RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 APBB1O00213 710 aa14.78□□□□□ -0.04
TPM3-202ENST00000302206 PIP4K2AP48426 406 aaPredicted RBP14.78□□□□□ -0.04
TPM3-202ENST00000302206 PRIM1P49642 420 aaKnown RBP14.78□□□□□ -0.04
TPM3-202ENST00000302206 CASP7P55210 303 aa14.78□□□□□ -0.04
TPM3-202ENST00000302206 TRIM28Q13263 835 aaKnown RBP14.78□□□□□ -0.04
TPM3-202ENST00000302206 TTLL7Q6ZT98 887 aa14.78□□□□□ -0.04
TPM3-202ENST00000302206 RHPN1Q8TCX5 695 aa14.78□□□□□ -0.04
TPM3-202ENST00000302206 H7C1W4 665 aa14.77□□□□□ -0.05
TPM3-202ENST00000302206 CYP19A1P11511 503 aaPredicted RBP14.77□□□□□ -0.05
TPM3-202ENST00000302206 MX1P20591 662 aa14.77□□□□□ -0.05
TPM3-202ENST00000302206 RABL6Q3YEC7 729 aaPredicted RBP14.77□□□□□ -0.05
TPM3-202ENST00000302206 TBC1D9Q6ZT07 1266 aa14.77□□□□□ -0.05
TPM3-202ENST00000302206 CCDC191Q8NCU4 936 aa14.77□□□□□ -0.05
TPM3-202ENST00000302206 RBM42Q9BTD8 480 aaKnown RBP14.77□□□□□ -0.05
TPM3-202ENST00000302206 BICC1Q9H694 974 aaKnown RBP14.77□□□□□ -0.05
TPM3-202ENST00000302206 TUBGCP6Q96RT7 1819 aa14.77□□□□□ -0.05
TPM3-202ENST00000302206 ZNF831Q5JPB2 1677 aa14.77□□□□□ -0.05
TPM3-202ENST00000302206 SBF2Q86WG5 1849 aa14.76□□□□□ -0.05
TPM3-202ENST00000302206 USP42Q9H9J4 1324 aaKnown RBP14.76□□□□□ -0.05
TPM3-202ENST00000302206 PLSCR1O15162 318 aa14.76□□□□□ -0.05
TPM3-202ENST00000302206 SMARCC1Q92922 1105 aaPredicted RBP14.76□□□□□ -0.05
TPM3-202ENST00000302206 ISCA1Q9BUE6 129 aa14.76□□□□□ -0.05
TPM3-202ENST00000302206 C22orf23Q9BZE7 217 aa14.76□□□□□ -0.05
TPM3-202ENST00000302206 CWC25Q9NXE8 425 aaPredicted RBP14.76□□□□□ -0.05
TPM3-202ENST00000302206 A0A087WZG4 1122 aa14.75□□□□□ -0.05
TPM3-202ENST00000302206 ZBTB7AO95365 584 aa14.75□□□□□ -0.05
TPM3-202ENST00000302206 SDSP20132 328 aa14.75□□□□□ -0.05
TPM3-202ENST00000302206 RBM25P49756 843 aaKnown RBP14.75□□□□□ -0.05
TPM3-202ENST00000302206 MFAP1P55081 439 aaKnown RBP14.75□□□□□ -0.05
TPM3-202ENST00000302206 TCIRG1Q13488 830 aa14.75□□□□□ -0.05
TPM3-202ENST00000302206 CASC1Q6TDU7 716 aa14.75□□□□□ -0.05
TPM3-202ENST00000302206 KIF6Q6ZMV9 814 aa14.75□□□□□ -0.05
TPM3-202ENST00000302206 PTF1AQ7RTS3 328 aa14.75□□□□□ -0.05
TPM3-202ENST00000302206 SLC4A9Q96Q91 983 aa14.75□□□□□ -0.05
TPM3-202ENST00000302206 ANO8Q9HCE9 1232 aaPredicted RBP14.75□□□□□ -0.05
TPM3-202ENST00000302206 ATP5J2-PTCD1G3V325 749 aa14.74□□□□□ -0.05
TPM3-202ENST00000302206 MYCNP04198 464 aaPredicted RBP14.74□□□□□ -0.05
TPM3-202ENST00000302206 HOXD11P31277 338 aaPredicted RBP14.74□□□□□ -0.05
TPM3-202ENST00000302206 IL6STP40189 918 aaPredicted RBP14.74□□□□□ -0.05
TPM3-202ENST00000302206 ERICH6Q7L0X2 663 aa14.74□□□□□ -0.05
TPM3-202ENST00000302206 SYTL4Q96C24 671 aaPredicted RBP14.74□□□□□ -0.05
TPM3-202ENST00000302206 BCL11BQ9C0K0 894 aaPredicted RBP14.74□□□□□ -0.05
TPM3-202ENST00000302206 PDGFDQ9GZP0 370 aaPredicted RBP14.74□□□□□ -0.05
TPM3-202ENST00000302206 COPRSQ9NQ92 184 aa14.74□□□□□ -0.05
TPM3-202ENST00000302206 TTC41PQ6P2S7 1318 aa14.73□□□□□ -0.05
TPM3-202ENST00000302206 MAP3K15Q6ZN16 1313 aa14.73□□□□□ -0.05
TPM3-202ENST00000302206 G3BP1Q13283 466 aaKnown RBP eCLIP14.73□□□□□ -0.051e-6■■■□□ 15.5
TPM3-202ENST00000302206 OS9Q13438 667 aaPredicted RBP14.73□□□□□ -0.05
TPM3-202ENST00000302206 HSP90AB3PQ58FF7 597 aa14.73□□□□□ -0.05
TPM3-202ENST00000302206 UBE3BQ7Z3V4 1068 aa14.73□□□□□ -0.05
TPM3-202ENST00000302206 SYT17Q9BSW7 474 aa14.73□□□□□ -0.05
TPM3-202ENST00000302206 ERVV-1B6SEH8 477 aa14.72□□□□□ -0.05
TPM3-202ENST00000302206 PTGER2P43116 358 aa14.72□□□□□ -0.05
TPM3-202ENST00000302206 RFX5P48382 616 aaPredicted RBP14.72□□□□□ -0.05
TPM3-202ENST00000302206 BECN1Q14457 450 aa14.72□□□□□ -0.05
TPM3-202ENST00000302206 EPHA10Q5JZY3 1008 aa14.72□□□□□ -0.05
TPM3-202ENST00000302206 CLASRPQ8N2M8 674 aaKnown RBP14.72□□□□□ -0.05
TPM3-202ENST00000302206 FHDC1Q9C0D6 1143 aaPredicted RBP14.72□□□□□ -0.05
TPM3-202ENST00000302206 ZBTB3Q9H5J0 574 aa14.72□□□□□ -0.05
TPM3-202ENST00000302206 IL1RAPL2Q9NP60 686 aa14.72□□□□□ -0.05
TPM3-202ENST00000302206 ATF5Q9Y2D1 282 aaPredicted RBP14.72□□□□□ -0.05
TPM3-202ENST00000302206 GIGYF2Q6Y7W6 1299 aaKnown RBP14.71□□□□□ -0.05
TPM3-202ENST00000302206 DAXXQ9UER7 740 aaPredicted RBP14.71□□□□□ -0.05
TPM3-202ENST00000302206 ANKRD36CQ5JPF3 1778 aa14.7□□□□□ -0.06
TPM3-202ENST00000302206 PCCAP05165 728 aaPredicted RBP14.7□□□□□ -0.06
TPM3-202ENST00000302206 FOXO4P98177 505 aa14.7□□□□□ -0.06
TPM3-202ENST00000302206 GPATCH3Q96I76 525 aa14.7□□□□□ -0.06
TPM3-202ENST00000302206 PLA2G12BQ9BX93 195 aa14.7□□□□□ -0.06
TPM3-202ENST00000302206 PA2G4Q9UQ80 394 aaKnown RBP14.7□□□□□ -0.06
TPM3-202ENST00000302206 PALLDQ8WX93 1383 aa14.7□□□□□ -0.06
TPM3-202ENST00000302206 LOC102724428A0A0B4J2F2 783 aa14.69□□□□□ -0.06
TPM3-202ENST00000302206 ERC2O15083 957 aa14.69□□□□□ -0.06
TPM3-202ENST00000302206 SASH1O94885 1247 aa14.69□□□□□ -0.06
TPM3-202ENST00000302206 SIK1P57059 783 aa14.69□□□□□ -0.06
TPM3-202ENST00000302206 PI4K2BQ8TCG2 481 aa14.69□□□□□ -0.06
TPM3-202ENST00000302206 ACSBG1Q96GR2 724 aa14.69□□□□□ -0.06
TPM3-202ENST00000302206 CCDC87Q9NVE4 849 aa14.69□□□□□ -0.06
TPM3-202ENST00000302206 STK32BQ9NY57 414 aa14.69□□□□□ -0.06
TPM3-202ENST00000302206 ZBTB1Q9Y2K1 713 aa14.69□□□□□ -0.06
TPM3-202ENST00000302206 CDHR2Q9BYE9 1310 aa14.68□□□□□ -0.06
TPM3-202ENST00000302206 GLRX3O76003 335 aaKnown RBP14.68□□□□□ -0.06
TPM3-202ENST00000302206 REC8O95072 547 aa14.68□□□□□ -0.06
TPM3-202ENST00000302206 EIF5P55010 431 aaKnown RBP14.68□□□□□ -0.06
TPM3-202ENST00000302206 PTPN12Q05209 780 aaKnown RBP14.68□□□□□ -0.06
TPM3-202ENST00000302206 INTS5Q6P9B9 1019 aaKnown RBP14.68□□□□□ -0.06
TPM3-202ENST00000302206 NUTM1Q86Y26 1132 aa14.68□□□□□ -0.06
TPM3-202ENST00000302206 PROM2Q8N271 834 aa14.68□□□□□ -0.06
TPM3-202ENST00000302206 MTFR1LQ9H019 292 aa14.68□□□□□ -0.06
TPM3-202ENST00000302206 NHSQ6T4R5 1651 aa14.68□□□□□ -0.06
TPM3-202ENST00000302206 COL5A3P25940 1745 aaPredicted RBP14.67□□□□□ -0.06
TPM3-202ENST00000302206 EPB41L2O43491 1005 aaKnown RBP14.67□□□□□ -0.06
TPM3-202ENST00000302206 IFIT2P09913 472 aaKnown RBP14.67□□□□□ -0.06
TPM3-202ENST00000302206 ATP6V1AP38606 617 aa14.67□□□□□ -0.06
TPM3-202ENST00000302206 LMBR1LQ6UX01 489 aa14.67□□□□□ -0.06
TPM3-202ENST00000302206 ZBTB38Q8NAP3 1195 aaPredicted RBP14.67□□□□□ -0.06
TPM3-202ENST00000302206 ECHDC1Q9NTX5 307 aa14.67□□□□□ -0.06
TPM3-202ENST00000302206 FBXO3Q9UK99 471 aa14.67□□□□□ -0.06
TPM3-202ENST00000302206 RGL2O15211 777 aa14.66□□□□□ -0.06
TPM3-202ENST00000302206 CRKLP46109 303 aaKnown RBP14.66□□□□□ -0.06
TPM3-202ENST00000302206 SLC15A2Q16348 729 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms