
ATG4A-201ENST00000343524 RNF25Q96BH1 459 aaPredicted RBP9.61□□□□□ -0.87
ATG4A-201ENST00000343524 GJD4Q96KN9 370 aaPredicted RBP9.61□□□□□ -0.87
ATG4A-201ENST00000343524 DCTPP1Q9H773 170 aa9.61□□□□□ -0.87
ATG4A-201ENST00000343524 ZSCAN22P10073 491 aaPredicted RBP9.6□□□□□ -0.87
ATG4A-201ENST00000343524 TMPOP42166 694 aaKnown RBP9.6□□□□□ -0.87
ATG4A-201ENST00000343524 MMRN1Q13201 1228 aa9.6□□□□□ -0.87
ATG4A-201ENST00000343524 R3HDM1Q15032 1099 aaKnown RBP9.6□□□□□ -0.87
ATG4A-201ENST00000343524 TMCO3Q6UWJ1 677 aa9.6□□□□□ -0.87
ATG4A-201ENST00000343524 PLA2G4DQ86XP0 818 aa9.6□□□□□ -0.87
ATG4A-201ENST00000343524 PSD3Q9NYI0 1048 aa9.6□□□□□ -0.87
ATG4A-201ENST00000343524 SOX12O15370 315 aa9.6□□□□□ -0.87
ATG4A-201ENST00000343524 SDSP20132 328 aa9.6□□□□□ -0.87
ATG4A-201ENST00000343524 BAG6P46379 1132 aa9.6□□□□□ -0.87
ATG4A-201ENST00000343524 MTHFSP49914 203 aa9.6□□□□□ -0.87
ATG4A-201ENST00000343524 ZNF75DP51815 510 aa9.6□□□□□ -0.87
ATG4A-201ENST00000343524 MAP3K11Q16584 847 aa9.6□□□□□ -0.87
ATG4A-201ENST00000343524 KRBA2Q6ZNG9 492 aa9.6□□□□□ -0.87
ATG4A-201ENST00000343524 NYAP1Q6ZVC0 841 aa9.6□□□□□ -0.87
ATG4A-201ENST00000343524 CEP120Q8N960 986 aa9.6□□□□□ -0.87
ATG4A-201ENST00000343524 IQUBQ8NA54 791 aa9.6□□□□□ -0.87
ATG4A-201ENST00000343524 MNS1Q8NEH6 495 aa9.6□□□□□ -0.87
ATG4A-201ENST00000343524 RTF1Q92541 710 aaKnown RBP9.6□□□□□ -0.87
ATG4A-201ENST00000343524 SRCIN1Q9C0H9 1055 aa9.6□□□□□ -0.87
ATG4A-201ENST00000343524 DEF6Q9H4E7 631 aa9.6□□□□□ -0.87
ATG4A-201ENST00000343524 LRRFIP2Q9Y608 721 aaKnown RBP9.6□□□□□ -0.87
ATG4A-201ENST00000343524 DCCP43146 1447 aa9.59□□□□□ -0.87
ATG4A-201ENST00000343524 G3V3G9 751 aa9.59□□□□□ -0.87
ATG4A-201ENST00000343524 PNMA6AP0CW24 399 aaPredicted RBP9.59□□□□□ -0.87
ATG4A-201ENST00000343524 LMOD3Q0VAK6 560 aa9.59□□□□□ -0.87
ATG4A-201ENST00000343524 ZSCAN26Q16670 478 aa9.59□□□□□ -0.87
ATG4A-201ENST00000343524 SYT10Q6XYQ8 523 aa9.59□□□□□ -0.87
ATG4A-201ENST00000343524 CERS3Q8IU89 383 aa9.59□□□□□ -0.87
ATG4A-201ENST00000343524 CCDC191Q8NCU4 936 aa9.59□□□□□ -0.87
ATG4A-201ENST00000343524 TDRD7Q8NHU6 1098 aaKnown RBP9.59□□□□□ -0.87
ATG4A-201ENST00000343524 ZNF592Q92610 1267 aa9.59□□□□□ -0.87
ATG4A-201ENST00000343524 QRICH2Q9H0J4 1663 aa9.59□□□□□ -0.87
ATG4A-201ENST00000343524 CDC42BPGQ6DT37 1551 aa9.59□□□□□ -0.87
ATG4A-201ENST00000343524 IFT172Q9UG01 1749 aa9.59□□□□□ -0.87
ATG4A-201ENST00000343524 ANKRD26Q9UPS8 1709 aa9.59□□□□□ -0.87
ATG4A-201ENST00000343524 NRDCO43847 1150 aa9.58□□□□□ -0.88
ATG4A-201ENST00000343524 KIF1CO43896 1103 aaKnown RBP9.58□□□□□ -0.88
ATG4A-201ENST00000343524 TTC31Q49AM3 519 aaPredicted RBP9.58□□□□□ -0.88
ATG4A-201ENST00000343524 CCDC91Q7Z6B0 441 aa9.58□□□□□ -0.88
ATG4A-201ENST00000343524 SRLQ86TD4 932 aa9.58□□□□□ -0.88
ATG4A-201ENST00000343524 RPAP2Q8IXW5 612 aaPredicted RBP9.58□□□□□ -0.88
ATG4A-201ENST00000343524 HS3ST6Q96QI5 342 aa9.58□□□□□ -0.88
ATG4A-201ENST00000343524 SRRTQ9BXP5 876 aaKnown RBP9.58□□□□□ -0.88
ATG4A-201ENST00000343524 TRIM5Q9C035 493 aa9.58□□□□□ -0.88
ATG4A-201ENST00000343524 NUP62CLQ9H1M0 184 aa9.58□□□□□ -0.88
ATG4A-201ENST00000343524 POLKQ9UBT6 870 aa9.58□□□□□ -0.88
ATG4A-201ENST00000343524 CLIP2Q9UDT6 1046 aa9.58□□□□□ -0.88
ATG4A-201ENST00000343524 FHOD1Q9Y613 1164 aa9.58□□□□□ -0.88
ATG4A-201ENST00000343524 CCP110O43303 1012 aa9.58□□□□□ -0.88
ATG4A-201ENST00000343524 FBXO18Q8NFZ0 1043 aa9.58□□□□□ -0.88
ATG4A-201ENST00000343524 PUS7Q96PZ0 661 aaKnown RBP9.58□□□□□ -0.88
ATG4A-201ENST00000343524 OSBPL3Q9H4L5 887 aa9.58□□□□□ -0.88
ATG4A-201ENST00000343524 L2HGDHQ9H9P8 463 aa9.58□□□□□ -0.88
ATG4A-201ENST00000343524 GDPD2Q9HCC8 539 aa9.58□□□□□ -0.88
ATG4A-201ENST00000343524 CNPY2Q9Y2B0 182 aa9.58□□□□□ -0.88
ATG4A-201ENST00000343524 TBX22Q9Y458 520 aa9.58□□□□□ -0.88
ATG4A-201ENST00000343524 KNDC1Q76NI1 1749 aa9.58□□□□□ -0.88
ATG4A-201ENST00000343524 BRWD3Q6RI45 1802 aa9.57□□□□□ -0.88
ATG4A-201ENST00000343524 COL3A1P02461 1466 aaPredicted RBP9.57□□□□□ -0.88
ATG4A-201ENST00000343524 AP5Z1O43299 807 aa9.57□□□□□ -0.88
ATG4A-201ENST00000343524 SMARCA5O60264 1052 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms