RNA–Protein interactions for RNA: ENST00000308961.4

NDUFA11-201, Transcript of NADH:ubiquinone oxidoreductase subunit A11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFA11, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA11-201ENST00000308961 NBPF7P0C2Y1 421 aaPredicted RBP21.57■■□□□ 1.04
NDUFA11-201ENST00000308961 MSL1Q68DK7 614 aa21.57■■□□□ 1.04
NDUFA11-201ENST00000308961 SYNE4Q8N205 404 aa21.57■■□□□ 1.04
NDUFA11-201ENST00000308961 DDX19BQ9UMR2 479 aa21.57■■□□□ 1.04
NDUFA11-201ENST00000308961 PSDA5PKW4 1024 aaPredicted RBP21.56■■□□□ 1.04
NDUFA11-201ENST00000308961 FAM177BA6PVY3 158 aa21.56■■□□□ 1.04
NDUFA11-201ENST00000308961 H7C1W4 665 aa21.56■■□□□ 1.04
NDUFA11-201ENST00000308961 AFDNP55196 1824 aaKnown RBP21.55■■□□□ 1.04
NDUFA11-201ENST00000308961 GRM8O00222 908 aa21.55■■□□□ 1.04
NDUFA11-201ENST00000308961 NEFLP07196 543 aa21.55■■□□□ 1.04
NDUFA11-201ENST00000308961 CASP7P55210 303 aa21.55■■□□□ 1.04
NDUFA11-201ENST00000308961 NLGN1Q8N2Q7 840 aa21.55■■□□□ 1.04
NDUFA11-201ENST00000308961 SETDB2Q96T68 719 aa21.55■■□□□ 1.04
NDUFA11-201ENST00000308961 ZBTB40Q9NUA8 1239 aa21.55■■□□□ 1.04
NDUFA11-201ENST00000308961 UTYO14607 1347 aa21.55■■□□□ 1.04
NDUFA11-201ENST00000308961 IBTKQ9P2D0 1353 aaPredicted RBP21.54■■□□□ 1.04
NDUFA11-201ENST00000308961 DDR1Q08345 913 aa21.54■■□□□ 1.04
NDUFA11-201ENST00000308961 PARP10Q53GL7 1025 aa21.54■■□□□ 1.04
NDUFA11-201ENST00000308961 RTL5Q5HYW3 569 aaPredicted RBP21.54■■□□□ 1.04
NDUFA11-201ENST00000308961 C9orf78Q9NZ63 289 aaPredicted RBP21.54■■□□□ 1.04
NDUFA11-201ENST00000308961 NTSR2O95665 410 aa21.53■■□□□ 1.04
NDUFA11-201ENST00000308961 UBE3BQ7Z3V4 1068 aa21.53■■□□□ 1.04
NDUFA11-201ENST00000308961 FAM89AQ96GI7 184 aa21.53■■□□□ 1.04
NDUFA11-201ENST00000308961 PCCAP05165 728 aaPredicted RBP21.52■■□□□ 1.04
NDUFA11-201ENST00000308961 KAZALD1Q96I82 304 aa21.52■■□□□ 1.04
NDUFA11-201ENST00000308961 UTP14AQ9BVJ6 771 aaKnown RBP21.52■■□□□ 1.04
NDUFA11-201ENST00000308961 C1orf115Q9H7X2 142 aa21.52■■□□□ 1.04
NDUFA11-201ENST00000308961 TRMT112Q9UI30 125 aaKnown RBP21.52■■□□□ 1.04
NDUFA11-201ENST00000308961 SOCS7O14512 581 aa21.51■■□□□ 1.03
NDUFA11-201ENST00000308961 PPP1R42Q7Z4L9 355 aa21.51■■□□□ 1.03
NDUFA11-201ENST00000308961 NUTM1Q86Y26 1132 aa21.51■■□□□ 1.03
NDUFA11-201ENST00000308961 ZBTB38Q8NAP3 1195 aaPredicted RBP21.51■■□□□ 1.03
NDUFA11-201ENST00000308961 SUCLG2Q96I99 432 aa21.51■■□□□ 1.03
NDUFA11-201ENST00000308961 POLRMTO00411 1230 aaKnown RBP21.5■■□□□ 1.03
NDUFA11-201ENST00000308961 GNAI3P08754 354 aa21.5■■□□□ 1.03
NDUFA11-201ENST00000308961 MMP10P09238 476 aa21.5■■□□□ 1.03
NDUFA11-201ENST00000308961 UBTFL1P0CB47 393 aaPredicted RBP21.5■■□□□ 1.03
NDUFA11-201ENST00000308961 EPHA10Q5JZY3 1008 aa21.5■■□□□ 1.03
NDUFA11-201ENST00000308961 CCDC24Q8N4L8 307 aa21.5■■□□□ 1.03
NDUFA11-201ENST00000308961 SLC16A10Q8TF71 515 aa21.5■■□□□ 1.03
NDUFA11-201ENST00000308961 CASZ1Q86V15 1759 aa21.5■■□□□ 1.03
NDUFA11-201ENST00000308961 COL24A1Q17RW2 1714 aa21.49■■□□□ 1.03
NDUFA11-201ENST00000308961 ZBTB7AO95365 584 aa21.49■■□□□ 1.03
NDUFA11-201ENST00000308961 SERPINB2P05120 415 aa21.49■■□□□ 1.03
NDUFA11-201ENST00000308961 ERFEQ4G0M1 354 aa21.49■■□□□ 1.03
NDUFA11-201ENST00000308961 LRRFIP2Q9Y608 721 aaKnown RBP21.49■■□□□ 1.03
NDUFA11-201ENST00000308961 NBPF5PQ86XG9 351 aaPredicted RBP21.48■■□□□ 1.03
NDUFA11-201ENST00000308961 PCDHB15Q9Y5E8 787 aa21.48■■□□□ 1.03
NDUFA11-201ENST00000308961 CARMIL3Q8ND23 1372 aa21.48■■□□□ 1.03
NDUFA11-201ENST00000308961 GNAI2P04899 355 aa21.47■■□□□ 1.03
NDUFA11-201ENST00000308961 ATF5Q9Y2D1 282 aaPredicted RBP21.47■■□□□ 1.03
NDUFA11-201ENST00000308961 SH3TC1Q8TE82 1336 aa21.47■■□□□ 1.03
NDUFA11-201ENST00000308961 CDHR2Q9BYE9 1310 aa21.47■■□□□ 1.03
NDUFA11-201ENST00000308961 IRS4O14654 1257 aaPredicted RBP21.46■■□□□ 1.03
NDUFA11-201ENST00000308961 HCLS1P14317 486 aaPredicted RBP21.46■■□□□ 1.03
NDUFA11-201ENST00000308961 FOXO4P98177 505 aa21.46■■□□□ 1.03
NDUFA11-201ENST00000308961 PRR5LQ6MZQ0 368 aa21.46■■□□□ 1.03
NDUFA11-201ENST00000308961 TPTE2Q6XPS3 522 aa21.46■■□□□ 1.03
NDUFA11-201ENST00000308961 CHMP4BQ9H444 224 aaKnown RBP21.46■■□□□ 1.03
NDUFA11-201ENST00000308961 SLC10A5Q5PT55 438 aa21.45■■□□□ 1.02
NDUFA11-201ENST00000308961 ANKRD44Q8N8A2 993 aa21.45■■□□□ 1.02
NDUFA11-201ENST00000308961 NYXQ9GZU5 481 aa21.45■■□□□ 1.02
NDUFA11-201ENST00000308961 ABCC12Q96J65 1359 aa21.45■■□□□ 1.02
NDUFA11-201ENST00000308961 C3orf67Q6ZVT6 689 aa21.44■■□□□ 1.02
NDUFA11-201ENST00000308961 BICC1Q9H694 974 aaKnown RBP21.44■■□□□ 1.02
NDUFA11-201ENST00000308961 PARP3Q9Y6F1 533 aa21.44■■□□□ 1.02
NDUFA11-201ENST00000308961 GTF2E1P29083 439 aaPredicted RBP21.43■■□□□ 1.02
NDUFA11-201ENST00000308961 SIRT2Q8IXJ6 389 aa21.43■■□□□ 1.02
NDUFA11-201ENST00000308961 CNBD1Q8NA66 436 aa21.43■■□□□ 1.02
NDUFA11-201ENST00000308961 PLA2G12BQ9BX93 195 aa21.43■■□□□ 1.02
NDUFA11-201ENST00000308961 MTFR1LQ9H019 292 aa21.43■■□□□ 1.02
NDUFA11-201ENST00000308961 AAMPQ13685 434 aa21.42■■□□□ 1.02
NDUFA11-201ENST00000308961 CEP85Q6P2H3 762 aa21.42■■□□□ 1.02
NDUFA11-201ENST00000308961 GTF3C3Q9Y5Q9 886 aa21.42■■□□□ 1.02
NDUFA11-201ENST00000308961 PDE8AO60658 829 aa21.41■■□□□ 1.02
NDUFA11-201ENST00000308961 ATP8B2P98198 1209 aa21.41■■□□□ 1.02
NDUFA11-201ENST00000308961 RABL6Q3YEC7 729 aaPredicted RBP21.41■■□□□ 1.02
NDUFA11-201ENST00000308961 ERICH6BQ5W0A0 696 aa21.41■■□□□ 1.02
NDUFA11-201ENST00000308961 NRXN2Q9P2S2 1712 aa21.41■■□□□ 1.02
NDUFA11-201ENST00000308961 PNMA6EA0A0J9YXQ4 647 aa21.4■■□□□ 1.02
NDUFA11-201ENST00000308961 CSF1RP07333 972 aa21.4■■□□□ 1.02
NDUFA11-201ENST00000308961 LMBR1LQ6UX01 489 aa21.4■■□□□ 1.02
NDUFA11-201ENST00000308961 HDAC5Q9UQL6 1122 aa21.4■■□□□ 1.02
NDUFA11-201ENST00000308961 DDX60Q8IY21 1712 aaKnown RBP21.4■■□□□ 1.02
NDUFA11-201ENST00000308961 TTLL11Q8NHH1 800 aa21.39■■□□□ 1.01
NDUFA11-201ENST00000308961 CCDC85AQ96PX6 553 aaPredicted RBP21.39■■□□□ 1.01
NDUFA11-201ENST00000308961 SGIP1Q9BQI5 828 aa21.39■■□□□ 1.01
NDUFA11-201ENST00000308961 NPHP1O15259 732 aa21.38■■□□□ 1.01
NDUFA11-201ENST00000308961 CTSWP56202 376 aa21.38■■□□□ 1.01
NDUFA11-201ENST00000308961 RPAP2Q8IXW5 612 aaPredicted RBP21.38■■□□□ 1.01
NDUFA11-201ENST00000308961 IGHDP01880 384 aa21.37■■□□□ 1.01
NDUFA11-201ENST00000308961 PTGER2P43116 358 aa21.37■■□□□ 1.01
NDUFA11-201ENST00000308961 ST5P78524 1137 aa21.37■■□□□ 1.01
NDUFA11-201ENST00000308961 MTX1Q13505 466 aa21.37■■□□□ 1.01
NDUFA11-201ENST00000308961 SF3B3Q15393 1217 aaKnown RBP21.36■■□□□ 1.01
NDUFA11-201ENST00000308961 TNRC6CQ9HCJ0 1690 aaKnown RBP21.36■■□□□ 1.01
NDUFA11-201ENST00000308961 RFX5P48382 616 aaPredicted RBP21.35■■□□□ 1.01
NDUFA11-201ENST00000308961 POLA2Q14181 598 aa21.35■■□□□ 1.01
NDUFA11-201ENST00000308961 SSH3Q8TE77 659 aa21.35■■□□□ 1.01
NDUFA11-201ENST00000308961 NLRP3Q96P20 1036 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms