RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 GPTP24298 496 aa17.72■□□□□ 0.43
SHCBP1-201ENST00000303383 CNTROBQ8N137 903 aa17.72■□□□□ 0.43
SHCBP1-201ENST00000303383 GLRX3O76003 335 aaKnown RBP17.72■□□□□ 0.43
SHCBP1-201ENST00000303383 IL6STP40189 918 aaPredicted RBP17.72■□□□□ 0.43
SHCBP1-201ENST00000303383 RBM25P49756 843 aaKnown RBP17.72■□□□□ 0.43
SHCBP1-201ENST00000303383 GIGYF2Q6Y7W6 1299 aaKnown RBP17.72■□□□□ 0.43
SHCBP1-201ENST00000303383 TBC1D2BQ9UPU7 963 aa17.72■□□□□ 0.43
SHCBP1-201ENST00000303383 HSCBQ8IWL3 235 aa17.71■□□□□ 0.43
SHCBP1-201ENST00000303383 TTC41PQ6P2S7 1318 aa17.71■□□□□ 0.43
SHCBP1-201ENST00000303383 KCNQ2O43526 872 aa17.71■□□□□ 0.43
SHCBP1-201ENST00000303383 ISCA1Q9BUE6 129 aa17.71■□□□□ 0.43
SHCBP1-201ENST00000303383 ECHDC1Q9NTX5 307 aa17.71■□□□□ 0.43
SHCBP1-201ENST00000303383 CCDC87Q9NVE4 849 aa17.71■□□□□ 0.43
SHCBP1-201ENST00000303383 PALLDQ8WX93 1383 aa17.71■□□□□ 0.43
SHCBP1-201ENST00000303383 RABL6Q3YEC7 729 aaPredicted RBP17.71■□□□□ 0.43
SHCBP1-201ENST00000303383 COPRSQ9NQ92 184 aa17.71■□□□□ 0.43
SHCBP1-201ENST00000303383 CCDC8Q9H0W5 538 aaPredicted RBP17.7■□□□□ 0.42
SHCBP1-201ENST00000303383 SASH1O94885 1247 aa17.7■□□□□ 0.42
SHCBP1-201ENST00000303383 CASP7P55210 303 aa17.7■□□□□ 0.42
SHCBP1-201ENST00000303383 TAF7LQ5H9L4 462 aa17.7■□□□□ 0.42
SHCBP1-201ENST00000303383 CRKLP46109 303 aaKnown RBP17.69■□□□□ 0.42
SHCBP1-201ENST00000303383 FAM89AQ96GI7 184 aa17.69■□□□□ 0.42
SHCBP1-201ENST00000303383 COL15A1P39059 1388 aa17.69■□□□□ 0.42
SHCBP1-201ENST00000303383 PTPN12Q05209 780 aaKnown RBP17.68■□□□□ 0.42
SHCBP1-201ENST00000303383 CCDC57Q2TAC2 916 aa17.68■□□□□ 0.42
SHCBP1-201ENST00000303383 TRIM28Q13263 835 aaKnown RBP17.68■□□□□ 0.42
SHCBP1-201ENST00000303383 HLFQ16534 295 aa17.68■□□□□ 0.42
SHCBP1-201ENST00000303383 AFF2P51816 1311 aa17.68■□□□□ 0.42
SHCBP1-201ENST00000303383 PI4K2BQ8TCG2 481 aa17.68■□□□□ 0.42
SHCBP1-201ENST00000303383 FOXO4P98177 505 aa17.67■□□□□ 0.42
SHCBP1-201ENST00000303383 TRMT112Q9UI30 125 aaKnown RBP17.67■□□□□ 0.42
SHCBP1-201ENST00000303383 PCCAP05165 728 aaPredicted RBP17.67■□□□□ 0.42
SHCBP1-201ENST00000303383 NBR1Q14596 966 aa17.67■□□□□ 0.42
SHCBP1-201ENST00000303383 EAF2Q96CJ1 260 aaPredicted RBP17.67■□□□□ 0.42
SHCBP1-201ENST00000303383 TBC1D2Q9BYX2 928 aa17.67■□□□□ 0.42
SHCBP1-201ENST00000303383 MCCP23508 829 aa17.67■□□□□ 0.42
SHCBP1-201ENST00000303383 ZBTB38Q8NAP3 1195 aaPredicted RBP17.67■□□□□ 0.42
SHCBP1-201ENST00000303383 ANO2Q9NQ90 1003 aa17.67■□□□□ 0.42
SHCBP1-201ENST00000303383 NUP188Q5SRE5 1749 aa17.67■□□□□ 0.42
SHCBP1-201ENST00000303383 CHMLP26374 656 aa17.66■□□□□ 0.42
SHCBP1-201ENST00000303383 TFCP2Q12800 502 aa17.66■□□□□ 0.42
SHCBP1-201ENST00000303383 CCDC85AQ96PX6 553 aaPredicted RBP17.66■□□□□ 0.42
SHCBP1-201ENST00000303383 ERVV-1B6SEH8 477 aa17.66■□□□□ 0.42
SHCBP1-201ENST00000303383 GJD4Q96KN9 370 aaPredicted RBP17.66■□□□□ 0.42
SHCBP1-201ENST00000303383 ESYT1Q9BSJ8 1104 aa17.66■□□□□ 0.42
SHCBP1-201ENST00000303383 RFX5P48382 616 aaPredicted RBP17.66■□□□□ 0.42
SHCBP1-201ENST00000303383 USP26Q9BXU7 913 aa17.66■□□□□ 0.42
SHCBP1-201ENST00000303383 DIAPH3Q9NSV4 1193 aa17.66■□□□□ 0.42
SHCBP1-201ENST00000303383 NLRP10Q86W26 655 aa17.65■□□□□ 0.42
SHCBP1-201ENST00000303383 SLKQ9H2G2 1235 aaPredicted RBP17.65■□□□□ 0.42
SHCBP1-201ENST00000303383 PODXL2Q9NZ53 605 aa17.65■□□□□ 0.42
SHCBP1-201ENST00000303383 ITPK1Q13572 414 aa17.64■□□□□ 0.42
SHCBP1-201ENST00000303383 SPRYD3Q8NCJ5 442 aa17.64■□□□□ 0.42
SHCBP1-201ENST00000303383 TRPC5Q9UL62 973 aaPredicted RBP17.64■□□□□ 0.42
SHCBP1-201ENST00000303383 USP42Q9H9J4 1324 aaKnown RBP17.64■□□□□ 0.41
SHCBP1-201ENST00000303383 HSP90AA1P07900 732 aaKnown RBP17.64■□□□□ 0.41
SHCBP1-201ENST00000303383 NEUROD6Q96NK8 337 aa17.64■□□□□ 0.41
SHCBP1-201ENST00000303383 FAM177BA6PVY3 158 aa17.64■□□□□ 0.41
SHCBP1-201ENST00000303383 EIF5P55010 431 aaKnown RBP17.64■□□□□ 0.41
SHCBP1-201ENST00000303383 FAM182BQ5T319 152 aa17.64■□□□□ 0.41
SHCBP1-201ENST00000303383 KIAA1211Q6ZU35 1233 aa17.64■□□□□ 0.41
SHCBP1-201ENST00000303383 IL15P40933 162 aaPredicted RBP17.63■□□□□ 0.41
SHCBP1-201ENST00000303383 IFIT5Q13325 482 aaKnown RBP17.63■□□□□ 0.41
SHCBP1-201ENST00000303383 TNNI3KQ59H18 835 aa17.63■□□□□ 0.41
SHCBP1-201ENST00000303383 INTS5Q6P9B9 1019 aaKnown RBP17.63■□□□□ 0.41
SHCBP1-201ENST00000303383 FPGT-TNNI3KV9GXZ4 949 aa17.63■□□□□ 0.41
SHCBP1-201ENST00000303383 RUFY2Q8WXA3 655 aa17.63■□□□□ 0.41
SHCBP1-201ENST00000303383 BOLA2Q9H3K6 86 aa17.63■□□□□ 0.41
SHCBP1-201ENST00000303383 ZNF594Q96JF6 807 aaPredicted RBP17.63■□□□□ 0.41
SHCBP1-201ENST00000303383 IRS4O14654 1257 aaPredicted RBP17.62■□□□□ 0.41
SHCBP1-201ENST00000303383 EVI5LQ96CN4 794 aa17.62■□□□□ 0.41
SHCBP1-201ENST00000303383 TLR7Q9NYK1 1049 aaKnown RBP17.62■□□□□ 0.41
SHCBP1-201ENST00000303383 ZNF652Q9Y2D9 606 aa17.62■□□□□ 0.41
SHCBP1-201ENST00000303383 EYA2O00167 538 aa17.62■□□□□ 0.41
SHCBP1-201ENST00000303383 RABEP1Q15276 862 aa17.61■□□□□ 0.41
SHCBP1-201ENST00000303383 CEP126Q9P2H0 1117 aa17.61■□□□□ 0.41
SHCBP1-201ENST00000303383 CWC27Q6UX04 472 aaKnown RBP17.61■□□□□ 0.41
SHCBP1-201ENST00000303383 TJP1Q07157 1748 aa17.61■□□□□ 0.41
SHCBP1-201ENST00000303383 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.6■□□□□ 0.41
SHCBP1-201ENST00000303383 FSD1Q9BTV5 496 aa17.6■□□□□ 0.41
SHCBP1-201ENST00000303383 KCNQ4P56696 695 aa17.6■□□□□ 0.41
SHCBP1-201ENST00000303383 CDHR2Q9BYE9 1310 aa17.6■□□□□ 0.41
SHCBP1-201ENST00000303383 AK9Q5TCS8 1911 aa17.59■□□□□ 0.41
SHCBP1-201ENST00000303383 GORABQ5T7V8 394 aa17.59■□□□□ 0.41
SHCBP1-201ENST00000303383 SYNE4Q8N205 404 aa17.59■□□□□ 0.41
SHCBP1-201ENST00000303383 HIP1O00291 1037 aa17.59■□□□□ 0.41
SHCBP1-201ENST00000303383 PLA2G12BQ9BX93 195 aa17.59■□□□□ 0.41
SHCBP1-201ENST00000303383 QTRT2Q9H974 415 aaKnown RBP17.59■□□□□ 0.41
SHCBP1-201ENST00000303383 NIP7Q9Y221 180 aaKnown RBP eCLIP17.59■□□□□ 0.41
SHCBP1-201ENST00000303383 ANKRD18BA2A2Z9 1011 aa17.59■□□□□ 0.41
SHCBP1-201ENST00000303383 LRRC24Q50LG9 513 aa17.59■□□□□ 0.41
SHCBP1-201ENST00000303383 SEPT12Q8IYM1 358 aa17.59■□□□□ 0.41
SHCBP1-201ENST00000303383 PDE8AO60658 829 aa17.58■□□□□ 0.41
SHCBP1-201ENST00000303383 SNX21Q969T3 373 aa17.58■□□□□ 0.41
SHCBP1-201ENST00000303383 DBNDD2Q9BQY9 259 aa17.58■□□□□ 0.41
SHCBP1-201ENST00000303383 UTP14AQ9BVJ6 771 aaKnown RBP17.58■□□□□ 0.41
SHCBP1-201ENST00000303383 DBNLQ9UJU6 430 aaKnown RBP17.58■□□□□ 0.41
SHCBP1-201ENST00000303383 ST18O60284 1047 aa17.58■□□□□ 0.4
SHCBP1-201ENST00000303383 CTSWP56202 376 aa17.58■□□□□ 0.4
SHCBP1-201ENST00000303383 DNAJC2Q99543 621 aaKnown RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms