RNA–Protein interactions for RNA: ENST00000297689.3

NFIL3-201, Transcript of nuclear factor, interleukin 3 regulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFIL3, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3-201ENST00000297689 FOXD4L4Q8WXT5 416 aaPredicted RBP23.83■■□□□ 1.41
NFIL3-201ENST00000297689 RBM27Q9P2N5 1060 aaKnown RBP23.83■■□□□ 1.41
NFIL3-201ENST00000297689 LIMCH1Q9UPQ0 1083 aa23.83■■□□□ 1.41
NFIL3-201ENST00000297689 ERBB4Q15303 1308 aa23.83■■□□□ 1.41
NFIL3-201ENST00000297689 SHANK3Q9BYB0 1731 aa23.83■■□□□ 1.4
NFIL3-201ENST00000297689 EPHA10Q5JZY3 1008 aa23.82■■□□□ 1.4
NFIL3-201ENST00000297689 USP16Q9Y5T5 823 aa23.82■■□□□ 1.4
NFIL3-201ENST00000297689 ESPNB1AK53 854 aa23.82■■□□□ 1.4
NFIL3-201ENST00000297689 WDR33Q9C0J8 1336 aaKnown RBP23.82■■□□□ 1.4
NFIL3-201ENST00000297689 SNRPA1P09661 255 aaKnown RBP23.81■■□□□ 1.4
NFIL3-201ENST00000297689 PRIM1P49642 420 aaKnown RBP23.81■■□□□ 1.4
NFIL3-201ENST00000297689 ZCRB1Q8TBF4 217 aaKnown RBP23.81■■□□□ 1.4
NFIL3-201ENST00000297689 RBSNQ9H1K0 784 aa23.81■■□□□ 1.4
NFIL3-201ENST00000297689 ZSWIM6Q9HCJ5 1215 aa23.81■■□□□ 1.4
NFIL3-201ENST00000297689 CABP4P57796 275 aa23.8■■□□□ 1.4
NFIL3-201ENST00000297689 NEXNQ0ZGT2 675 aa23.8■■□□□ 1.4
NFIL3-201ENST00000297689 CARD10Q9BWT7 1032 aa23.8■■□□□ 1.4
NFIL3-201ENST00000297689 ANO8Q9HCE9 1232 aaPredicted RBP23.8■■□□□ 1.4
NFIL3-201ENST00000297689 MYL6BP14649 208 aa23.8■■□□□ 1.4
NFIL3-201ENST00000297689 ANKRD13DQ6ZTN6 518 aa23.8■■□□□ 1.4
NFIL3-201ENST00000297689 CCDC171Q6TFL3 1326 aa23.79■■□□□ 1.4
NFIL3-201ENST00000297689 RFX5P48382 616 aaPredicted RBP23.79■■□□□ 1.4
NFIL3-201ENST00000297689 ADCK5Q3MIX3 580 aa23.79■■□□□ 1.4
NFIL3-201ENST00000297689 LRSAM1Q6UWE0 723 aa23.79■■□□□ 1.4
NFIL3-201ENST00000297689 MAP4K1Q92918 833 aa23.79■■□□□ 1.4
NFIL3-201ENST00000297689 COPRSQ9NQ92 184 aa23.79■■□□□ 1.4
NFIL3-201ENST00000297689 TLR7Q9NYK1 1049 aaKnown RBP23.79■■□□□ 1.4
NFIL3-201ENST00000297689 PCDH11XQ9BZA7 1347 aa23.79■■□□□ 1.4
NFIL3-201ENST00000297689 PCDH11YQ9BZA8 1340 aa23.79■■□□□ 1.4
NFIL3-201ENST00000297689 HIP1O00291 1037 aa23.79■■□□□ 1.4
NFIL3-201ENST00000297689 VPS53Q5VIR6 699 aa23.79■■□□□ 1.4
NFIL3-201ENST00000297689 TMEM87AQ8NBN3 555 aa23.79■■□□□ 1.4
NFIL3-201ENST00000297689 CCDC8Q9H0W5 538 aaPredicted RBP23.79■■□□□ 1.4
NFIL3-201ENST00000297689 RABL6Q3YEC7 729 aaPredicted RBP23.78■■□□□ 1.4
NFIL3-201ENST00000297689 TTC5Q8N0Z6 440 aa23.78■■□□□ 1.4
NFIL3-201ENST00000297689 MYD88Q99836 296 aa23.78■■□□□ 1.4
NFIL3-201ENST00000297689 CASTP20810 708 aaKnown RBP23.77■■□□□ 1.4
NFIL3-201ENST00000297689 FMNL2Q96PY5 1086 aa23.77■■□□□ 1.4
NFIL3-201ENST00000297689 STRN4Q9NRL3 753 aa23.77■■□□□ 1.4
NFIL3-201ENST00000297689 PRPF40BQ6NWY9 871 aaKnown RBP23.77■■□□□ 1.4
NFIL3-201ENST00000297689 JCADQ9P266 1359 aa23.77■■□□□ 1.39
NFIL3-201ENST00000297689 LAMB4A4D0S4 1761 aa23.76■■□□□ 1.39
NFIL3-201ENST00000297689 TOM1O60784 492 aa23.76■■□□□ 1.39
NFIL3-201ENST00000297689 IL2RBP14784 551 aa23.76■■□□□ 1.39
NFIL3-201ENST00000297689 CPA1P15085 419 aa23.76■■□□□ 1.39
NFIL3-201ENST00000297689 KLHDC4Q8TBB5 520 aa23.76■■□□□ 1.39
NFIL3-201ENST00000297689 PDLIM2Q96JY6 352 aa23.76■■□□□ 1.39
NFIL3-201ENST00000297689 FAM227BQ96M60 508 aa23.76■■□□□ 1.39
NFIL3-201ENST00000297689 LARGE1O95461 756 aa23.75■■□□□ 1.39
NFIL3-201ENST00000297689 NMIQ13287 307 aaPredicted RBP23.75■■□□□ 1.39
NFIL3-201ENST00000297689 NKX1-1Q15270 411 aaPredicted RBP23.75■■□□□ 1.39
NFIL3-201ENST00000297689 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.75■■□□□ 1.39
NFIL3-201ENST00000297689 UBR2Q8IWV8 1755 aa23.75■■□□□ 1.39
NFIL3-201ENST00000297689 PIP4K2AP48426 406 aaPredicted RBP23.75■■□□□ 1.39
NFIL3-201ENST00000297689 CASP7P55210 303 aa23.75■■□□□ 1.39
NFIL3-201ENST00000297689 PTPN12Q05209 780 aaKnown RBP23.75■■□□□ 1.39
NFIL3-201ENST00000297689 TRIM44Q96DX7 344 aaPredicted RBP23.75■■□□□ 1.39
NFIL3-201ENST00000297689 MED23Q9ULK4 1368 aa23.75■■□□□ 1.39
NFIL3-201ENST00000297689 ARFGEF2Q9Y6D5 1785 aa23.75■■□□□ 1.39
NFIL3-201ENST00000297689 TCHHQ07283 1943 aa23.74■■□□□ 1.39
NFIL3-201ENST00000297689 SIL1Q9H173 461 aa23.74■■□□□ 1.39
NFIL3-201ENST00000297689 RBM8AQ9Y5S9 174 aaKnown RBP23.74■■□□□ 1.39
NFIL3-201ENST00000297689 ZSCAN22P10073 491 aaPredicted RBP23.74■■□□□ 1.39
NFIL3-201ENST00000297689 SYT1P21579 422 aa23.74■■□□□ 1.39
NFIL3-201ENST00000297689 JAKMIP1Q96N16 626 aaKnown RBP23.74■■□□□ 1.39
NFIL3-201ENST00000297689 PDRG1Q9NUG6 133 aa23.74■■□□□ 1.39
NFIL3-201ENST00000297689 PAPPAQ13219 1627 aa23.73■■□□□ 1.39
NFIL3-201ENST00000297689 EVA1CP58658 441 aa23.73■■□□□ 1.39
NFIL3-201ENST00000297689 CREB3L3Q68CJ9 461 aa23.73■■□□□ 1.39
NFIL3-201ENST00000297689 ZSCAN31Q96LW9 406 aaPredicted RBP23.73■■□□□ 1.39
NFIL3-201ENST00000297689 SYCE3A1L190 88 aa23.72■■□□□ 1.39
NFIL3-201ENST00000297689 ST3GAL1Q11201 340 aa23.72■■□□□ 1.39
NFIL3-201ENST00000297689 USP48Q86UV5 1035 aa23.72■■□□□ 1.39
NFIL3-201ENST00000297689 LARP6Q9BRS8 491 aaKnown RBP23.72■■□□□ 1.39
NFIL3-201ENST00000297689 BOLA2Q9H3K6 86 aa23.72■■□□□ 1.39
NFIL3-201ENST00000297689 SH2B1Q9NRF2 756 aaPredicted RBP23.72■■□□□ 1.39
NFIL3-201ENST00000297689 CYP46A1Q9Y6A2 500 aa23.72■■□□□ 1.39
NFIL3-201ENST00000297689 A0A0D9SFI3 127 aa23.72■■□□□ 1.39
NFIL3-201ENST00000297689 ERVV-2B6SEH9 535 aa23.72■■□□□ 1.39
NFIL3-201ENST00000297689 STX6O43752 255 aa23.72■■□□□ 1.39
NFIL3-201ENST00000297689 GADD45BO75293 160 aaPredicted RBP23.72■■□□□ 1.39
NFIL3-201ENST00000297689 AFDNP55196 1824 aaKnown RBP23.72■■□□□ 1.39
NFIL3-201ENST00000297689 KCPQ6ZWJ8 1503 aa23.71■■□□□ 1.39
NFIL3-201ENST00000297689 TOGARAM1Q9Y4F4 1720 aa23.71■■□□□ 1.39
NFIL3-201ENST00000297689 ATP5JP18859 108 aa23.71■■□□□ 1.39
NFIL3-201ENST00000297689 DDX54Q8TDD1 881 aaKnown RBP23.71■■□□□ 1.39
NFIL3-201ENST00000297689 COL16A1Q07092 1604 aaPredicted RBP23.71■■□□□ 1.39
NFIL3-201ENST00000297689 SLC27A2O14975 620 aa23.7■■□□□ 1.38
NFIL3-201ENST00000297689 ZKSCAN1P17029 563 aaPredicted RBP23.7■■□□□ 1.38
NFIL3-201ENST00000297689 PIP4K2BP78356 416 aa23.7■■□□□ 1.38
NFIL3-201ENST00000297689 TSGA10IPQ3SY00 556 aa23.7■■□□□ 1.38
NFIL3-201ENST00000297689 PLBD2Q8NHP8 589 aa23.7■■□□□ 1.38
NFIL3-201ENST00000297689 ANP32BQ92688 251 aaKnown RBP23.7■■□□□ 1.38
NFIL3-201ENST00000297689 ALDH8A1Q9H2A2 487 aaPredicted RBP23.7■■□□□ 1.38
NFIL3-201ENST00000297689 SMC3Q9UQE7 1217 aa23.7■■□□□ 1.38
NFIL3-201ENST00000297689 COL22A1Q8NFW1 1626 aaPredicted RBP23.7■■□□□ 1.38
NFIL3-201ENST00000297689 PHLPP1O60346 1717 aa23.69■■□□□ 1.38
NFIL3-201ENST00000297689 HS1BP3Q53T59 392 aa23.69■■□□□ 1.38
NFIL3-201ENST00000297689 GDPD2Q9HCC8 539 aa23.69■■□□□ 1.38
NFIL3-201ENST00000297689 DBNLQ9UJU6 430 aaKnown RBP23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms