RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 PTPN12Q05209 780 aaKnown RBP18.26■□□□□ 0.51
TPM3-205ENST00000328159 TRIM28Q13263 835 aaKnown RBP18.26■□□□□ 0.51
TPM3-205ENST00000328159 LMBR1LQ6UX01 489 aa18.26■□□□□ 0.51
TPM3-205ENST00000328159 SNX21Q969T3 373 aa18.26■□□□□ 0.51
TPM3-205ENST00000328159 ECHDC1Q9NTX5 307 aa18.26■□□□□ 0.51
TPM3-205ENST00000328159 SPATA31A6Q5VVP1 1343 aa18.25■□□□□ 0.51
TPM3-205ENST00000328159 FAM98CQ17RN3 349 aaKnown RBP18.25■□□□□ 0.51
TPM3-205ENST00000328159 HSCBQ8IWL3 235 aa18.25■□□□□ 0.51
TPM3-205ENST00000328159 ZBTB1Q9Y2K1 713 aa18.25■□□□□ 0.51
TPM3-205ENST00000328159 MAP4K4O95819 1239 aaPredicted RBP18.25■□□□□ 0.51
TPM3-205ENST00000328159 RTL5Q5HYW3 569 aaPredicted RBP18.25■□□□□ 0.51
TPM3-205ENST00000328159 FNBP4Q8N3X1 1017 aaPredicted RBP18.25■□□□□ 0.51
TPM3-205ENST00000328159 EAF2Q96CJ1 260 aaPredicted RBP18.25■□□□□ 0.51
TPM3-205ENST00000328159 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.25■□□□□ 0.51
TPM3-205ENST00000328159 ANKRD36CQ5JPF3 1778 aa18.24■□□□□ 0.51
TPM3-205ENST00000328159 GIGYF2Q6Y7W6 1299 aaKnown RBP18.24■□□□□ 0.51
TPM3-205ENST00000328159 CNTROBQ8N137 903 aa18.24■□□□□ 0.51
TPM3-205ENST00000328159 CERKQ8TCT0 537 aa18.24■□□□□ 0.51
TPM3-205ENST00000328159 ARXQ96QS3 562 aa18.24■□□□□ 0.51
TPM3-205ENST00000328159 CICQ96RK0 1608 aaPredicted RBP18.23■□□□□ 0.51
TPM3-205ENST00000328159 IL6STP40189 918 aaPredicted RBP18.23■□□□□ 0.51
TPM3-205ENST00000328159 NBR1Q14596 966 aa18.23■□□□□ 0.51
TPM3-205ENST00000328159 CHMP3Q9Y3E7 222 aa18.22■□□□□ 0.51
TPM3-205ENST00000328159 NUP98P52948 1817 aa18.22■□□□□ 0.51
TPM3-205ENST00000328159 PCCAP05165 728 aaPredicted RBP18.22■□□□□ 0.51
TPM3-205ENST00000328159 HSP90AB3PQ58FF7 597 aa18.22■□□□□ 0.51
TPM3-205ENST00000328159 CCDC8Q9H0W5 538 aaPredicted RBP18.22■□□□□ 0.51
TPM3-205ENST00000328159 RREB1Q92766 1687 aa18.21■□□□□ 0.51
TPM3-205ENST00000328159 ATP6V1AP38606 617 aa18.21■□□□□ 0.51
TPM3-205ENST00000328159 HLFQ16534 295 aa18.21■□□□□ 0.51
TPM3-205ENST00000328159 PALLDQ8WX93 1383 aa18.2■□□□□ 0.5
TPM3-205ENST00000328159 LOC102724428A0A0B4J2F2 783 aa18.2■□□□□ 0.5
TPM3-205ENST00000328159 SIK1P57059 783 aa18.2■□□□□ 0.5
TPM3-205ENST00000328159 TFCP2Q12800 502 aa18.2■□□□□ 0.5
TPM3-205ENST00000328159 RABEP1Q15276 862 aa18.2■□□□□ 0.5
TPM3-205ENST00000328159 SMARCC1Q92922 1105 aaPredicted RBP18.2■□□□□ 0.5
TPM3-205ENST00000328159 TLR7Q9NYK1 1049 aaKnown RBP18.2■□□□□ 0.5
TPM3-205ENST00000328159 USP21Q9UK80 565 aa18.2■□□□□ 0.5
TPM3-205ENST00000328159 INTS5Q6P9B9 1019 aaKnown RBP18.19■□□□□ 0.5
TPM3-205ENST00000328159 DZIP3Q86Y13 1208 aaKnown RBP18.19■□□□□ 0.5
TPM3-205ENST00000328159 SLKQ9H2G2 1235 aaPredicted RBP18.19■□□□□ 0.5
TPM3-205ENST00000328159 CCDC87Q9NVE4 849 aa18.19■□□□□ 0.5
TPM3-205ENST00000328159 ERVV-1B6SEH8 477 aa18.19■□□□□ 0.5
TPM3-205ENST00000328159 TNNI3KQ59H18 835 aa18.19■□□□□ 0.5
TPM3-205ENST00000328159 ZBTB38Q8NAP3 1195 aaPredicted RBP18.19■□□□□ 0.5
TPM3-205ENST00000328159 PLA2G12BQ9BX93 195 aa18.19■□□□□ 0.5
TPM3-205ENST00000328159 ANTXR1Q9H6X2 564 aa18.19■□□□□ 0.5
TPM3-205ENST00000328159 FPGT-TNNI3KV9GXZ4 949 aa18.19■□□□□ 0.5
TPM3-205ENST00000328159 KCNQ2O43526 872 aa18.18■□□□□ 0.5
TPM3-205ENST00000328159 NLRP10Q86W26 655 aa18.18■□□□□ 0.5
TPM3-205ENST00000328159 THSD7AQ9UPZ6 1657 aa18.17■□□□□ 0.5
TPM3-205ENST00000328159 GPTP24298 496 aa18.17■□□□□ 0.5
TPM3-205ENST00000328159 CRKLP46109 303 aaKnown RBP18.17■□□□□ 0.5
TPM3-205ENST00000328159 EIF5P55010 431 aaKnown RBP18.17■□□□□ 0.5
TPM3-205ENST00000328159 ITPK1Q13572 414 aa18.17■□□□□ 0.5
TPM3-205ENST00000328159 EVI5LQ96CN4 794 aa18.17■□□□□ 0.5
TPM3-205ENST00000328159 FAM89AQ96GI7 184 aa18.17■□□□□ 0.5
TPM3-205ENST00000328159 ANO2Q9NQ90 1003 aa18.17■□□□□ 0.5
TPM3-205ENST00000328159 TBC1D2BQ9UPU7 963 aa18.17■□□□□ 0.5
TPM3-205ENST00000328159 CDHR2Q9BYE9 1310 aa18.17■□□□□ 0.5
TPM3-205ENST00000328159 ATG9AQ7Z3C6 839 aa18.17■□□□□ 0.5
TPM3-205ENST00000328159 SPRYD3Q8NCJ5 442 aa18.17■□□□□ 0.5
TPM3-205ENST00000328159 MYH14Q7Z406 1995 aaKnown RBP18.16■□□□□ 0.5
TPM3-205ENST00000328159 ZNF831Q5JPB2 1677 aa18.16■□□□□ 0.5
TPM3-205ENST00000328159 EPB41L2O43491 1005 aaKnown RBP18.16■□□□□ 0.5
TPM3-205ENST00000328159 CD2BP2O95400 341 aaKnown RBP18.16■□□□□ 0.5
TPM3-205ENST00000328159 MCCP23508 829 aa18.16■□□□□ 0.5
TPM3-205ENST00000328159 MYT1Q01538 1121 aa18.16■□□□□ 0.5
TPM3-205ENST00000328159 DBNLQ9UJU6 430 aaKnown RBP18.16■□□□□ 0.5
TPM3-205ENST00000328159 COL5A3P25940 1745 aaPredicted RBP18.16■□□□□ 0.5
TPM3-205ENST00000328159 EYA2O00167 538 aa18.15■□□□□ 0.5
TPM3-205ENST00000328159 SGSM2O43147 1006 aa18.15■□□□□ 0.5
TPM3-205ENST00000328159 IL15P40933 162 aaPredicted RBP18.15■□□□□ 0.5
TPM3-205ENST00000328159 IL25Q9H293 177 aa18.15■□□□□ 0.5
TPM3-205ENST00000328159 K7ELQ4 463 aaPredicted RBP18.14■□□□□ 0.5
TPM3-205ENST00000328159 CIAO1O76071 339 aa18.14■□□□□ 0.5
TPM3-205ENST00000328159 HSPA1LP34931 641 aa18.14■□□□□ 0.5
TPM3-205ENST00000328159 MEX3CQ5U5Q3 659 aaKnown RBP18.14■□□□□ 0.5
TPM3-205ENST00000328159 ZNF594Q96JF6 807 aaPredicted RBP18.14■□□□□ 0.5
TPM3-205ENST00000328159 GPR108Q9NPR9 543 aa18.14■□□□□ 0.5
TPM3-205ENST00000328159 DIAPH3Q9NSV4 1193 aa18.14■□□□□ 0.5
TPM3-205ENST00000328159 MYH3P11055 1940 aa18.14■□□□□ 0.49
TPM3-205ENST00000328159 CSF1RP07333 972 aa18.14■□□□□ 0.49
TPM3-205ENST00000328159 CCDC57Q2TAC2 916 aa18.14■□□□□ 0.49
TPM3-205ENST00000328159 ZNF34Q8IZ26 560 aa18.14■□□□□ 0.49
TPM3-205ENST00000328159 BOLA2Q9H3K6 86 aa18.14■□□□□ 0.49
TPM3-205ENST00000328159 ATP5JP18859 108 aa18.13■□□□□ 0.49
TPM3-205ENST00000328159 NFKBIBQ15653 356 aa18.13■□□□□ 0.49
TPM3-205ENST00000328159 RUFY2Q8WXA3 655 aa18.13■□□□□ 0.49
TPM3-205ENST00000328159 LRRC24Q50LG9 513 aa18.12■□□□□ 0.49
TPM3-205ENST00000328159 CWC27Q6UX04 472 aaKnown RBP18.12■□□□□ 0.49
TPM3-205ENST00000328159 SYNE4Q8N205 404 aa18.12■□□□□ 0.49
TPM3-205ENST00000328159 DBNDD2Q9BQY9 259 aa18.12■□□□□ 0.49
TPM3-205ENST00000328159 TRMT112Q9UI30 125 aaKnown RBP18.12■□□□□ 0.49
TPM3-205ENST00000328159 ANAPC15P60006 121 aa18.12■□□□□ 0.49
TPM3-205ENST00000328159 FBXO3Q9UK99 471 aa18.12■□□□□ 0.49
TPM3-205ENST00000328159 UBN2Q6ZU65 1347 aa18.11■□□□□ 0.49
TPM3-205ENST00000328159 NHSQ6T4R5 1651 aa18.11■□□□□ 0.49
TPM3-205ENST00000328159 HIP1O00291 1037 aa18.11■□□□□ 0.49
TPM3-205ENST00000328159 PUS3Q9BZE2 481 aaKnown RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms