RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 DNAJC10Q8IXB1 793 aa20.75■□□□□ 0.91
SSR4-201ENST00000320857 SEPT12Q8IYM1 358 aa20.75■□□□□ 0.91
SSR4-201ENST00000320857 CNTROBQ8N137 903 aa20.75■□□□□ 0.91
SSR4-201ENST00000320857 MARCH10Q8NA82 808 aaPredicted RBP20.75■□□□□ 0.91
SSR4-201ENST00000320857 EPHA10Q5JZY3 1008 aa20.74■□□□□ 0.91
SSR4-201ENST00000320857 RBM42Q9BTD8 480 aaKnown RBP20.74■□□□□ 0.91
SSR4-201ENST00000320857 ECHDC1Q9NTX5 307 aa20.74■□□□□ 0.91
SSR4-201ENST00000320857 KAT6BQ8WYB5 2073 aa20.74■□□□□ 0.91
SSR4-201ENST00000320857 H7C1W4 665 aa20.73■□□□□ 0.91
SSR4-201ENST00000320857 CASP7P55210 303 aa20.73■□□□□ 0.91
SSR4-201ENST00000320857 CCDC191Q8NCU4 936 aa20.73■□□□□ 0.91
SSR4-201ENST00000320857 SYTL4Q96C24 671 aaPredicted RBP20.73■□□□□ 0.91
SSR4-201ENST00000320857 COPRSQ9NQ92 184 aa20.73■□□□□ 0.91
SSR4-201ENST00000320857 SASH1O94885 1247 aa20.73■□□□□ 0.91
SSR4-201ENST00000320857 AACSQ86V21 672 aa20.73■□□□□ 0.91
SSR4-201ENST00000320857 ZBTB3Q9H5J0 574 aa20.72■□□□□ 0.91
SSR4-201ENST00000320857 EPB41L2O43491 1005 aaKnown RBP20.71■□□□□ 0.91
SSR4-201ENST00000320857 MCCP23508 829 aa20.71■□□□□ 0.91
SSR4-201ENST00000320857 KIF6Q6ZMV9 814 aa20.71■□□□□ 0.91
SSR4-201ENST00000320857 JARID2Q92833 1246 aaPredicted RBP20.71■□□□□ 0.91
SSR4-201ENST00000320857 SLC4A9Q96Q91 983 aa20.71■□□□□ 0.91
SSR4-201ENST00000320857 RFX5P48382 616 aaPredicted RBP20.7■□□□□ 0.91
SSR4-201ENST00000320857 SIL1Q9H173 461 aa20.7■□□□□ 0.91
SSR4-201ENST00000320857 K7ELQ4 463 aaPredicted RBP20.7■□□□□ 0.9
SSR4-201ENST00000320857 ONECUT3O60422 494 aaPredicted RBP20.7■□□□□ 0.9
SSR4-201ENST00000320857 SPRYD3Q8NCJ5 442 aa20.7■□□□□ 0.9
SSR4-201ENST00000320857 CHMP5Q9NZZ3 219 aa20.7■□□□□ 0.9
SSR4-201ENST00000320857 CYP19A1P11511 503 aaPredicted RBP20.69■□□□□ 0.9
SSR4-201ENST00000320857 TJP1Q07157 1748 aa20.69■□□□□ 0.9
SSR4-201ENST00000320857 MAP4K4O95819 1239 aaPredicted RBP20.68■□□□□ 0.9
SSR4-201ENST00000320857 PTPN12Q05209 780 aaKnown RBP20.68■□□□□ 0.9
SSR4-201ENST00000320857 TCIRG1Q13488 830 aa20.68■□□□□ 0.9
SSR4-201ENST00000320857 FAM182BQ5T319 152 aa20.68■□□□□ 0.9
SSR4-201ENST00000320857 ISCA1Q9BUE6 129 aa20.68■□□□□ 0.9
SSR4-201ENST00000320857 THSD7AQ9UPZ6 1657 aa20.68■□□□□ 0.9
SSR4-201ENST00000320857 FOXO4P98177 505 aa20.67■□□□□ 0.9
SSR4-201ENST00000320857 LMBR1LQ6UX01 489 aa20.67■□□□□ 0.9
SSR4-201ENST00000320857 KLHDC4Q8TBB5 520 aa20.67■□□□□ 0.9
SSR4-201ENST00000320857 EAF2Q96CJ1 260 aaPredicted RBP20.67■□□□□ 0.9
SSR4-201ENST00000320857 ANO2Q9NQ90 1003 aa20.67■□□□□ 0.9
SSR4-201ENST00000320857 TRIM28Q13263 835 aaKnown RBP20.67■□□□□ 0.9
SSR4-201ENST00000320857 ACSBG1Q96GR2 724 aa20.67■□□□□ 0.9
SSR4-201ENST00000320857 ZNF330Q9Y3S2 320 aaPredicted RBP20.67■□□□□ 0.9
SSR4-201ENST00000320857 BRWD3Q6RI45 1802 aa20.66■□□□□ 0.9
SSR4-201ENST00000320857 ST18O60284 1047 aa20.66■□□□□ 0.9
SSR4-201ENST00000320857 ANAPC15P60006 121 aa20.66■□□□□ 0.9
SSR4-201ENST00000320857 EVI5LQ96CN4 794 aa20.66■□□□□ 0.9
SSR4-201ENST00000320857 CCDC8Q9H0W5 538 aaPredicted RBP20.65■□□□□ 0.9
SSR4-201ENST00000320857 CD2BP2O95400 341 aaKnown RBP20.64■□□□□ 0.9
SSR4-201ENST00000320857 HSP90AA1P07900 732 aaKnown RBP20.64■□□□□ 0.9
SSR4-201ENST00000320857 RUFY2Q8WXA3 655 aa20.64■□□□□ 0.9
SSR4-201ENST00000320857 CIZ1Q9ULV3 898 aaPredicted RBP20.64■□□□□ 0.9
SSR4-201ENST00000320857 CHMP3Q9Y3E7 222 aa20.64■□□□□ 0.9
SSR4-201ENST00000320857 MAP3K15Q6ZN16 1313 aa20.64■□□□□ 0.89
SSR4-201ENST00000320857 SGSM2O43147 1006 aa20.64■□□□□ 0.89
SSR4-201ENST00000320857 FRAT2O75474 233 aaPredicted RBP20.64■□□□□ 0.89
SSR4-201ENST00000320857 HSP90AB3PQ58FF7 597 aa20.64■□□□□ 0.89
SSR4-201ENST00000320857 KRT27Q7Z3Y8 459 aa20.64■□□□□ 0.89
SSR4-201ENST00000320857 DIAPH3Q9NSV4 1193 aa20.64■□□□□ 0.89
SSR4-201ENST00000320857 CICQ96RK0 1608 aaPredicted RBP20.63■□□□□ 0.89
SSR4-201ENST00000320857 AK9Q5TCS8 1911 aa20.63■□□□□ 0.89
SSR4-201ENST00000320857 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.63■□□□□ 0.89
SSR4-201ENST00000320857 HIP1O00291 1037 aa20.62■□□□□ 0.89
SSR4-201ENST00000320857 IL27Q8NEV9 243 aa20.62■□□□□ 0.89
SSR4-201ENST00000320857 ZBTB1Q9Y2K1 713 aa20.62■□□□□ 0.89
SSR4-201ENST00000320857 DDIT3P35638 169 aa20.61■□□□□ 0.89
SSR4-201ENST00000320857 IL6STP40189 918 aaPredicted RBP20.61■□□□□ 0.89
SSR4-201ENST00000320857 TFCP2Q12800 502 aa20.61■□□□□ 0.89
SSR4-201ENST00000320857 TNNI3KQ59H18 835 aa20.61■□□□□ 0.89
SSR4-201ENST00000320857 GIGYF2Q6Y7W6 1299 aaKnown RBP20.61■□□□□ 0.89
SSR4-201ENST00000320857 KIAA1211Q6ZU35 1233 aa20.61■□□□□ 0.89
SSR4-201ENST00000320857 SMARCC1Q92922 1105 aaPredicted RBP20.61■□□□□ 0.89
SSR4-201ENST00000320857 IL17RAQ96F46 866 aa20.61■□□□□ 0.89
SSR4-201ENST00000320857 FPGT-TNNI3KV9GXZ4 949 aa20.61■□□□□ 0.89
SSR4-201ENST00000320857 PCCAP05165 728 aaPredicted RBP20.61■□□□□ 0.89
SSR4-201ENST00000320857 ARXQ96QS3 562 aa20.61■□□□□ 0.89
SSR4-201ENST00000320857 TLR7Q9NYK1 1049 aaKnown RBP20.61■□□□□ 0.89
SSR4-201ENST00000320857 LOC102724428A0A0B4J2F2 783 aa20.6■□□□□ 0.89
SSR4-201ENST00000320857 SIK1P57059 783 aa20.6■□□□□ 0.89
SSR4-201ENST00000320857 PALLDQ8WX93 1383 aa20.6■□□□□ 0.89
SSR4-201ENST00000320857 ATP6V1AP38606 617 aa20.59■□□□□ 0.89
SSR4-201ENST00000320857 ILDR2Q71H61 639 aa20.59■□□□□ 0.89
SSR4-201ENST00000320857 ZBTB38Q8NAP3 1195 aaPredicted RBP20.59■□□□□ 0.89
SSR4-201ENST00000320857 PLA2G12BQ9BX93 195 aa20.59■□□□□ 0.89
SSR4-201ENST00000320857 IL15P40933 162 aaPredicted RBP20.58■□□□□ 0.89
SSR4-201ENST00000320857 MCM2P49736 904 aa20.58■□□□□ 0.89
SSR4-201ENST00000320857 CWC27Q6UX04 472 aaKnown RBP20.58■□□□□ 0.89
SSR4-201ENST00000320857 GPR108Q9NPR9 543 aa20.58■□□□□ 0.89
SSR4-201ENST00000320857 RAD50Q92878 1312 aa20.58■□□□□ 0.89
SSR4-201ENST00000320857 RREB1Q92766 1687 aa20.58■□□□□ 0.89
SSR4-201ENST00000320857 ERVV-1B6SEH8 477 aa20.58■□□□□ 0.88
SSR4-201ENST00000320857 KCNQ2O43526 872 aa20.58■□□□□ 0.88
SSR4-201ENST00000320857 CIAO1O76071 339 aa20.58■□□□□ 0.88
SSR4-201ENST00000320857 ATP5JP18859 108 aa20.58■□□□□ 0.88
SSR4-201ENST00000320857 HSPA4P34932 840 aa20.58■□□□□ 0.88
SSR4-201ENST00000320857 ZNF831Q5JPB2 1677 aa20.58■□□□□ 0.88
SSR4-201ENST00000320857 LSG1Q9H089 658 aaKnown RBP20.58■□□□□ 0.88
SSR4-201ENST00000320857 IL25Q9H293 177 aa20.58■□□□□ 0.88
SSR4-201ENST00000320857 BOLA2Q9H3K6 86 aa20.58■□□□□ 0.88
SSR4-201ENST00000320857 INTS5Q6P9B9 1019 aaKnown RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms