RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 CACNA2D4Q7Z3S7 1137 aa8.02□□□□□ -1.13
GAPVD1-202ENST00000297933 ANKRD2Q9GZV1 360 aa8.02□□□□□ -1.13
GAPVD1-202ENST00000297933 ZNF408Q9H9D4 720 aa8.02□□□□□ -1.13
GAPVD1-202ENST00000297933 TCP11L1Q9NUJ3 509 aa8.02□□□□□ -1.13
GAPVD1-202ENST00000297933 SLC4A4Q9Y6R1 1079 aa8.02□□□□□ -1.13
GAPVD1-202ENST00000297933 EIF4G3O43432 1585 aaKnown RBP8.02□□□□□ -1.13
GAPVD1-202ENST00000297933 DUOX2Q9NRD8 1548 aa8.02□□□□□ -1.13
GAPVD1-202ENST00000297933 AMPD3Q01432 767 aa8.02□□□□□ -1.13
GAPVD1-202ENST00000297933 GUCY1B3Q02153 619 aa8.02□□□□□ -1.13
GAPVD1-202ENST00000297933 VPS36Q86VN1 386 aa8.02□□□□□ -1.13
GAPVD1-202ENST00000297933 PLCD3Q8N3E9 789 aa8.02□□□□□ -1.13
GAPVD1-202ENST00000297933 MRE11P49959 708 aa8.01□□□□□ -1.13
GAPVD1-202ENST00000297933 ATP2B3Q16720 1220 aa8.01□□□□□ -1.13
GAPVD1-202ENST00000297933 IQCEQ6IPM2 695 aa8.01□□□□□ -1.13
GAPVD1-202ENST00000297933 NCOA7Q8NI08 942 aa8.01□□□□□ -1.13
GAPVD1-202ENST00000297933 MBIPQ9NS73 344 aa8.01□□□□□ -1.13
GAPVD1-202ENST00000297933 USP21Q9UK80 565 aa8.01□□□□□ -1.13
GAPVD1-202ENST00000297933 EPB41L2O43491 1005 aaKnown RBP8.01□□□□□ -1.13
GAPVD1-202ENST00000297933 ZMYM3Q14202 1370 aa8.01□□□□□ -1.13
GAPVD1-202ENST00000297933 RARSP54136 660 aaKnown RBP8.01□□□□□ -1.13
GAPVD1-202ENST00000297933 EIF6P56537 245 aaKnown RBP8.01□□□□□ -1.13
GAPVD1-202ENST00000297933 HAND2P61296 217 aa8.01□□□□□ -1.13
GAPVD1-202ENST00000297933 CCT2P78371 535 aaKnown RBP8.01□□□□□ -1.13
GAPVD1-202ENST00000297933 HMGN5P82970 282 aaKnown RBP8.01□□□□□ -1.13
GAPVD1-202ENST00000297933 AXDND1Q5T1B0 1012 aaPredicted RBP8.01□□□□□ -1.13
GAPVD1-202ENST00000297933 SH2B1Q9NRF2 756 aaPredicted RBP8.01□□□□□ -1.13
GAPVD1-202ENST00000297933 IARSP41252 1262 aaKnown RBP8.01□□□□□ -1.13
GAPVD1-202ENST00000297933 EZRP15311 586 aaKnown RBP8□□□□□ -1.13
GAPVD1-202ENST00000297933 PLCG2P16885 1265 aa8□□□□□ -1.13
GAPVD1-202ENST00000297933 KLHL10Q6JEL2 608 aa8□□□□□ -1.13
GAPVD1-202ENST00000297933 ERMNQ8TAM6 284 aa8□□□□□ -1.13
GAPVD1-202ENST00000297933 KRT23Q9C075 422 aa8□□□□□ -1.13
GAPVD1-202ENST00000297933 NCBP1Q09161 790 aaKnown RBP8□□□□□ -1.13
GAPVD1-202ENST00000297933 SPA17Q15506 151 aa8□□□□□ -1.13
GAPVD1-202ENST00000297933 FAM177A1Q8N128 213 aaPredicted RBP8□□□□□ -1.13
GAPVD1-202ENST00000297933 CNBD1Q8NA66 436 aa8□□□□□ -1.13
GAPVD1-202ENST00000297933 NFATC2IPQ8NCF5 419 aa8□□□□□ -1.13
GAPVD1-202ENST00000297933 APBA3O96018 575 aa8□□□□□ -1.13
GAPVD1-202ENST00000297933 METAP2P50579 478 aaKnown RBP eCLIP8□□□□□ -1.13
GAPVD1-202ENST00000297933 CCDC112Q8NEF3 446 aa8□□□□□ -1.13
GAPVD1-202ENST00000297933 SMARCC2Q8TAQ2 1214 aa8□□□□□ -1.13
GAPVD1-202ENST00000297933 FAM98CQ17RN3 349 aaKnown RBP8□□□□□ -1.13
GAPVD1-202ENST00000297933 IFIT1BQ5T764 474 aaKnown RBP8□□□□□ -1.13
GAPVD1-202ENST00000297933 FERMT3Q86UX7 667 aa8□□□□□ -1.13
GAPVD1-202ENST00000297933 FAM43AQ8N2R8 423 aa8□□□□□ -1.13
GAPVD1-202ENST00000297933 LRRC27Q9C0I9 530 aa8□□□□□ -1.13
GAPVD1-202ENST00000297933 MAGEB6P1A0A0J9YX57 407 aa7.99□□□□□ -1.13
GAPVD1-202ENST00000297933 IRS4O14654 1257 aaPredicted RBP7.99□□□□□ -1.13
GAPVD1-202ENST00000297933 WTAPQ15007 396 aa7.99□□□□□ -1.13
GAPVD1-202ENST00000297933 USP16Q9Y5T5 823 aa7.99□□□□□ -1.13
GAPVD1-202ENST00000297933 NKTRP30414 1462 aaKnown RBP7.99□□□□□ -1.13
GAPVD1-202ENST00000297933 TBCAO75347 108 aaKnown RBP7.99□□□□□ -1.13
GAPVD1-202ENST00000297933 TAX1BP1Q86VP1 789 aa7.99□□□□□ -1.13
GAPVD1-202ENST00000297933 DCAF5Q96JK2 942 aa7.99□□□□□ -1.13
GAPVD1-202ENST00000297933 PUF60Q9UHX1 559 aaKnown RBP7.99□□□□□ -1.13
GAPVD1-202ENST00000297933 GCP02774 474 aa7.99□□□□□ -1.13
GAPVD1-202ENST00000297933 FBLN1P23142 703 aa7.99□□□□□ -1.13
GAPVD1-202ENST00000297933 CFAP100Q494V2 611 aa7.99□□□□□ -1.13
GAPVD1-202ENST00000297933 MICU3Q86XE3 530 aa7.99□□□□□ -1.13
GAPVD1-202ENST00000297933 SLC26A6Q9BXS9 759 aa7.99□□□□□ -1.13
GAPVD1-202ENST00000297933 CCDC87Q9NVE4 849 aa7.99□□□□□ -1.13
GAPVD1-202ENST00000297933 TRPM2O94759 1503 aa7.99□□□□□ -1.13
GAPVD1-202ENST00000297933 H0YIN7 160 aa7.99□□□□□ -1.13
GAPVD1-202ENST00000297933 ZFYP08048 801 aaPredicted RBP7.99□□□□□ -1.13
GAPVD1-202ENST00000297933 GPR162Q16538 588 aa7.99□□□□□ -1.13
GAPVD1-202ENST00000297933 CCDC174Q6PII3 467 aa7.99□□□□□ -1.13
GAPVD1-202ENST00000297933 CCDC191Q8NCU4 936 aa7.99□□□□□ -1.13
GAPVD1-202ENST00000297933 THOC2Q8NI27 1593 aaKnown RBP7.99□□□□□ -1.13
GAPVD1-202ENST00000297933 IDEP14735 1019 aa7.99□□□□□ -1.13
GAPVD1-202ENST00000297933 HSP90AA2PQ14568 343 aaPredicted RBP7.99□□□□□ -1.13
GAPVD1-202ENST00000297933 ESR2Q92731 530 aa7.99□□□□□ -1.13
GAPVD1-202ENST00000297933 PICK1Q9NRD5 415 aa7.99□□□□□ -1.13
GAPVD1-202ENST00000297933 KCNA6P17658 529 aa7.98□□□□□ -1.13
GAPVD1-202ENST00000297933 TCERG1LQ5VWI1 586 aa7.98□□□□□ -1.13
GAPVD1-202ENST00000297933 LMBR1LQ6UX01 489 aa7.98□□□□□ -1.13
GAPVD1-202ENST00000297933 TTC16Q8NEE8 873 aa7.98□□□□□ -1.13
GAPVD1-202ENST00000297933 MAP7D2Q96T17 732 aa7.98□□□□□ -1.13
GAPVD1-202ENST00000297933 WDR70Q9NW82 654 aa7.98□□□□□ -1.13
GAPVD1-202ENST00000297933 ITSN2Q9NZM3 1697 aa7.98□□□□□ -1.13
GAPVD1-202ENST00000297933 SYCP2Q9BX26 1530 aa7.98□□□□□ -1.13
GAPVD1-202ENST00000297933 USP8P40818 1118 aa7.98□□□□□ -1.13
GAPVD1-202ENST00000297933 IL15P40933 162 aaPredicted RBP7.98□□□□□ -1.13
GAPVD1-202ENST00000297933 CCDC40Q4G0X9 1142 aa7.98□□□□□ -1.13
GAPVD1-202ENST00000297933 CENPHQ9H3R5 247 aa7.98□□□□□ -1.13
GAPVD1-202ENST00000297933 CNNM2Q9H8M5 875 aa7.98□□□□□ -1.13
GAPVD1-202ENST00000297933 TMOD4Q9NZQ9 345 aa7.98□□□□□ -1.13
GAPVD1-202ENST00000297933 LDHBP07195 334 aaKnown RBP7.98□□□□□ -1.13
GAPVD1-202ENST00000297933 CTNNA2P26232 953 aa7.98□□□□□ -1.13
GAPVD1-202ENST00000297933 CAMK4Q16566 473 aa7.98□□□□□ -1.13
GAPVD1-202ENST00000297933 MAP3K11Q16584 847 aa7.98□□□□□ -1.13
GAPVD1-202ENST00000297933 CNNM3Q8NE01 707 aa7.98□□□□□ -1.13
GAPVD1-202ENST00000297933 COMMD10Q9Y6G5 202 aa7.98□□□□□ -1.13
GAPVD1-202ENST00000297933 ATP10BO94823 1461 aa7.98□□□□□ -1.13
GAPVD1-202ENST00000297933 KSR2Q6VAB6 950 aa7.98□□□□□ -1.13
GAPVD1-202ENST00000297933 HEATR3Q7Z4Q2 680 aa7.98□□□□□ -1.13
GAPVD1-202ENST00000297933 PYM1Q9BRP8 204 aaKnown RBP7.98□□□□□ -1.13
GAPVD1-202ENST00000297933 ABCC10Q5T3U5 1492 aa7.98□□□□□ -1.13
GAPVD1-202ENST00000297933 PABPN1LA6NDY0 278 aaKnown RBP7.98□□□□□ -1.13
GAPVD1-202ENST00000297933 PRC1O43663 620 aa7.98□□□□□ -1.13
GAPVD1-202ENST00000297933 GNAQP50148 359 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms