RNA–Protein interactions for RNA: ENST00000334271.7

AP1S3-201, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 2

Gene AP1S3, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-201ENST00000334271 F6X3S4 739 aa12.92□□□□□ -0.34
AP1S3-201ENST00000334271 MARCH6O60337 910 aa12.92□□□□□ -0.34
AP1S3-201ENST00000334271 MARCH10Q8NA82 808 aaPredicted RBP12.92□□□□□ -0.34
AP1S3-201ENST00000334271 FBXW7Q969H0 707 aa12.92□□□□□ -0.34
AP1S3-201ENST00000334271 TRIM28Q13263 835 aaKnown RBP12.92□□□□□ -0.34
AP1S3-201ENST00000334271 RIC3Q7Z5B4 369 aa12.92□□□□□ -0.34
AP1S3-201ENST00000334271 PDZRN3Q9UPQ7 1066 aa12.92□□□□□ -0.34
AP1S3-201ENST00000334271 RAB11FIP3O75154 756 aa12.91□□□□□ -0.34
AP1S3-201ENST00000334271 ZBTB47Q9UFB7 747 aaPredicted RBP12.91□□□□□ -0.34
AP1S3-201ENST00000334271 HSP90AB3PQ58FF7 597 aa12.9□□□□□ -0.34
AP1S3-201ENST00000334271 COPS6Q7L5N1 327 aa12.9□□□□□ -0.34
AP1S3-201ENST00000334271 CHD1LQ86WJ1 897 aa12.9□□□□□ -0.34
AP1S3-201ENST00000334271 SIRT2Q8IXJ6 389 aa12.9□□□□□ -0.34
AP1S3-201ENST00000334271 SSH3Q8TE77 659 aa12.9□□□□□ -0.34
AP1S3-201ENST00000334271 XAGE3Q8WTP9 111 aa12.9□□□□□ -0.34
AP1S3-201ENST00000334271 AFF2P51816 1311 aa12.9□□□□□ -0.34
AP1S3-201ENST00000334271 ECM2O94769 699 aaPredicted RBP12.9□□□□□ -0.34
AP1S3-201ENST00000334271 PROSER3Q2NL68 480 aa12.9□□□□□ -0.34
AP1S3-201ENST00000334271 FAM161AQ3B820 660 aa12.9□□□□□ -0.34
AP1S3-201ENST00000334271 COL5A3P25940 1745 aaPredicted RBP12.9□□□□□ -0.34
AP1S3-201ENST00000334271 AFDNP55196 1824 aaKnown RBP12.89□□□□□ -0.35
AP1S3-201ENST00000334271 GRM8O00222 908 aa12.89□□□□□ -0.35
AP1S3-201ENST00000334271 IL6STP40189 918 aaPredicted RBP12.89□□□□□ -0.35
AP1S3-201ENST00000334271 PRIM1P49642 420 aaKnown RBP12.89□□□□□ -0.35
AP1S3-201ENST00000334271 SPATA32Q96LK8 384 aa12.89□□□□□ -0.35
AP1S3-201ENST00000334271 PRAMEF22A3QJZ6 481 aa12.89□□□□□ -0.35
AP1S3-201ENST00000334271 ERVV-1B6SEH8 477 aa12.89□□□□□ -0.35
AP1S3-201ENST00000334271 TPD52L2O43399 206 aaKnown RBP12.89□□□□□ -0.35
AP1S3-201ENST00000334271 IRF5Q13568 498 aa12.89□□□□□ -0.35
AP1S3-201ENST00000334271 POLA2Q14181 598 aa12.89□□□□□ -0.35
AP1S3-201ENST00000334271 C9orf78Q9NZ63 289 aaPredicted RBP12.89□□□□□ -0.35
AP1S3-201ENST00000334271 ASAP1Q9ULH1 1129 aa12.89□□□□□ -0.35
AP1S3-201ENST00000334271 ANKRD36CQ5JPF3 1778 aa12.88□□□□□ -0.35
AP1S3-201ENST00000334271 CYP19A1P11511 503 aaPredicted RBP12.88□□□□□ -0.35
AP1S3-201ENST00000334271 ZNF772Q68DY9 489 aaPredicted RBP12.88□□□□□ -0.35
AP1S3-201ENST00000334271 CCDC191Q8NCU4 936 aa12.88□□□□□ -0.35
AP1S3-201ENST00000334271 PPME1Q9Y570 386 aa12.88□□□□□ -0.35
AP1S3-201ENST00000334271 NEURL1BA8MQ27 555 aa12.88□□□□□ -0.35
AP1S3-201ENST00000334271 NBPF26B4DH59 902 aa12.88□□□□□ -0.35
AP1S3-201ENST00000334271 FAM98CQ17RN3 349 aaKnown RBP12.88□□□□□ -0.35
AP1S3-201ENST00000334271 NBPF14Q5TI25 921 aa12.88□□□□□ -0.35
AP1S3-201ENST00000334271 NBPF10Q6P3W6 841 aaKnown RBP12.88□□□□□ -0.35
AP1S3-201ENST00000334271 KIF6Q6ZMV9 814 aa12.88□□□□□ -0.35
AP1S3-201ENST00000334271 NBPF15Q8N660 670 aa12.88□□□□□ -0.35
AP1S3-201ENST00000334271 BACH2Q9BYV9 841 aa12.88□□□□□ -0.35
AP1S3-201ENST00000334271 GCKRQ14397 625 aa12.87□□□□□ -0.35
AP1S3-201ENST00000334271 NOP58Q9Y2X3 529 aaKnown RBP12.87□□□□□ -0.35
AP1S3-201ENST00000334271 SBF2Q86WG5 1849 aa12.87□□□□□ -0.35
AP1S3-201ENST00000334271 A0A087WZG4 1122 aa12.86□□□□□ -0.35
AP1S3-201ENST00000334271 PTCD1O75127 700 aaKnown RBP12.86□□□□□ -0.35
AP1S3-201ENST00000334271 ERC1Q8IUD2 1116 aa12.86□□□□□ -0.35
AP1S3-201ENST00000334271 NME8Q8N427 588 aa12.86□□□□□ -0.35
AP1S3-201ENST00000334271 LY75O60449 1722 aa12.86□□□□□ -0.35
AP1S3-201ENST00000334271 MYL6BP14649 208 aa12.86□□□□□ -0.35
AP1S3-201ENST00000334271 PDE4AP27815 886 aa12.86□□□□□ -0.35
AP1S3-201ENST00000334271 AOX1Q06278 1338 aa12.86□□□□□ -0.35
AP1S3-201ENST00000334271 RC3H1Q5TC82 1133 aaKnown RBP12.86□□□□□ -0.35
AP1S3-201ENST00000334271 PALLDQ8WX93 1383 aa12.86□□□□□ -0.35
AP1S3-201ENST00000334271 APBB1IPQ7Z5R6 666 aaPredicted RBP12.85□□□□□ -0.35
AP1S3-201ENST00000334271 RBM27Q9P2N5 1060 aaKnown RBP12.85□□□□□ -0.35
AP1S3-201ENST00000334271 LRRFIP2Q9Y608 721 aaKnown RBP12.85□□□□□ -0.35
AP1S3-201ENST00000334271 MAP3K15Q6ZN16 1313 aa12.85□□□□□ -0.35
AP1S3-201ENST00000334271 IGKV5-2P06315 115 aa12.85□□□□□ -0.35
AP1S3-201ENST00000334271 BMP2KLQ5H9B9 411 aa12.85□□□□□ -0.35
AP1S3-201ENST00000334271 DNAJC10Q8IXB1 793 aa12.85□□□□□ -0.35
AP1S3-201ENST00000334271 AK7Q96M32 723 aa12.85□□□□□ -0.35
AP1S3-201ENST00000334271 RBM42Q9BTD8 480 aaKnown RBP12.85□□□□□ -0.35
AP1S3-201ENST00000334271 OSBPL3Q9H4L5 887 aa12.85□□□□□ -0.35
AP1S3-201ENST00000334271 BTAF1O14981 1849 aa12.84□□□□□ -0.35
AP1S3-201ENST00000334271 CNTNAP4Q9C0A0 1308 aa12.84□□□□□ -0.35
AP1S3-201ENST00000334271 LOC102724428A0A0B4J2F2 783 aa12.84□□□□□ -0.35
AP1S3-201ENST00000334271 SIK1P57059 783 aa12.84□□□□□ -0.35
AP1S3-201ENST00000334271 AIMP1Q12904 312 aaKnown RBP12.84□□□□□ -0.35
AP1S3-201ENST00000334271 TCIRG1Q13488 830 aa12.84□□□□□ -0.35
AP1S3-201ENST00000334271 AXDND1Q5T1B0 1012 aaPredicted RBP12.84□□□□□ -0.35
AP1S3-201ENST00000334271 ANKRD45Q5TZF3 282 aa12.84□□□□□ -0.35
AP1S3-201ENST00000334271 RINLQ6ZS11 566 aa12.84□□□□□ -0.35
AP1S3-201ENST00000334271 ISCA1Q9BUE6 129 aa12.84□□□□□ -0.35
AP1S3-201ENST00000334271 CWC25Q9NXE8 425 aaPredicted RBP12.84□□□□□ -0.35
AP1S3-201ENST00000334271 H7C1W4 665 aa12.84□□□□□ -0.35
AP1S3-201ENST00000334271 ANXA1P04083 346 aa12.84□□□□□ -0.35
AP1S3-201ENST00000334271 RABL6Q3YEC7 729 aaPredicted RBP12.84□□□□□ -0.35
AP1S3-201ENST00000334271 RETREG2Q8NC44 543 aa12.84□□□□□ -0.35
AP1S3-201ENST00000334271 CCDC87Q9NVE4 849 aa12.84□□□□□ -0.35
AP1S3-201ENST00000334271 A1BGP04217 495 aa12.83□□□□□ -0.36
AP1S3-201ENST00000334271 GIGYF2Q6Y7W6 1299 aaKnown RBP12.83□□□□□ -0.36
AP1S3-201ENST00000334271 MYD88Q99836 296 aa12.83□□□□□ -0.36
AP1S3-201ENST00000334271 LRRCC1Q9C099 1032 aa12.83□□□□□ -0.36
AP1S3-201ENST00000334271 SUGT1Q9Y2Z0 365 aa12.83□□□□□ -0.36
AP1S3-201ENST00000334271 NBPF7P0C2Y1 421 aaPredicted RBP12.82□□□□□ -0.36
AP1S3-201ENST00000334271 SYTL4Q96C24 671 aaPredicted RBP12.82□□□□□ -0.36
AP1S3-201ENST00000334271 KIF1BPQ96EK5 621 aa12.82□□□□□ -0.36
AP1S3-201ENST00000334271 PLA2G12BQ9BX93 195 aa12.82□□□□□ -0.36
AP1S3-201ENST00000334271 QTRT2Q9H974 415 aaKnown RBP12.82□□□□□ -0.36
AP1S3-201ENST00000334271 BCORQ6W2J9 1755 aa12.82□□□□□ -0.36
AP1S3-201ENST00000334271 CDHR2Q9BYE9 1310 aa12.82□□□□□ -0.36
AP1S3-201ENST00000334271 EIF5P55010 431 aaKnown RBP12.82□□□□□ -0.36
AP1S3-201ENST00000334271 GORABQ5T7V8 394 aa12.82□□□□□ -0.36
AP1S3-201ENST00000334271 FAM196AQ6ZSG2 479 aa12.82□□□□□ -0.36
AP1S3-201ENST00000334271 TSHZ1Q6ZSZ6 1077 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms