RNA–Protein interactions for RNA: ENST00000314121.8

ZNF541-202, Transcript of zinc finger protein 541, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ZNF541, Length 4,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-202ENST00000314121 SYT1P21579 422 aa16.11■□□□□ 0.17
ZNF541-202ENST00000314121 TYRO3Q06418 890 aa16.11■□□□□ 0.17
ZNF541-202ENST00000314121 MAP3K12Q12852 859 aa16.11■□□□□ 0.17
ZNF541-202ENST00000314121 KIAA1328Q86T90 577 aa16.11■□□□□ 0.17
ZNF541-202ENST00000314121 CTDP1Q9Y5B0 961 aaPredicted RBP16.11■□□□□ 0.17
ZNF541-202ENST00000314121 MAGI3Q5TCQ9 1506 aa16.11■□□□□ 0.17
ZNF541-202ENST00000314121 GOLGA6L10A6NI86 522 aa16.11■□□□□ 0.17
ZNF541-202ENST00000314121 KSR2Q6VAB6 950 aa16.11■□□□□ 0.17
ZNF541-202ENST00000314121 ANKRD13DQ6ZTN6 518 aa16.11■□□□□ 0.17
ZNF541-202ENST00000314121 KIF21AQ7Z4S6 1674 aa16.11■□□□□ 0.17
ZNF541-202ENST00000314121 IGHMBP2P38935 993 aaKnown RBP16.11■□□□□ 0.17
ZNF541-202ENST00000314121 IARSP41252 1262 aaKnown RBP16.11■□□□□ 0.17
ZNF541-202ENST00000314121 OTUD7AQ8TE49 926 aaPredicted RBP16.11■□□□□ 0.17
ZNF541-202ENST00000314121 PHAXQ9H814 394 aaKnown RBP16.11■□□□□ 0.17
ZNF541-202ENST00000314121 GOLGA8AA7E2F4 631 aa16.1■□□□□ 0.17
ZNF541-202ENST00000314121 BMS1Q14692 1282 aaKnown RBP16.1■□□□□ 0.17
ZNF541-202ENST00000314121 JAKMIP3Q5VZ66 844 aa16.1■□□□□ 0.17
ZNF541-202ENST00000314121 TANGO6Q9C0B7 1094 aa16.1■□□□□ 0.17
ZNF541-202ENST00000314121 PTPRTO14522 1441 aa16.1■□□□□ 0.17
ZNF541-202ENST00000314121 SPDYE4A6NLX3 237 aa16.1■□□□□ 0.17
ZNF541-202ENST00000314121 IFIT3O14879 490 aaKnown RBP16.1■□□□□ 0.17
ZNF541-202ENST00000314121 CCDC102BQ68D86 513 aa16.1■□□□□ 0.17
ZNF541-202ENST00000314121 DDX46Q7L014 1031 aaKnown RBP16.1■□□□□ 0.17
ZNF541-202ENST00000314121 CCDC82Q8N4S0 544 aa16.1■□□□□ 0.17
ZNF541-202ENST00000314121 LINS1Q8NG48 757 aa16.1■□□□□ 0.17
ZNF541-202ENST00000314121 CALCOCO1Q9P1Z2 691 aa16.1■□□□□ 0.17
ZNF541-202ENST00000314121 ATP5J2-PTCD1G3V325 749 aa16.09■□□□□ 0.17
ZNF541-202ENST00000314121 CRACR2AQ9BSW2 395 aa16.09■□□□□ 0.17
ZNF541-202ENST00000314121 DNAJC25Q9H1X3 360 aa16.09■□□□□ 0.17
ZNF541-202ENST00000314121 BMP2KQ9NSY1 1161 aaPredicted RBP16.09■□□□□ 0.17
ZNF541-202ENST00000314121 IKQ13123 557 aaPredicted RBP16.09■□□□□ 0.17
ZNF541-202ENST00000314121 NCOA7Q8NI08 942 aa16.09■□□□□ 0.17
ZNF541-202ENST00000314121 KCNG4Q8TDN1 519 aa16.09■□□□□ 0.17
ZNF541-202ENST00000314121 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.09■□□□□ 0.17
ZNF541-202ENST00000314121 KIAA0754O94854 1291 aa16.09■□□□□ 0.17
ZNF541-202ENST00000314121 RDXP35241 583 aaKnown RBP16.09■□□□□ 0.17
ZNF541-202ENST00000314121 SSRP1Q08945 709 aaKnown RBP16.09■□□□□ 0.17
ZNF541-202ENST00000314121 MRPS27Q92552 414 aaKnown RBP16.09■□□□□ 0.17
ZNF541-202ENST00000314121 FLT4P35916 1363 aa16.08■□□□□ 0.17
ZNF541-202ENST00000314121 RNF41Q9H4P4 317 aaPredicted RBP16.08■□□□□ 0.17
ZNF541-202ENST00000314121 MINDY4BA8MYZ0 360 aa16.08■□□□□ 0.16
ZNF541-202ENST00000314121 HAND2P61296 217 aa16.08■□□□□ 0.16
ZNF541-202ENST00000314121 IFNL2Q8IZJ0 200 aa16.08■□□□□ 0.16
ZNF541-202ENST00000314121 SNRKQ9NRH2 765 aa16.08■□□□□ 0.16
ZNF541-202ENST00000314121 ZNF521Q96K83 1311 aa16.08■□□□□ 0.16
ZNF541-202ENST00000314121 ERLIN2O94905 339 aa16.08■□□□□ 0.16
ZNF541-202ENST00000314121 MCMDC2Q4G0Z9 681 aa16.08■□□□□ 0.16
ZNF541-202ENST00000314121 PPFIA3O75145 1194 aa16.07■□□□□ 0.16
ZNF541-202ENST00000314121 SNRPA1P09661 255 aaKnown RBP16.07■□□□□ 0.16
ZNF541-202ENST00000314121 CWC25Q9NXE8 425 aaPredicted RBP16.07■□□□□ 0.16
ZNF541-202ENST00000314121 MAP9Q49MG5 647 aa16.07■□□□□ 0.16
ZNF541-202ENST00000314121 ZNF397Q8NF99 534 aaPredicted RBP16.07■□□□□ 0.16
ZNF541-202ENST00000314121 LRRC2Q9BYS8 371 aa16.07■□□□□ 0.16
ZNF541-202ENST00000314121 MSH6P52701 1360 aa16.07■□□□□ 0.16
ZNF541-202ENST00000314121 ABCC10Q5T3U5 1492 aa16.07■□□□□ 0.16
ZNF541-202ENST00000314121 CHL1O00533 1208 aa16.07■□□□□ 0.16
ZNF541-202ENST00000314121 IL13P35225 146 aa16.07■□□□□ 0.16
ZNF541-202ENST00000314121 IQCA1Q86XH1 822 aa16.07■□□□□ 0.16
ZNF541-202ENST00000314121 SYKP43405 635 aa16.07■□□□□ 0.16
ZNF541-202ENST00000314121 NMIQ13287 307 aaPredicted RBP16.07■□□□□ 0.16
ZNF541-202ENST00000314121 CREB3L3Q68CJ9 461 aa16.07■□□□□ 0.16
ZNF541-202ENST00000314121 CTCFLQ8NI51 663 aaPredicted RBP16.07■□□□□ 0.16
ZNF541-202ENST00000314121 HSP90AB3PQ58FF7 597 aa16.06■□□□□ 0.16
ZNF541-202ENST00000314121 ODF2Q5BJF6 829 aa16.06■□□□□ 0.16
ZNF541-202ENST00000314121 Q6ZUG5 572 aa16.06■□□□□ 0.16
ZNF541-202ENST00000314121 KRT222Q8N1A0 295 aa16.06■□□□□ 0.16
ZNF541-202ENST00000314121 ZBTB3Q9H5J0 574 aa16.06■□□□□ 0.16
ZNF541-202ENST00000314121 LMBRD1Q9NUN5 540 aa16.06■□□□□ 0.16
ZNF541-202ENST00000314121 ABCC1P33527 1531 aa16.06■□□□□ 0.16
ZNF541-202ENST00000314121 ZFYP08048 801 aaPredicted RBP16.06■□□□□ 0.16
ZNF541-202ENST00000314121 METAP2P50579 478 aaKnown RBP eCLIP16.06■□□□□ 0.16
ZNF541-202ENST00000314121 PA2G4Q9UQ80 394 aaKnown RBP16.06■□□□□ 0.16
ZNF541-202ENST00000314121 ASXL2Q76L83 1435 aa16.06■□□□□ 0.16
ZNF541-202ENST00000314121 KLF18A0A0U1RQI7 1052 aa16.06■□□□□ 0.16
ZNF541-202ENST00000314121 POLR3GO15318 223 aaPredicted RBP16.06■□□□□ 0.16
ZNF541-202ENST00000314121 FAM193AP78312 1265 aa16.06■□□□□ 0.16
ZNF541-202ENST00000314121 KANK3Q6NY19 840 aa16.06■□□□□ 0.16
ZNF541-202ENST00000314121 MICU3Q86XE3 530 aa16.06■□□□□ 0.16
ZNF541-202ENST00000314121 CPLX3Q8WVH0 158 aa16.06■□□□□ 0.16
ZNF541-202ENST00000314121 TTF1Q15361 905 aaPredicted RBP16.06■□□□□ 0.16
ZNF541-202ENST00000314121 LDHAL6AQ6ZMR3 332 aa16.06■□□□□ 0.16
ZNF541-202ENST00000314121 G2E3Q7L622 706 aa16.06■□□□□ 0.16
ZNF541-202ENST00000314121 PIBF1Q8WXW3 757 aa16.06■□□□□ 0.16
ZNF541-202ENST00000314121 ZHX3Q9H4I2 956 aa16.06■□□□□ 0.16
ZNF541-202ENST00000314121 GNG11P61952 73 aa16.05■□□□□ 0.16
ZNF541-202ENST00000314121 RUFY3Q7L099 469 aa16.05■□□□□ 0.16
ZNF541-202ENST00000314121 COPS6Q7L5N1 327 aa16.05■□□□□ 0.16
ZNF541-202ENST00000314121 MAST1Q9Y2H9 1570 aa16.05■□□□□ 0.16
ZNF541-202ENST00000314121 MCM3P25205 808 aa16.05■□□□□ 0.16
ZNF541-202ENST00000314121 UBASH3AP57075 661 aa16.05■□□□□ 0.16
ZNF541-202ENST00000314121 SPA17Q15506 151 aa16.05■□□□□ 0.16
ZNF541-202ENST00000314121 AKAP4Q5JQC9 854 aa16.05■□□□□ 0.16
ZNF541-202ENST00000314121 ISM2Q6H9L7 571 aa16.05■□□□□ 0.16
ZNF541-202ENST00000314121 EYA1Q99502 592 aa16.05■□□□□ 0.16
ZNF541-202ENST00000314121 TMOD3Q9NYL9 352 aa16.05■□□□□ 0.16
ZNF541-202ENST00000314121 RAD50Q92878 1312 aa16.05■□□□□ 0.16
ZNF541-202ENST00000314121 ANKRD18BA2A2Z9 1011 aa16.05■□□□□ 0.16
ZNF541-202ENST00000314121 TUBB4AP04350 444 aa16.05■□□□□ 0.16
ZNF541-202ENST00000314121 TMEM67Q5HYA8 995 aa16.05■□□□□ 0.16
ZNF541-202ENST00000314121 SAMD1Q6SPF0 538 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms