RNA–Protein interactions for RNA: ENST00000342784.6

SYDE1-201, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYDE1, Length 3,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-201ENST00000342784 A0A1W2PP64 1363 aa16.1■□□□□ 0.17
SYDE1-201ENST00000342784 SSH2Q76I76 1423 aa16.1■□□□□ 0.17
SYDE1-201ENST00000342784 DHX16O60231 1041 aaKnown RBP16.1■□□□□ 0.17
SYDE1-201ENST00000342784 SNW1Q13573 536 aaKnown RBP16.1■□□□□ 0.17
SYDE1-201ENST00000342784 TTC6Q86TZ1 520 aa16.1■□□□□ 0.17
SYDE1-201ENST00000342784 RNF217Q8TC41 542 aa16.1■□□□□ 0.17
SYDE1-201ENST00000342784 MIS18AQ9NYP9 233 aa16.1■□□□□ 0.17
SYDE1-201ENST00000342784 TMEM131LA2VDJ0 1609 aa16.1■□□□□ 0.17
SYDE1-201ENST00000342784 GOLIM4O00461 696 aa16.1■□□□□ 0.17
SYDE1-201ENST00000342784 CCDC172P0C7W6 258 aa16.1■□□□□ 0.17
SYDE1-201ENST00000342784 RRS1Q15050 365 aaKnown RBP16.1■□□□□ 0.17
SYDE1-201ENST00000342784 UBXN4Q92575 508 aa16.1■□□□□ 0.17
SYDE1-201ENST00000342784 LARP1BQ659C4 914 aaKnown RBP16.09■□□□□ 0.17
SYDE1-201ENST00000342784 PPLO60437 1756 aa16.09■□□□□ 0.17
SYDE1-201ENST00000342784 RIMS1Q86UR5 1692 aaKnown RBP16.09■□□□□ 0.17
SYDE1-201ENST00000342784 RUFY3Q7L099 469 aa16.09■□□□□ 0.17
SYDE1-201ENST00000342784 HDGFL2Q7Z4V5 671 aaPredicted RBP16.09■□□□□ 0.17
SYDE1-201ENST00000342784 MNS1Q8NEH6 495 aa16.09■□□□□ 0.17
SYDE1-201ENST00000342784 SPATA31D1Q6ZQQ2 1576 aa16.09■□□□□ 0.17
SYDE1-201ENST00000342784 NRDCO43847 1150 aa16.09■□□□□ 0.17
SYDE1-201ENST00000342784 CASTP20810 708 aaKnown RBP16.09■□□□□ 0.17
SYDE1-201ENST00000342784 NYAP1Q6ZVC0 841 aa16.09■□□□□ 0.17
SYDE1-201ENST00000342784 SPATA32Q96LK8 384 aa16.09■□□□□ 0.17
SYDE1-201ENST00000342784 FAM173BQ6P4H8 233 aa16.08■□□□□ 0.17
SYDE1-201ENST00000342784 HOMER1Q86YM7 354 aa16.08■□□□□ 0.17
SYDE1-201ENST00000342784 PUS7Q96PZ0 661 aaKnown RBP16.08■□□□□ 0.17
SYDE1-201ENST00000342784 SATB1Q01826 763 aa16.08■□□□□ 0.16
SYDE1-201ENST00000342784 ZSCAN26Q16670 478 aa16.08■□□□□ 0.16
SYDE1-201ENST00000342784 HSP90AB3PQ58FF7 597 aa16.08■□□□□ 0.16
SYDE1-201ENST00000342784 CCAR2Q8N163 923 aaKnown RBP16.08■□□□□ 0.16
SYDE1-201ENST00000342784 USP16Q9Y5T5 823 aa16.08■□□□□ 0.16
SYDE1-201ENST00000342784 FHOD1Q9Y613 1164 aa16.08■□□□□ 0.16
SYDE1-201ENST00000342784 MAP4K4O95819 1239 aaPredicted RBP16.07■□□□□ 0.16
SYDE1-201ENST00000342784 ZNF853P0CG23 659 aa16.07■□□□□ 0.16
SYDE1-201ENST00000342784 CPA1P15085 419 aa16.07■□□□□ 0.16
SYDE1-201ENST00000342784 TFIP11Q9UBB9 837 aaKnown RBP16.07■□□□□ 0.16
SYDE1-201ENST00000342784 SNX14Q9Y5W7 946 aa16.07■□□□□ 0.16
SYDE1-201ENST00000342784 TMEM2Q9UHN6 1383 aa16.07■□□□□ 0.16
SYDE1-201ENST00000342784 CTR9Q6PD62 1173 aa16.07■□□□□ 0.16
SYDE1-201ENST00000342784 AK7Q96M32 723 aa16.07■□□□□ 0.16
SYDE1-201ENST00000342784 USP32Q8NFA0 1604 aa16.07■□□□□ 0.16
SYDE1-201ENST00000342784 MYO1CO00159 1063 aa16.07■□□□□ 0.16
SYDE1-201ENST00000342784 H2AFXP16104 143 aaPredicted RBP16.07■□□□□ 0.16
SYDE1-201ENST00000342784 CABP1Q9NZU7 370 aa16.07■□□□□ 0.16
SYDE1-201ENST00000342784 GNAI2P04899 355 aa16.06■□□□□ 0.16
SYDE1-201ENST00000342784 PLA2G4AP47712 749 aa16.06■□□□□ 0.16
SYDE1-201ENST00000342784 SCAND2PQ9GZW5 306 aaPredicted RBP16.06■□□□□ 0.16
SYDE1-201ENST00000342784 COL3A1P02461 1466 aaPredicted RBP16.06■□□□□ 0.16
SYDE1-201ENST00000342784 CDC25BP30305 580 aa16.06■□□□□ 0.16
SYDE1-201ENST00000342784 DNAJC21Q5F1R6 531 aaKnown RBP16.06■□□□□ 0.16
SYDE1-201ENST00000342784 UNC5CLQ8IV45 518 aa16.06■□□□□ 0.16
SYDE1-201ENST00000342784 TRIM66O15016 1216 aa16.06■□□□□ 0.16
SYDE1-201ENST00000342784 CASQ1P31415 396 aa16.06■□□□□ 0.16
SYDE1-201ENST00000342784 GYS2P54840 703 aa16.06■□□□□ 0.16
SYDE1-201ENST00000342784 NBPF20Q3BBV1 942 aa16.06■□□□□ 0.16
SYDE1-201ENST00000342784 MUM1L1Q5H9M0 696 aa16.06■□□□□ 0.16
SYDE1-201ENST00000342784 NUTM2GQ5VZR2 741 aa16.06■□□□□ 0.16
SYDE1-201ENST00000342784 ICE2Q659A1 982 aa16.06■□□□□ 0.16
SYDE1-201ENST00000342784 CEP120Q8N960 986 aa16.06■□□□□ 0.16
SYDE1-201ENST00000342784 SYTL4Q96C24 671 aaPredicted RBP16.06■□□□□ 0.16
SYDE1-201ENST00000342784 CLSTN2Q9H4D0 955 aa16.06■□□□□ 0.16
SYDE1-201ENST00000342784 PDRG1Q9NUG6 133 aa16.06■□□□□ 0.16
SYDE1-201ENST00000342784 HSPA2P54652 639 aa16.05■□□□□ 0.16
SYDE1-201ENST00000342784 NOM1Q5C9Z4 860 aaKnown RBP16.05■□□□□ 0.16
SYDE1-201ENST00000342784 ZSCAN31Q96LW9 406 aaPredicted RBP16.05■□□□□ 0.16
SYDE1-201ENST00000342784 C3P01024 1663 aa16.05■□□□□ 0.16
SYDE1-201ENST00000342784 LARGE1O95461 756 aa16.05■□□□□ 0.16
SYDE1-201ENST00000342784 CAVIN2O95810 425 aa16.05■□□□□ 0.16
SYDE1-201ENST00000342784 SLC4A2P04920 1241 aa16.05■□□□□ 0.16
SYDE1-201ENST00000342784 METP08581 1390 aa16.05■□□□□ 0.16
SYDE1-201ENST00000342784 PTPRCP08575 1304 aa16.05■□□□□ 0.16
SYDE1-201ENST00000342784 NPHP3Q7Z494 1330 aa16.05■□□□□ 0.16
SYDE1-201ENST00000342784 SH2B1Q9NRF2 756 aaPredicted RBP16.04■□□□□ 0.16
SYDE1-201ENST00000342784 NECAB1Q8N987 351 aa16.04■□□□□ 0.16
SYDE1-201ENST00000342784 SMARCE1Q969G3 411 aa16.04■□□□□ 0.16
SYDE1-201ENST00000342784 JAKMIP1Q96N16 626 aaKnown RBP16.04■□□□□ 0.16
SYDE1-201ENST00000342784 TTC14Q96N46 770 aa16.04■□□□□ 0.16
SYDE1-201ENST00000342784 CLSTN1O94985 981 aa16.04■□□□□ 0.16
SYDE1-201ENST00000342784 PDCP20941 246 aa16.04■□□□□ 0.16
SYDE1-201ENST00000342784 MRFAP1L1Q96HT8 127 aa16.04■□□□□ 0.16
SYDE1-201ENST00000342784 IL1RAPL2Q9NP60 686 aa16.04■□□□□ 0.16
SYDE1-201ENST00000342784 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.04■□□□□ 0.16
SYDE1-201ENST00000342784 EMILIN1Q9Y6C2 1016 aa16.04■□□□□ 0.16
SYDE1-201ENST00000342784 MYO3AQ8NEV4 1616 aa16.03■□□□□ 0.16
SYDE1-201ENST00000342784 KNDC1Q76NI1 1749 aa16.03■□□□□ 0.16
SYDE1-201ENST00000342784 F6X3S4 739 aa16.03■□□□□ 0.16
SYDE1-201ENST00000342784 OAS2P29728 719 aaKnown RBP16.03■□□□□ 0.16
SYDE1-201ENST00000342784 LMAN1P49257 510 aa16.03■□□□□ 0.16
SYDE1-201ENST00000342784 ST5P78524 1137 aa16.03■□□□□ 0.16
SYDE1-201ENST00000342784 RASEFQ8IZ41 740 aa16.03■□□□□ 0.16
SYDE1-201ENST00000342784 LRRC7Q96NW7 1537 aa16.03■□□□□ 0.16
SYDE1-201ENST00000342784 QRICH2Q9H0J4 1663 aa16.03■□□□□ 0.16
SYDE1-201ENST00000342784 ZNF526Q8TF50 670 aaPredicted RBP16.03■□□□□ 0.16
SYDE1-201ENST00000342784 CYP46A1Q9Y6A2 500 aa16.03■□□□□ 0.16
SYDE1-201ENST00000342784 IFT172Q9UG01 1749 aa16.03■□□□□ 0.16
SYDE1-201ENST00000342784 ELP1O95163 1332 aa16.03■□□□□ 0.16
SYDE1-201ENST00000342784 GNL2Q13823 731 aaKnown RBP16.02■□□□□ 0.16
SYDE1-201ENST00000342784 IL25Q9H293 177 aa16.02■□□□□ 0.16
SYDE1-201ENST00000342784 YTHDC2Q9H6S0 1430 aaKnown RBP16.02■□□□□ 0.16
SYDE1-201ENST00000342784 EPB41L2O43491 1005 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms