RNA–Protein interactions for RNA: ENST00000309534.10

CGGBP1-201, Transcript of CGG triplet repeat binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CGGBP1, Length 4,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGGBP1-201ENST00000309534 FBXO3Q9UK99 471 aa18.83■□□□□ 0.6
CGGBP1-201ENST00000309534 MAP4K4O95819 1239 aaPredicted RBP18.83■□□□□ 0.6
CGGBP1-201ENST00000309534 GIGYF2Q6Y7W6 1299 aaKnown RBP18.83■□□□□ 0.6
CGGBP1-201ENST00000309534 TRPC5Q9UL62 973 aaPredicted RBP18.83■□□□□ 0.6
CGGBP1-201ENST00000309534 NHSL1Q5SYE7 1610 aa18.83■□□□□ 0.6
CGGBP1-201ENST00000309534 ERVV-1B6SEH8 477 aa18.82■□□□□ 0.6
CGGBP1-201ENST00000309534 LOC102724428A0A0B4J2F2 783 aa18.82■□□□□ 0.6
CGGBP1-201ENST00000309534 FAM177BA6PVY3 158 aa18.82■□□□□ 0.6
CGGBP1-201ENST00000309534 K7ELQ4 463 aaPredicted RBP18.82■□□□□ 0.6
CGGBP1-201ENST00000309534 SIK1P57059 783 aa18.82■□□□□ 0.6
CGGBP1-201ENST00000309534 UTP14AQ9BVJ6 771 aaKnown RBP18.82■□□□□ 0.6
CGGBP1-201ENST00000309534 UTYO14607 1347 aa18.82■□□□□ 0.6
CGGBP1-201ENST00000309534 TNS2Q63HR2 1409 aa18.82■□□□□ 0.6
CGGBP1-201ENST00000309534 GSPT1P15170 499 aaKnown RBP18.81■□□□□ 0.6
CGGBP1-201ENST00000309534 ZSCAN25Q6NSZ9 544 aa18.81■□□□□ 0.6
CGGBP1-201ENST00000309534 BOLA2Q9H3K6 86 aa18.81■□□□□ 0.6
CGGBP1-201ENST00000309534 TBC1D2BQ9UPU7 963 aa18.81■□□□□ 0.6
CGGBP1-201ENST00000309534 NCLP19338 710 aaKnown RBP18.81■□□□□ 0.6
CGGBP1-201ENST00000309534 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.81■□□□□ 0.6
CGGBP1-201ENST00000309534 RGPD5Q99666 1765 aa18.81■□□□□ 0.6
CGGBP1-201ENST00000309534 CWC27Q6UX04 472 aaKnown RBP18.8■□□□□ 0.6
CGGBP1-201ENST00000309534 SNX21Q969T3 373 aa18.8■□□□□ 0.6
CGGBP1-201ENST00000309534 MRC1P22897 1456 aa18.8■□□□□ 0.6
CGGBP1-201ENST00000309534 EYA2O00167 538 aa18.8■□□□□ 0.6
CGGBP1-201ENST00000309534 ANAPC15P60006 121 aa18.8■□□□□ 0.6
CGGBP1-201ENST00000309534 TSHZ3Q63HK5 1081 aa18.8■□□□□ 0.6
CGGBP1-201ENST00000309534 ZBTB38Q8NAP3 1195 aaPredicted RBP18.8■□□□□ 0.6
CGGBP1-201ENST00000309534 IRS4O14654 1257 aaPredicted RBP18.8■□□□□ 0.6
CGGBP1-201ENST00000309534 H7C1W4 665 aa18.8■□□□□ 0.6
CGGBP1-201ENST00000309534 CCDC152Q4G0S7 254 aa18.8■□□□□ 0.6
CGGBP1-201ENST00000309534 LDHAL6AQ6ZMR3 332 aa18.8■□□□□ 0.6
CGGBP1-201ENST00000309534 TMX4Q9H1E5 349 aaPredicted RBP18.8■□□□□ 0.6
CGGBP1-201ENST00000309534 CIZ1Q9ULV3 898 aaPredicted RBP18.8■□□□□ 0.6
CGGBP1-201ENST00000309534 PHLPP1O60346 1717 aa18.79■□□□□ 0.6
CGGBP1-201ENST00000309534 CHMLP26374 656 aa18.79■□□□□ 0.6
CGGBP1-201ENST00000309534 KDM3BQ7LBC6 1761 aa18.79■□□□□ 0.6
CGGBP1-201ENST00000309534 NBPF26B4DH59 902 aa18.79■□□□□ 0.6
CGGBP1-201ENST00000309534 NBPF14Q5TI25 921 aa18.79■□□□□ 0.6
CGGBP1-201ENST00000309534 NBPF10Q6P3W6 841 aaKnown RBP18.79■□□□□ 0.6
CGGBP1-201ENST00000309534 NBPF15Q8N660 670 aa18.79■□□□□ 0.6
CGGBP1-201ENST00000309534 PDE8AO60658 829 aa18.78■□□□□ 0.6
CGGBP1-201ENST00000309534 IFIT1P09914 478 aaKnown RBP18.78■□□□□ 0.6
CGGBP1-201ENST00000309534 NEK4P51957 841 aa18.78■□□□□ 0.6
CGGBP1-201ENST00000309534 TBC1D2Q9BYX2 928 aa18.78■□□□□ 0.6
CGGBP1-201ENST00000309534 NUCB2P80303 420 aa18.78■□□□□ 0.6
CGGBP1-201ENST00000309534 TRIM28Q13263 835 aaKnown RBP18.78■□□□□ 0.6
CGGBP1-201ENST00000309534 CDC5LQ99459 802 aaKnown RBP18.78■□□□□ 0.6
CGGBP1-201ENST00000309534 SH3TC1Q8TE82 1336 aa18.78■□□□□ 0.6
CGGBP1-201ENST00000309534 RAD50Q92878 1312 aa18.78■□□□□ 0.6
CGGBP1-201ENST00000309534 AK7Q96M32 723 aa18.78■□□□□ 0.6
CGGBP1-201ENST00000309534 NYXQ9GZU5 481 aa18.78■□□□□ 0.6
CGGBP1-201ENST00000309534 GNL3LQ9NVN8 582 aaKnown RBP18.78■□□□□ 0.6
CGGBP1-201ENST00000309534 TFCP2Q12800 502 aa18.77■□□□□ 0.6
CGGBP1-201ENST00000309534 TNNI3KQ59H18 835 aa18.77■□□□□ 0.6
CGGBP1-201ENST00000309534 NIP7Q9Y221 180 aaKnown RBP eCLIP18.77■□□□□ 0.6
CGGBP1-201ENST00000309534 FPGT-TNNI3KV9GXZ4 949 aa18.77■□□□□ 0.6
CGGBP1-201ENST00000309534 PALLDQ8WX93 1383 aa18.77■□□□□ 0.6
CGGBP1-201ENST00000309534 ZBTB1Q9Y2K1 713 aa18.77■□□□□ 0.6
CGGBP1-201ENST00000309534 CYP19A1P11511 503 aaPredicted RBP18.77■□□□□ 0.59
CGGBP1-201ENST00000309534 CCDC85AQ96PX6 553 aaPredicted RBP18.77■□□□□ 0.59
CGGBP1-201ENST00000309534 CWC22Q9HCG8 908 aaKnown RBP18.77■□□□□ 0.59
CGGBP1-201ENST00000309534 COL18A1P39060 1754 aa18.76■□□□□ 0.59
CGGBP1-201ENST00000309534 DDX11L8A8MPP1 907 aa18.76■□□□□ 0.59
CGGBP1-201ENST00000309534 USP26Q9BXU7 913 aa18.76■□□□□ 0.59
CGGBP1-201ENST00000309534 RTCBQ9Y3I0 505 aaKnown RBP18.76■□□□□ 0.59
CGGBP1-201ENST00000309534 VPS37DQ86XT2 251 aa18.76■□□□□ 0.59
CGGBP1-201ENST00000309534 GPR108Q9NPR9 543 aa18.76■□□□□ 0.59
CGGBP1-201ENST00000309534 FRAT2O75474 233 aaPredicted RBP18.76■□□□□ 0.59
CGGBP1-201ENST00000309534 SLC5A1P13866 664 aa18.76■□□□□ 0.59
CGGBP1-201ENST00000309534 CRKLP46109 303 aaKnown RBP18.76■□□□□ 0.59
CGGBP1-201ENST00000309534 FAM89AQ96GI7 184 aa18.76■□□□□ 0.59
CGGBP1-201ENST00000309534 KRT32Q14532 448 aa18.75■□□□□ 0.59
CGGBP1-201ENST00000309534 CIAO1O76071 339 aa18.75■□□□□ 0.59
CGGBP1-201ENST00000309534 ISCA1Q9BUE6 129 aa18.75■□□□□ 0.59
CGGBP1-201ENST00000309534 CCNL1Q9UK58 526 aaPredicted RBP18.75■□□□□ 0.59
CGGBP1-201ENST00000309534 WASHC4Q2M389 1173 aa18.74■□□□□ 0.59
CGGBP1-201ENST00000309534 XIRP1Q702N8 1843 aaKnown RBP18.74■□□□□ 0.59
CGGBP1-201ENST00000309534 BCL9O00512 1426 aa18.74■□□□□ 0.59
CGGBP1-201ENST00000309534 SCN11AQ9UI33 1791 aa18.74■□□□□ 0.59
CGGBP1-201ENST00000309534 UQCRFS1P1P0C7P4 283 aa18.73■□□□□ 0.59
CGGBP1-201ENST00000309534 RABL6Q3YEC7 729 aaPredicted RBP18.73■□□□□ 0.59
CGGBP1-201ENST00000309534 KIF3AQ9Y496 699 aa18.73■□□□□ 0.59
CGGBP1-201ENST00000309534 TTF1Q15361 905 aaPredicted RBP18.73■□□□□ 0.59
CGGBP1-201ENST00000309534 ATP2B3Q16720 1220 aa18.73■□□□□ 0.59
CGGBP1-201ENST00000309534 CYP46A1Q9Y6A2 500 aa18.73■□□□□ 0.59
CGGBP1-201ENST00000309534 RFC4P35249 363 aa18.72■□□□□ 0.59
CGGBP1-201ENST00000309534 MARCH10Q8NA82 808 aaPredicted RBP18.72■□□□□ 0.59
CGGBP1-201ENST00000309534 SETDB2Q96T68 719 aa18.72■□□□□ 0.59
CGGBP1-201ENST00000309534 FOXD4L1Q9NU39 408 aa18.72■□□□□ 0.59
CGGBP1-201ENST00000309534 PKD1L3Q7Z443 1732 aa18.72■□□□□ 0.59
CGGBP1-201ENST00000309534 CDHR2Q9BYE9 1310 aa18.72■□□□□ 0.59
CGGBP1-201ENST00000309534 ANKRD1Q15327 319 aa18.72■□□□□ 0.59
CGGBP1-201ENST00000309534 ATP5JP18859 108 aa18.72■□□□□ 0.59
CGGBP1-201ENST00000309534 FKBP4Q02790 459 aaKnown RBP eCLIP18.72■□□□□ 0.59
CGGBP1-201ENST00000309534 BICDL1Q6ZP65 573 aa18.72■□□□□ 0.59
CGGBP1-201ENST00000309534 ZFYP08048 801 aaPredicted RBP18.71■□□□□ 0.59
CGGBP1-201ENST00000309534 CTSWP56202 376 aa18.71■□□□□ 0.59
CGGBP1-201ENST00000309534 NOL8Q76FK4 1167 aaKnown RBP18.71■□□□□ 0.59
CGGBP1-201ENST00000309534 NLRP10Q86W26 655 aa18.71■□□□□ 0.59
CGGBP1-201ENST00000309534 KLHDC4Q8TBB5 520 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms