RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 UBAC1Q9BSL1 405 aa18.6■□□□□ 0.57
NPHP3-201ENST00000337331 CFAP100Q494V2 611 aa18.6■□□□□ 0.57
NPHP3-201ENST00000337331 CDK5RAP3Q96JB5 506 aa18.6■□□□□ 0.57
NPHP3-201ENST00000337331 DACH1Q9UI36 760 aa18.6■□□□□ 0.57
NPHP3-201ENST00000337331 ASXL1Q8IXJ9 1541 aa18.6■□□□□ 0.57
NPHP3-201ENST00000337331 OAS2P29728 719 aaKnown RBP18.59■□□□□ 0.57
NPHP3-201ENST00000337331 C8orf58Q8NAV2 365 aa18.59■□□□□ 0.57
NPHP3-201ENST00000337331 CARD14Q9BXL6 1004 aa18.59■□□□□ 0.57
NPHP3-201ENST00000337331 ST7Q9NRC1 585 aa18.59■□□□□ 0.57
NPHP3-201ENST00000337331 SLFN14P0C7P3 912 aa18.59■□□□□ 0.57
NPHP3-201ENST00000337331 IFIT1P09914 478 aaKnown RBP18.59■□□□□ 0.57
NPHP3-201ENST00000337331 TMC6Q7Z403 805 aa18.59■□□□□ 0.57
NPHP3-201ENST00000337331 PHF8Q9UPP1 1060 aa18.59■□□□□ 0.57
NPHP3-201ENST00000337331 JRKLQ9Y4A0 524 aa18.58■□□□□ 0.57
NPHP3-201ENST00000337331 AMOTQ4VCS5 1084 aa18.58■□□□□ 0.57
NPHP3-201ENST00000337331 SRRTQ9BXP5 876 aaKnown RBP18.58■□□□□ 0.57
NPHP3-201ENST00000337331 ZNHIT6Q9NWK9 470 aaKnown RBP18.58■□□□□ 0.57
NPHP3-201ENST00000337331 CBFA2T2O43439 604 aa18.58■□□□□ 0.56
NPHP3-201ENST00000337331 MYO1CO00159 1063 aa18.58■□□□□ 0.56
NPHP3-201ENST00000337331 METTL24Q5JXM2 366 aa18.58■□□□□ 0.56
NPHP3-201ENST00000337331 ICE2Q659A1 982 aa18.58■□□□□ 0.56
NPHP3-201ENST00000337331 LRP2BPQ9P2M1 347 aa18.58■□□□□ 0.56
NPHP3-201ENST00000337331 ABCF2Q9UG63 623 aa18.57■□□□□ 0.56
NPHP3-201ENST00000337331 MAP2K2P36507 400 aa18.57■□□□□ 0.56
NPHP3-201ENST00000337331 FBXO38Q6PIJ6 1188 aa18.57■□□□□ 0.56
NPHP3-201ENST00000337331 AIDAQ96BJ3 306 aa18.57■□□□□ 0.56
NPHP3-201ENST00000337331 NRBP1Q9UHY1 535 aa18.57■□□□□ 0.56
NPHP3-201ENST00000337331 FANCAO15360 1455 aa18.57■□□□□ 0.56
NPHP3-201ENST00000337331 ANKRD44Q8N8A2 993 aa18.57■□□□□ 0.56
NPHP3-201ENST00000337331 POLR3AO14802 1390 aaPredicted RBP18.57■□□□□ 0.56
NPHP3-201ENST00000337331 A0A087WZG4 1122 aa18.56■□□□□ 0.56
NPHP3-201ENST00000337331 PDE1AP54750 535 aa18.56■□□□□ 0.56
NPHP3-201ENST00000337331 ACEP12821 1306 aa18.56■□□□□ 0.56
NPHP3-201ENST00000337331 TTC21BQ7Z4L5 1316 aa18.56■□□□□ 0.56
NPHP3-201ENST00000337331 GJB2P29033 226 aa18.56■□□□□ 0.56
NPHP3-201ENST00000337331 BRD1O95696 1058 aa18.56■□□□□ 0.56
NPHP3-201ENST00000337331 CCAR1Q8IX12 1150 aaKnown RBP18.56■□□□□ 0.56
NPHP3-201ENST00000337331 RAI14Q9P0K7 980 aa18.56■□□□□ 0.56
NPHP3-201ENST00000337331 MORC2Q9Y6X9 1032 aaPredicted RBP18.56■□□□□ 0.56
NPHP3-201ENST00000337331 CEBPAP49715 358 aaPredicted RBP18.55■□□□□ 0.56
NPHP3-201ENST00000337331 GSDMDP57764 484 aa18.55■□□□□ 0.56
NPHP3-201ENST00000337331 C8orf76Q96K31 380 aa18.55■□□□□ 0.56
NPHP3-201ENST00000337331 DDX19AQ9NUU7 478 aaKnown RBP18.55■□□□□ 0.56
NPHP3-201ENST00000337331 ANO10Q9NW15 660 aa18.55■□□□□ 0.56
NPHP3-201ENST00000337331 GNG11P61952 73 aa18.55■□□□□ 0.56
NPHP3-201ENST00000337331 CCT2P78371 535 aaKnown RBP18.55■□□□□ 0.56
NPHP3-201ENST00000337331 RHPN1Q8TCX5 695 aa18.55■□□□□ 0.56
NPHP3-201ENST00000337331 EVI5LQ96CN4 794 aa18.55■□□□□ 0.56
NPHP3-201ENST00000337331 FEZ2Q9UHY8 353 aaPredicted RBP18.55■□□□□ 0.56
NPHP3-201ENST00000337331 STIM1Q13586 685 aa18.55■□□□□ 0.56
NPHP3-201ENST00000337331 PLEKHM2Q8IWE5 1019 aa18.55■□□□□ 0.56
NPHP3-201ENST00000337331 TSPYL6Q8N831 410 aa18.55■□□□□ 0.56
NPHP3-201ENST00000337331 RRP15Q9Y3B9 282 aaKnown RBP18.55■□□□□ 0.56
NPHP3-201ENST00000337331 ATP2B2Q01814 1243 aa18.54■□□□□ 0.56
NPHP3-201ENST00000337331 USP16Q9Y5T5 823 aa18.54■□□□□ 0.56
NPHP3-201ENST00000337331 F13A1P00488 732 aa18.54■□□□□ 0.56
NPHP3-201ENST00000337331 CCDC82Q8N4S0 544 aa18.54■□□□□ 0.56
NPHP3-201ENST00000337331 HYPKQ9NX55 129 aa18.54■□□□□ 0.56
NPHP3-201ENST00000337331 MAP3K2Q9Y2U5 619 aa18.54■□□□□ 0.56
NPHP3-201ENST00000337331 TRMT2AQ8IZ69 625 aaKnown RBP18.54■□□□□ 0.56
NPHP3-201ENST00000337331 MRPL50Q8N5N7 158 aaKnown RBP18.54■□□□□ 0.56
NPHP3-201ENST00000337331 PPM1EQ8WY54 764 aa18.54■□□□□ 0.56
NPHP3-201ENST00000337331 ZNF521Q96K83 1311 aa18.54■□□□□ 0.56
NPHP3-201ENST00000337331 TEX14Q8IWB6 1497 aa18.54■□□□□ 0.56
NPHP3-201ENST00000337331 KMT5BQ4FZB7 885 aa18.53■□□□□ 0.56
NPHP3-201ENST00000337331 POLKQ9UBT6 870 aa18.53■□□□□ 0.56
NPHP3-201ENST00000337331 PPFIA3O75145 1194 aa18.53■□□□□ 0.56
NPHP3-201ENST00000337331 KRT18P05783 430 aaKnown RBP18.53■□□□□ 0.56
NPHP3-201ENST00000337331 SMC1AQ14683 1233 aaKnown RBP18.53■□□□□ 0.56
NPHP3-201ENST00000337331 ANKRD7Q92527 254 aa18.53■□□□□ 0.56
NPHP3-201ENST00000337331 SMARCC1Q92922 1105 aaPredicted RBP18.53■□□□□ 0.56
NPHP3-201ENST00000337331 EVCP57679 992 aa18.53■□□□□ 0.56
NPHP3-201ENST00000337331 RGS22Q8NE09 1264 aa18.53■□□□□ 0.56
NPHP3-201ENST00000337331 FAM107BQ9H098 131 aa18.53■□□□□ 0.56
NPHP3-201ENST00000337331 KDM5BQ9UGL1 1544 aa18.53■□□□□ 0.56
NPHP3-201ENST00000337331 PLCD4Q9BRC7 762 aa18.53■□□□□ 0.56
NPHP3-201ENST00000337331 TRIM66O15016 1216 aa18.52■□□□□ 0.56
NPHP3-201ENST00000337331 VAMP4O75379 141 aa18.52■□□□□ 0.56
NPHP3-201ENST00000337331 MYCNP04198 464 aaPredicted RBP18.52■□□□□ 0.56
NPHP3-201ENST00000337331 ZNF75DP51815 510 aa18.52■□□□□ 0.56
NPHP3-201ENST00000337331 SPTLC3Q9NUV7 552 aa18.52■□□□□ 0.56
NPHP3-201ENST00000337331 AKAP2Q9Y2D5 859 aa18.52■□□□□ 0.56
NPHP3-201ENST00000337331 ZMYM3Q14202 1370 aa18.52■□□□□ 0.56
NPHP3-201ENST00000337331 SHTN1A0MZ66 631 aa18.52■□□□□ 0.55
NPHP3-201ENST00000337331 TICAM2Q86XR7 235 aa18.52■□□□□ 0.55
NPHP3-201ENST00000337331 TCEANC2Q96MN5 208 aa18.52■□□□□ 0.55
NPHP3-201ENST00000337331 ZSCAN12O43309 604 aa18.51■□□□□ 0.55
NPHP3-201ENST00000337331 ZNF622Q969S3 477 aaKnown RBP eCLIP18.51■□□□□ 0.55
NPHP3-201ENST00000337331 ZHX3Q9H4I2 956 aa18.51■□□□□ 0.55
NPHP3-201ENST00000337331 CBX8Q9HC52 389 aa18.51■□□□□ 0.55
NPHP3-201ENST00000337331 HMGB1P09429 215 aaKnown RBP18.51■□□□□ 0.55
NPHP3-201ENST00000337331 UBE3BQ7Z3V4 1068 aa18.51■□□□□ 0.55
NPHP3-201ENST00000337331 OTUD7AQ8TE49 926 aaPredicted RBP18.51■□□□□ 0.55
NPHP3-201ENST00000337331 CARD6Q9BX69 1037 aa18.51■□□□□ 0.55
NPHP3-201ENST00000337331 ZRANB1Q9UGI0 708 aa18.51■□□□□ 0.55
NPHP3-201ENST00000337331 ANKRD65E5RJM6 399 aa18.51■□□□□ 0.55
NPHP3-201ENST00000337331 STARD3NLO95772 234 aa18.51■□□□□ 0.55
NPHP3-201ENST00000337331 SYT1P21579 422 aa18.51■□□□□ 0.55
NPHP3-201ENST00000337331 ATP6V1AP38606 617 aa18.51■□□□□ 0.55
NPHP3-201ENST00000337331 KRT24Q2M2I5 525 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms