RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 GRM8O00222 908 aa18.55■□□□□ 0.56
CSRP1-201ENST00000340006 RGL2O15211 777 aa18.55■□□□□ 0.56
CSRP1-201ENST00000340006 PPP1R42Q7Z4L9 355 aa18.55■□□□□ 0.56
CSRP1-201ENST00000340006 NLGN1Q8N2Q7 840 aa18.55■□□□□ 0.56
CSRP1-201ENST00000340006 MEIS3Q99687 375 aa18.55■□□□□ 0.56
CSRP1-201ENST00000340006 TRMT112Q9UI30 125 aaKnown RBP18.55■□□□□ 0.56
CSRP1-201ENST00000340006 NPHP1O15259 732 aa18.54■□□□□ 0.56
CSRP1-201ENST00000340006 UBTFL1P0CB47 393 aaPredicted RBP18.54■□□□□ 0.56
CSRP1-201ENST00000340006 GTF2E1P29083 439 aaPredicted RBP18.54■□□□□ 0.56
CSRP1-201ENST00000340006 PARP10Q53GL7 1025 aa18.54■□□□□ 0.56
CSRP1-201ENST00000340006 BCORQ6W2J9 1755 aa18.53■□□□□ 0.56
CSRP1-201ENST00000340006 NBPF7P0C2Y1 421 aaPredicted RBP18.53■□□□□ 0.56
CSRP1-201ENST00000340006 R3HDM1Q15032 1099 aaKnown RBP18.53■□□□□ 0.56
CSRP1-201ENST00000340006 SUSD4Q5VX71 490 aa18.53■□□□□ 0.56
CSRP1-201ENST00000340006 ANKRD36CQ5JPF3 1778 aa18.53■□□□□ 0.56
CSRP1-201ENST00000340006 UBE3BQ7Z3V4 1068 aa18.53■□□□□ 0.56
CSRP1-201ENST00000340006 FAM89AQ96GI7 184 aa18.53■□□□□ 0.56
CSRP1-201ENST00000340006 UTP14AQ9BVJ6 771 aaKnown RBP18.53■□□□□ 0.56
CSRP1-201ENST00000340006 HDAC5Q9UQL6 1122 aa18.53■□□□□ 0.56
CSRP1-201ENST00000340006 MSL1Q68DK7 614 aa18.52■□□□□ 0.56
CSRP1-201ENST00000340006 PDGFDQ9GZP0 370 aaPredicted RBP18.52■□□□□ 0.56
CSRP1-201ENST00000340006 ZBTB40Q9NUA8 1239 aa18.52■□□□□ 0.56
CSRP1-201ENST00000340006 UBN2Q6ZU65 1347 aa18.52■□□□□ 0.56
CSRP1-201ENST00000340006 KCNA4P22459 653 aa18.51■□□□□ 0.55
CSRP1-201ENST00000340006 NFIXQ14938 502 aa18.51■□□□□ 0.55
CSRP1-201ENST00000340006 GNAI2P04899 355 aa18.51■□□□□ 0.55
CSRP1-201ENST00000340006 TPTE2Q6XPS3 522 aa18.51■□□□□ 0.55
CSRP1-201ENST00000340006 NBPF5PQ86XG9 351 aaPredicted RBP18.51■□□□□ 0.55
CSRP1-201ENST00000340006 ZBTB38Q8NAP3 1195 aaPredicted RBP18.51■□□□□ 0.55
CSRP1-201ENST00000340006 C1orf115Q9H7X2 142 aa18.51■□□□□ 0.55
CSRP1-201ENST00000340006 H7C1W4 665 aa18.5■□□□□ 0.55
CSRP1-201ENST00000340006 AAMPQ13685 434 aa18.5■□□□□ 0.55
CSRP1-201ENST00000340006 SCN7AQ01118 1682 aa18.5■□□□□ 0.55
CSRP1-201ENST00000340006 N4BP2Q86UW6 1770 aaPredicted RBP18.5■□□□□ 0.55
CSRP1-201ENST00000340006 PSDA5PKW4 1024 aaPredicted RBP18.5■□□□□ 0.55
CSRP1-201ENST00000340006 TM4SF1P30408 202 aa18.5■□□□□ 0.55
CSRP1-201ENST00000340006 NYXQ9GZU5 481 aa18.5■□□□□ 0.55
CSRP1-201ENST00000340006 QSER1Q2KHR3 1735 aa18.49■□□□□ 0.55
CSRP1-201ENST00000340006 PCCAP05165 728 aaPredicted RBP18.49■□□□□ 0.55
CSRP1-201ENST00000340006 SYNE4Q8N205 404 aa18.49■□□□□ 0.55
CSRP1-201ENST00000340006 LRRFIP2Q9Y608 721 aaKnown RBP18.49■□□□□ 0.55
CSRP1-201ENST00000340006 NUTM1Q86Y26 1132 aa18.48■□□□□ 0.55
CSRP1-201ENST00000340006 SLC16A10Q8TF71 515 aa18.48■□□□□ 0.55
CSRP1-201ENST00000340006 PARP3Q9Y6F1 533 aa18.48■□□□□ 0.55
CSRP1-201ENST00000340006 UTYO14607 1347 aa18.47■□□□□ 0.55
CSRP1-201ENST00000340006 SH3TC1Q8TE82 1336 aa18.47■□□□□ 0.55
CSRP1-201ENST00000340006 SERPINB2P05120 415 aa18.47■□□□□ 0.55
CSRP1-201ENST00000340006 MMP10P09238 476 aa18.47■□□□□ 0.55
CSRP1-201ENST00000340006 B4GALNT3Q6L9W6 998 aa18.47■□□□□ 0.55
CSRP1-201ENST00000340006 CARMIL3Q8ND23 1372 aa18.47■□□□□ 0.55
CSRP1-201ENST00000340006 IRS4O14654 1257 aaPredicted RBP18.46■□□□□ 0.55
CSRP1-201ENST00000340006 SUCLG2Q96I99 432 aa18.46■□□□□ 0.55
CSRP1-201ENST00000340006 NTSR2O95665 410 aa18.46■□□□□ 0.55
CSRP1-201ENST00000340006 ERFEQ4G0M1 354 aa18.46■□□□□ 0.55
CSRP1-201ENST00000340006 CCDC24Q8N4L8 307 aa18.46■□□□□ 0.55
CSRP1-201ENST00000340006 ZBTB7AO95365 584 aa18.45■□□□□ 0.54
CSRP1-201ENST00000340006 HCLS1P14317 486 aaPredicted RBP18.45■□□□□ 0.54
CSRP1-201ENST00000340006 HSP90B1P14625 803 aaKnown RBP18.45■□□□□ 0.54
CSRP1-201ENST00000340006 CCDC136Q96JN2 1154 aa18.45■□□□□ 0.54
CSRP1-201ENST00000340006 CASP7P55210 303 aa18.44■□□□□ 0.54
CSRP1-201ENST00000340006 CNBD1Q8NA66 436 aa18.44■□□□□ 0.54
CSRP1-201ENST00000340006 BICC1Q9H694 974 aaKnown RBP18.44■□□□□ 0.54
CSRP1-201ENST00000340006 ATF5Q9Y2D1 282 aaPredicted RBP18.44■□□□□ 0.54
CSRP1-201ENST00000340006 PCDHB15Q9Y5E8 787 aa18.44■□□□□ 0.54
CSRP1-201ENST00000340006 IBTKQ9P2D0 1353 aaPredicted RBP18.44■□□□□ 0.54
CSRP1-201ENST00000340006 POLRMTO00411 1230 aaKnown RBP18.44■□□□□ 0.54
CSRP1-201ENST00000340006 DDR1Q08345 913 aa18.44■□□□□ 0.54
CSRP1-201ENST00000340006 CHMP3Q9Y3E7 222 aa18.44■□□□□ 0.54
CSRP1-201ENST00000340006 RPAP2Q8IXW5 612 aaPredicted RBP18.43■□□□□ 0.54
CSRP1-201ENST00000340006 CDHR2Q9BYE9 1310 aa18.43■□□□□ 0.54
CSRP1-201ENST00000340006 PDE8AO60658 829 aa18.42■□□□□ 0.54
CSRP1-201ENST00000340006 ST5P78524 1137 aa18.42■□□□□ 0.54
CSRP1-201ENST00000340006 SOCS7O14512 581 aa18.42■□□□□ 0.54
CSRP1-201ENST00000340006 EPHA10Q5JZY3 1008 aa18.42■□□□□ 0.54
CSRP1-201ENST00000340006 LMBR1LQ6UX01 489 aa18.42■□□□□ 0.54
CSRP1-201ENST00000340006 KAZALD1Q96I82 304 aa18.42■□□□□ 0.54
CSRP1-201ENST00000340006 FOXO4P98177 505 aa18.41■□□□□ 0.54
CSRP1-201ENST00000340006 ATP8B2P98198 1209 aa18.41■□□□□ 0.54
CSRP1-201ENST00000340006 PRR5LQ6MZQ0 368 aa18.41■□□□□ 0.54
CSRP1-201ENST00000340006 NLRP3Q96P20 1036 aa18.41■□□□□ 0.54
CSRP1-201ENST00000340006 CCDC85AQ96PX6 553 aaPredicted RBP18.41■□□□□ 0.54
CSRP1-201ENST00000340006 MTFR1LQ9H019 292 aa18.41■□□□□ 0.54
CSRP1-201ENST00000340006 SRGAP3O43295 1099 aa18.41■□□□□ 0.54
CSRP1-201ENST00000340006 CEP85Q6P2H3 762 aa18.41■□□□□ 0.54
CSRP1-201ENST00000340006 RWDD1Q9H446 243 aaPredicted RBP18.41■□□□□ 0.54
CSRP1-201ENST00000340006 SLC10A5Q5PT55 438 aa18.4■□□□□ 0.54
CSRP1-201ENST00000340006 ANKRD44Q8N8A2 993 aa18.4■□□□□ 0.54
CSRP1-201ENST00000340006 HMMRO75330 724 aa18.39■□□□□ 0.53
CSRP1-201ENST00000340006 POLD1P28340 1107 aa18.39■□□□□ 0.53
CSRP1-201ENST00000340006 PLA2G12BQ9BX93 195 aa18.39■□□□□ 0.53
CSRP1-201ENST00000340006 PNMA6EA0A0J9YXQ4 647 aa18.38■□□□□ 0.53
CSRP1-201ENST00000340006 CTSWP56202 376 aa18.38■□□□□ 0.53
CSRP1-201ENST00000340006 TTLL11Q8NHH1 800 aa18.38■□□□□ 0.53
CSRP1-201ENST00000340006 COL24A1Q17RW2 1714 aa18.38■□□□□ 0.53
CSRP1-201ENST00000340006 MYH3P11055 1940 aa18.37■□□□□ 0.53
CSRP1-201ENST00000340006 CCDC57Q2TAC2 916 aa18.37■□□□□ 0.53
CSRP1-201ENST00000340006 SIRT2Q8IXJ6 389 aa18.37■□□□□ 0.53
CSRP1-201ENST00000340006 CSF1RP07333 972 aa18.37■□□□□ 0.53
CSRP1-201ENST00000340006 CCDC152Q4G0S7 254 aa18.37■□□□□ 0.53
CSRP1-201ENST00000340006 IGHDP01880 384 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms