RNA–Protein interactions for RNA: ENST00000323347.14

SMARCD2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2 BASIC

Gene SMARCD2, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-202ENST00000323347 ARXQ96QS3 562 aa19.05■□□□□ 0.64
SMARCD2-202ENST00000323347 ZSWIM6Q9HCJ5 1215 aa19.05■□□□□ 0.64
SMARCD2-202ENST00000323347 WDR33Q9C0J8 1336 aaKnown RBP19.04■□□□□ 0.64
SMARCD2-202ENST00000323347 MBD3O95983 291 aa19.04■□□□□ 0.64
SMARCD2-202ENST00000323347 AK2P54819 239 aa19.04■□□□□ 0.64
SMARCD2-202ENST00000323347 CASP7P55210 303 aa19.04■□□□□ 0.64
SMARCD2-202ENST00000323347 PTH1RQ03431 593 aa19.04■□□□□ 0.64
SMARCD2-202ENST00000323347 NKX1-1Q15270 411 aaPredicted RBP19.04■□□□□ 0.64
SMARCD2-202ENST00000323347 VPS53Q5VIR6 699 aa19.04■□□□□ 0.64
SMARCD2-202ENST00000323347 PLBD2Q8NHP8 589 aa19.04■□□□□ 0.64
SMARCD2-202ENST00000323347 MAP4K1Q92918 833 aa19.04■□□□□ 0.64
SMARCD2-202ENST00000323347 CCDC171Q6TFL3 1326 aa19.04■□□□□ 0.64
SMARCD2-202ENST00000323347 WDR17Q8IZU2 1322 aa19.04■□□□□ 0.64
SMARCD2-202ENST00000323347 RUFY3Q7L099 469 aa19.04■□□□□ 0.64
SMARCD2-202ENST00000323347 RRAGDQ9NQL2 400 aaPredicted RBP19.04■□□□□ 0.64
SMARCD2-202ENST00000323347 ARFGEF2Q9Y6D5 1785 aa19.04■□□□□ 0.64
SMARCD2-202ENST00000323347 JCADQ9P266 1359 aa19.03■□□□□ 0.64
SMARCD2-202ENST00000323347 ERVV-2B6SEH9 535 aa19.03■□□□□ 0.64
SMARCD2-202ENST00000323347 CAVIN1Q6NZI2 390 aaKnown RBP19.03■□□□□ 0.64
SMARCD2-202ENST00000323347 BRINP3Q76B58 766 aa19.03■□□□□ 0.64
SMARCD2-202ENST00000323347 PPP1R9BQ96SB3 815 aa19.03■□□□□ 0.64
SMARCD2-202ENST00000323347 SOS2Q07890 1332 aaPredicted RBP19.02■□□□□ 0.64
SMARCD2-202ENST00000323347 PTPN12Q05209 780 aaKnown RBP19.02■□□□□ 0.64
SMARCD2-202ENST00000323347 CCDC8Q9H0W5 538 aaPredicted RBP19.02■□□□□ 0.64
SMARCD2-202ENST00000323347 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.02■□□□□ 0.64
SMARCD2-202ENST00000323347 UBR2Q8IWV8 1755 aa19.02■□□□□ 0.63
SMARCD2-202ENST00000323347 ZSCAN31Q96LW9 406 aaPredicted RBP19.02■□□□□ 0.63
SMARCD2-202ENST00000323347 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.02■□□□□ 0.63
SMARCD2-202ENST00000323347 RFX7Q2KHR2 1363 aa19.01■□□□□ 0.63
SMARCD2-202ENST00000323347 RPAP1Q9BWH6 1393 aaPredicted RBP19.01■□□□□ 0.63
SMARCD2-202ENST00000323347 PCDH11XQ9BZA7 1347 aa19.01■□□□□ 0.63
SMARCD2-202ENST00000323347 PCDH11YQ9BZA8 1340 aa19.01■□□□□ 0.63
SMARCD2-202ENST00000323347 ATP5JP18859 108 aa19.01■□□□□ 0.63
SMARCD2-202ENST00000323347 TMEM87AQ8NBN3 555 aa19.01■□□□□ 0.63
SMARCD2-202ENST00000323347 ALDH8A1Q9H2A2 487 aaPredicted RBP19.01■□□□□ 0.63
SMARCD2-202ENST00000323347 TLR7Q9NYK1 1049 aaKnown RBP19.01■□□□□ 0.63
SMARCD2-202ENST00000323347 MED23Q9ULK4 1368 aa19.01■□□□□ 0.63
SMARCD2-202ENST00000323347 PAPPAQ13219 1627 aa19■□□□□ 0.63
SMARCD2-202ENST00000323347 H7C1W4 665 aa19■□□□□ 0.63
SMARCD2-202ENST00000323347 CCDC173Q0VFZ6 552 aa19■□□□□ 0.63
SMARCD2-202ENST00000323347 NMIQ13287 307 aaPredicted RBP19■□□□□ 0.63
SMARCD2-202ENST00000323347 NOL8Q76FK4 1167 aaKnown RBP19■□□□□ 0.63
SMARCD2-202ENST00000323347 ZCRB1Q8TBF4 217 aaKnown RBP19■□□□□ 0.63
SMARCD2-202ENST00000323347 SH2B1Q9NRF2 756 aaPredicted RBP19■□□□□ 0.63
SMARCD2-202ENST00000323347 AFDNP55196 1824 aaKnown RBP18.99■□□□□ 0.63
SMARCD2-202ENST00000323347 CASTP20810 708 aaKnown RBP18.99■□□□□ 0.63
SMARCD2-202ENST00000323347 NASPP49321 788 aaPredicted RBP18.99■□□□□ 0.63
SMARCD2-202ENST00000323347 TSGA10IPQ3SY00 556 aa18.99■□□□□ 0.63
SMARCD2-202ENST00000323347 TICAM2Q86XR7 235 aa18.99■□□□□ 0.63
SMARCD2-202ENST00000323347 RBM8AQ9Y5S9 174 aaKnown RBP18.99■□□□□ 0.63
SMARCD2-202ENST00000323347 CYP46A1Q9Y6A2 500 aa18.99■□□□□ 0.63
SMARCD2-202ENST00000323347 COL5A2P05997 1499 aaPredicted RBP18.99■□□□□ 0.63
SMARCD2-202ENST00000323347 KCPQ6ZWJ8 1503 aa18.98■□□□□ 0.63
SMARCD2-202ENST00000323347 CREB3L3Q68CJ9 461 aa18.98■□□□□ 0.63
SMARCD2-202ENST00000323347 PRPF40BQ6NWY9 871 aaKnown RBP18.98■□□□□ 0.63
SMARCD2-202ENST00000323347 FAM227BQ96M60 508 aa18.98■□□□□ 0.63
SMARCD2-202ENST00000323347 SIL1Q9H173 461 aa18.98■□□□□ 0.63
SMARCD2-202ENST00000323347 TMEM63CQ9P1W3 806 aa18.98■□□□□ 0.63
SMARCD2-202ENST00000323347 NBPF26B4DH59 902 aa18.98■□□□□ 0.63
SMARCD2-202ENST00000323347 ZKSCAN1P17029 563 aaPredicted RBP18.98■□□□□ 0.63
SMARCD2-202ENST00000323347 NCLP19338 710 aaKnown RBP18.98■□□□□ 0.63
SMARCD2-202ENST00000323347 CLCN1P35523 988 aa18.98■□□□□ 0.63
SMARCD2-202ENST00000323347 ADCK5Q3MIX3 580 aa18.98■□□□□ 0.63
SMARCD2-202ENST00000323347 TNNI3KQ59H18 835 aa18.98■□□□□ 0.63
SMARCD2-202ENST00000323347 NBPF14Q5TI25 921 aa18.98■□□□□ 0.63
SMARCD2-202ENST00000323347 NBPF10Q6P3W6 841 aaKnown RBP18.98■□□□□ 0.63
SMARCD2-202ENST00000323347 NBPF15Q8N660 670 aa18.98■□□□□ 0.63
SMARCD2-202ENST00000323347 KLHDC4Q8TBB5 520 aa18.98■□□□□ 0.63
SMARCD2-202ENST00000323347 PDRG1Q9NUG6 133 aa18.98■□□□□ 0.63
SMARCD2-202ENST00000323347 FPGT-TNNI3KV9GXZ4 949 aa18.98■□□□□ 0.63
SMARCD2-202ENST00000323347 TNS2Q63HR2 1409 aa18.97■□□□□ 0.63
SMARCD2-202ENST00000323347 LRSAM1Q6UWE0 723 aa18.97■□□□□ 0.63
SMARCD2-202ENST00000323347 CHAMP1Q96JM3 812 aa18.97■□□□□ 0.63
SMARCD2-202ENST00000323347 JAKMIP1Q96N16 626 aaKnown RBP18.97■□□□□ 0.63
SMARCD2-202ENST00000323347 CARD10Q9BWT7 1032 aa18.97■□□□□ 0.63
SMARCD2-202ENST00000323347 BOLA2Q9H3K6 86 aa18.97■□□□□ 0.63
SMARCD2-202ENST00000323347 A0A087WZG4 1122 aa18.96■□□□□ 0.63
SMARCD2-202ENST00000323347 ZSCAN22P10073 491 aaPredicted RBP18.96■□□□□ 0.63
SMARCD2-202ENST00000323347 PDIA4P13667 645 aaKnown RBP18.96■□□□□ 0.63
SMARCD2-202ENST00000323347 PSMA5P28066 241 aa18.96■□□□□ 0.63
SMARCD2-202ENST00000323347 UBE3BQ7Z3V4 1068 aa18.96■□□□□ 0.63
SMARCD2-202ENST00000323347 DBNLQ9UJU6 430 aaKnown RBP18.96■□□□□ 0.63
SMARCD2-202ENST00000323347 NSFL1CQ9UNZ2 370 aaKnown RBP18.96■□□□□ 0.63
SMARCD2-202ENST00000323347 NUP188Q5SRE5 1749 aa18.96■□□□□ 0.63
SMARCD2-202ENST00000323347 SLC27A2O14975 620 aa18.96■□□□□ 0.63
SMARCD2-202ENST00000323347 FOXO4P98177 505 aa18.96■□□□□ 0.63
SMARCD2-202ENST00000323347 USPL1Q5W0Q7 1092 aa18.96■□□□□ 0.63
SMARCD2-202ENST00000323347 KLHL34Q8N239 644 aa18.96■□□□□ 0.63
SMARCD2-202ENST00000323347 GPR108Q9NPR9 543 aa18.96■□□□□ 0.63
SMARCD2-202ENST00000323347 A0A0D9SFI3 127 aa18.95■□□□□ 0.62
SMARCD2-202ENST00000323347 TFCP2Q12800 502 aa18.95■□□□□ 0.62
SMARCD2-202ENST00000323347 FOXD4L5Q5VV16 416 aaPredicted RBP18.95■□□□□ 0.62
SMARCD2-202ENST00000323347 FOXD4L4Q8WXT5 416 aaPredicted RBP18.95■□□□□ 0.62
SMARCD2-202ENST00000323347 FSD1Q9BTV5 496 aa18.95■□□□□ 0.62
SMARCD2-202ENST00000323347 PRDM11Q9NQV5 511 aa18.95■□□□□ 0.62
SMARCD2-202ENST00000323347 HMG20BQ9P0W2 317 aa18.95■□□□□ 0.62
SMARCD2-202ENST00000323347 RBM27Q9P2N5 1060 aaKnown RBP18.95■□□□□ 0.62
SMARCD2-202ENST00000323347 RGS17Q9UGC6 210 aaPredicted RBP18.95■□□□□ 0.62
SMARCD2-202ENST00000323347 STX6O43752 255 aa18.94■□□□□ 0.62
SMARCD2-202ENST00000323347 SYT1P21579 422 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms