RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 ABTB2Q8N961 1025 aa15.99■□□□□ 0.15
SKA3-202ENST00000314759 MAP4K1Q92918 833 aa15.99■□□□□ 0.15
SKA3-202ENST00000314759 MRVI1Q9Y6F6 885 aa15.99■□□□□ 0.15
SKA3-202ENST00000314759 DIP2AQ14689 1571 aa15.99■□□□□ 0.15
SKA3-202ENST00000314759 MAP3K11Q16584 847 aa15.98■□□□□ 0.15
SKA3-202ENST00000314759 GPATCH3Q96I76 525 aa15.98■□□□□ 0.15
SKA3-202ENST00000314759 AACSQ86V21 672 aa15.98■□□□□ 0.15
SKA3-202ENST00000314759 ANKRD7Q92527 254 aa15.98■□□□□ 0.15
SKA3-202ENST00000314759 NUP62CLQ9H1M0 184 aa15.98■□□□□ 0.15
SKA3-202ENST00000314759 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.98■□□□□ 0.15
SKA3-202ENST00000314759 GOLGA6L6A8MZA4 724 aa15.98■□□□□ 0.15
SKA3-202ENST00000314759 TYRO3Q06418 890 aa15.98■□□□□ 0.15
SKA3-202ENST00000314759 LUZP1Q86V48 1076 aa15.98■□□□□ 0.15
SKA3-202ENST00000314759 C9orf78Q9NZ63 289 aaPredicted RBP15.98■□□□□ 0.15
SKA3-202ENST00000314759 ELP1O95163 1332 aa15.97■□□□□ 0.15
SKA3-202ENST00000314759 KCNJ4P48050 445 aa15.97■□□□□ 0.15
SKA3-202ENST00000314759 NMIQ13287 307 aaPredicted RBP15.97■□□□□ 0.15
SKA3-202ENST00000314759 SLC27A2O14975 620 aa15.97■□□□□ 0.15
SKA3-202ENST00000314759 PTGS1P23219 599 aa15.97■□□□□ 0.15
SKA3-202ENST00000314759 TCEANC2Q96MN5 208 aa15.97■□□□□ 0.15
SKA3-202ENST00000314759 MAP3K2Q9Y2U5 619 aa15.97■□□□□ 0.15
SKA3-202ENST00000314759 ERC1Q8IUD2 1116 aa15.96■□□□□ 0.15
SKA3-202ENST00000314759 EID1Q9Y6B2 187 aa15.96■□□□□ 0.15
SKA3-202ENST00000314759 MARF1Q9Y4F3 1742 aaKnown RBP15.96■□□□□ 0.15
SKA3-202ENST00000314759 NBPF6Q5VWK0 638 aa15.96■□□□□ 0.15
SKA3-202ENST00000314759 CKAP2LQ8IYA6 745 aa15.96■□□□□ 0.15
SKA3-202ENST00000314759 NBPF4Q96M43 638 aa15.96■□□□□ 0.15
SKA3-202ENST00000314759 DACT1Q9NYF0 836 aa15.96■□□□□ 0.15
SKA3-202ENST00000314759 TAF6LQ9Y6J9 622 aa15.96■□□□□ 0.15
SKA3-202ENST00000314759 KIF13AQ9H1H9 1805 aa15.95■□□□□ 0.14
SKA3-202ENST00000314759 BTBD11A6QL63 1104 aa15.95■□□□□ 0.14
SKA3-202ENST00000314759 PSMA5P28066 241 aa15.95■□□□□ 0.14
SKA3-202ENST00000314759 CWF19L2Q2TBE0 894 aaKnown RBP15.95■□□□□ 0.14
SKA3-202ENST00000314759 CHMP4AQ9BY43 222 aa15.95■□□□□ 0.14
SKA3-202ENST00000314759 TBX22Q9Y458 520 aa15.95■□□□□ 0.14
SKA3-202ENST00000314759 MED1Q15648 1581 aaPredicted RBP15.95■□□□□ 0.14
SKA3-202ENST00000314759 CTIFO43310 598 aaKnown RBP15.95■□□□□ 0.14
SKA3-202ENST00000314759 KIF20AO95235 890 aa15.95■□□□□ 0.14
SKA3-202ENST00000314759 PDIA4P13667 645 aaKnown RBP15.95■□□□□ 0.14
SKA3-202ENST00000314759 PDCP20941 246 aa15.95■□□□□ 0.14
SKA3-202ENST00000314759 EAF2Q96CJ1 260 aaPredicted RBP15.95■□□□□ 0.14
SKA3-202ENST00000314759 TFIP11Q9UBB9 837 aaKnown RBP15.95■□□□□ 0.14
SKA3-202ENST00000314759 DBF4Q9UBU7 674 aaPredicted RBP15.95■□□□□ 0.14
SKA3-202ENST00000314759 SASH1O94885 1247 aa15.95■□□□□ 0.14
SKA3-202ENST00000314759 CHAF1AQ13111 956 aaPredicted RBP15.95■□□□□ 0.14
SKA3-202ENST00000314759 PROSER3Q2NL68 480 aa15.95■□□□□ 0.14
SKA3-202ENST00000314759 TNMDQ9H2S6 317 aa15.95■□□□□ 0.14
SKA3-202ENST00000314759 A0A0D9SFI3 127 aa15.94■□□□□ 0.14
SKA3-202ENST00000314759 ALDH1L1O75891 902 aa15.94■□□□□ 0.14
SKA3-202ENST00000314759 CBX8Q9HC52 389 aa15.94■□□□□ 0.14
SKA3-202ENST00000314759 SNRKQ9NRH2 765 aa15.94■□□□□ 0.14
SKA3-202ENST00000314759 TEFQ10587 303 aa15.94■□□□□ 0.14
SKA3-202ENST00000314759 ANO6Q4KMQ2 910 aa15.94■□□□□ 0.14
SKA3-202ENST00000314759 LARP1Q6PKG0 1096 aaKnown RBP15.94■□□□□ 0.14
SKA3-202ENST00000314759 BLOC1S2Q6QNY1 142 aa15.94■□□□□ 0.14
SKA3-202ENST00000314759 CCDC8Q9H0W5 538 aaPredicted RBP15.94■□□□□ 0.14
SKA3-202ENST00000314759 HIP1O00291 1037 aa15.93■□□□□ 0.14
SKA3-202ENST00000314759 TOB2Q14106 344 aaPredicted RBP15.93■□□□□ 0.14
SKA3-202ENST00000314759 CCDC186Q7Z3E2 898 aa15.93■□□□□ 0.14
SKA3-202ENST00000314759 KAZALD1Q96I82 304 aa15.93■□□□□ 0.14
SKA3-202ENST00000314759 SCAND2PQ9GZW5 306 aaPredicted RBP15.93■□□□□ 0.14
SKA3-202ENST00000314759 TLR7Q9NYK1 1049 aaKnown RBP15.93■□□□□ 0.14
SKA3-202ENST00000314759 NPHP4O75161 1426 aaPredicted RBP15.93■□□□□ 0.14
SKA3-202ENST00000314759 KDM3BQ7LBC6 1761 aa15.93■□□□□ 0.14
SKA3-202ENST00000314759 CEBPAP49715 358 aaPredicted RBP15.93■□□□□ 0.14
SKA3-202ENST00000314759 NAA30Q147X3 362 aaPredicted RBP15.93■□□□□ 0.14
SKA3-202ENST00000314759 KSR2Q6VAB6 950 aa15.93■□□□□ 0.14
SKA3-202ENST00000314759 MPRIPQ6WCQ1 1025 aa15.93■□□□□ 0.14
SKA3-202ENST00000314759 C14orf37Q86TY3 774 aa15.93■□□□□ 0.14
SKA3-202ENST00000314759 SPATA32Q96LK8 384 aa15.93■□□□□ 0.14
SKA3-202ENST00000314759 RPS6KB1P23443 525 aa15.92■□□□□ 0.14
SKA3-202ENST00000314759 NCBP1Q09161 790 aaKnown RBP15.92■□□□□ 0.14
SKA3-202ENST00000314759 LRMPQ12912 555 aa15.92■□□□□ 0.14
SKA3-202ENST00000314759 ANKRD1Q15327 319 aa15.92■□□□□ 0.14
SKA3-202ENST00000314759 LEO1Q8WVC0 666 aaPredicted RBP15.92■□□□□ 0.14
SKA3-202ENST00000314759 IP6K1Q92551 441 aa15.92■□□□□ 0.14
SKA3-202ENST00000314759 NRBP1Q9UHY1 535 aa15.92■□□□□ 0.14
SKA3-202ENST00000314759 GOLGA6L4A6NEF3 574 aa15.92■□□□□ 0.14
SKA3-202ENST00000314759 RBM43Q6ZSC3 357 aaKnown RBP15.92■□□□□ 0.14
SKA3-202ENST00000314759 SUCLG2Q96I99 432 aa15.92■□□□□ 0.14
SKA3-202ENST00000314759 BOLA2Q9H3K6 86 aa15.92■□□□□ 0.14
SKA3-202ENST00000314759 NPHP3Q7Z494 1330 aa15.92■□□□□ 0.14
SKA3-202ENST00000314759 CHD2O14647 1828 aaKnown RBP15.92■□□□□ 0.14
SKA3-202ENST00000314759 STK3Q13188 491 aa15.91■□□□□ 0.14
SKA3-202ENST00000314759 BCL11BQ9C0K0 894 aaPredicted RBP15.91■□□□□ 0.14
SKA3-202ENST00000314759 RNF20Q5VTR2 975 aa15.91■□□□□ 0.14
SKA3-202ENST00000314759 ALDH8A1Q9H2A2 487 aaPredicted RBP15.91■□□□□ 0.14
SKA3-202ENST00000314759 CLSTN2Q9H4D0 955 aa15.91■□□□□ 0.14
SKA3-202ENST00000314759 DDX19AQ9NUU7 478 aaKnown RBP15.91■□□□□ 0.14
SKA3-202ENST00000314759 G3BP1Q13283 466 aaKnown RBP eCLIP15.91■□□□□ 0.14
SKA3-202ENST00000314759 AKAP4Q5JQC9 854 aa15.91■□□□□ 0.14
SKA3-202ENST00000314759 ZNF589Q86UQ0 364 aaPredicted RBP15.91■□□□□ 0.14
SKA3-202ENST00000314759 PLA2G4DQ86XP0 818 aa15.91■□□□□ 0.14
SKA3-202ENST00000314759 FSD1Q9BTV5 496 aa15.91■□□□□ 0.14
SKA3-202ENST00000314759 BICC1Q9H694 974 aaKnown RBP15.91■□□□□ 0.14
SKA3-202ENST00000314759 ANKARQ7Z5J8 1434 aa15.9■□□□□ 0.14
SKA3-202ENST00000314759 PRAMEF22A3QJZ6 481 aa15.9■□□□□ 0.14
SKA3-202ENST00000314759 GIGYF1O75420 1035 aaPredicted RBP15.9■□□□□ 0.14
SKA3-202ENST00000314759 NR1I2O75469 434 aa15.9■□□□□ 0.14
SKA3-202ENST00000314759 ZNF530Q6P9A1 599 aaPredicted RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms