RNA–Protein interactions for RNA: ENST00000296137.6

FYCO1-201, Transcript of FYVE and coiled-coil domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene FYCO1, Length 8,504 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1-201ENST00000296137 VCX3AQ9NNX9 186 aa12.55□□□□□ -0.4
FYCO1-201ENST00000296137 EFCAB13Q8IY85 973 aa12.55□□□□□ -0.4
FYCO1-201ENST00000296137 FAF1Q9UNN5 650 aaPredicted RBP12.55□□□□□ -0.4
FYCO1-201ENST00000296137 MX1P20591 662 aa12.55□□□□□ -0.4
FYCO1-201ENST00000296137 ZHX3Q9H4I2 956 aa12.55□□□□□ -0.4
FYCO1-201ENST00000296137 ODF2LQ9ULJ1 636 aa12.55□□□□□ -0.4
FYCO1-201ENST00000296137 JRKLQ9Y4A0 524 aa12.55□□□□□ -0.4
FYCO1-201ENST00000296137 PPP2R3AQ06190 1150 aa12.55□□□□□ -0.4
FYCO1-201ENST00000296137 LARSQ9P2J5 1176 aaKnown RBP12.55□□□□□ -0.4
FYCO1-201ENST00000296137 RIPOR2Q9Y4F9 1068 aa12.55□□□□□ -0.4
FYCO1-201ENST00000296137 RAPGEF2Q9Y4G8 1499 aa12.55□□□□□ -0.4
FYCO1-201ENST00000296137 ZC3H6P61129 1189 aaKnown RBP12.55□□□□□ -0.4
FYCO1-201ENST00000296137 KLHDC4Q8TBB5 520 aa12.55□□□□□ -0.4
FYCO1-201ENST00000296137 THEGQ9P2T0 379 aa12.55□□□□□ -0.4
FYCO1-201ENST00000296137 SYT1P21579 422 aa12.55□□□□□ -0.4
FYCO1-201ENST00000296137 ATP5DP30049 168 aa12.55□□□□□ -0.4
FYCO1-201ENST00000296137 RASSF2P50749 326 aa12.55□□□□□ -0.4
FYCO1-201ENST00000296137 TDRD12Q587J7 1177 aaKnown RBP12.55□□□□□ -0.4
FYCO1-201ENST00000296137 WWC2Q6AWC2 1192 aa12.55□□□□□ -0.4
FYCO1-201ENST00000296137 TTC5Q8N0Z6 440 aa12.55□□□□□ -0.4
FYCO1-201ENST00000296137 ARHGAP24Q8N264 748 aa12.55□□□□□ -0.4
FYCO1-201ENST00000296137 WASF1Q92558 559 aa12.55□□□□□ -0.4
FYCO1-201ENST00000296137 ARHGEF2Q92974 986 aaKnown RBP12.55□□□□□ -0.4
FYCO1-201ENST00000296137 COG3Q96JB2 828 aa12.55□□□□□ -0.4
FYCO1-201ENST00000296137 JAKMIP1Q96N16 626 aaKnown RBP12.55□□□□□ -0.4
FYCO1-201ENST00000296137 TSNARE1Q96NA8 513 aa12.55□□□□□ -0.4
FYCO1-201ENST00000296137 FAM200AQ8TCP9 573 aa12.54□□□□□ -0.4
FYCO1-201ENST00000296137 RHOXF2BP0C7M4 288 aa12.54□□□□□ -0.4
FYCO1-201ENST00000296137 PRIM1P49642 420 aaKnown RBP12.54□□□□□ -0.4
FYCO1-201ENST00000296137 BIRC2Q13490 618 aa12.54□□□□□ -0.4
FYCO1-201ENST00000296137 RHOXF2Q9BQY4 288 aa12.54□□□□□ -0.4
FYCO1-201ENST00000296137 SLC3A2P08195 630 aaKnown RBP12.54□□□□□ -0.4
FYCO1-201ENST00000296137 EVCP57679 992 aa12.54□□□□□ -0.4
FYCO1-201ENST00000296137 RAB11FIP4Q86YS3 637 aa12.54□□□□□ -0.4
FYCO1-201ENST00000296137 CPLX3Q8WVH0 158 aa12.54□□□□□ -0.4
FYCO1-201ENST00000296137 CCDC69A6NI79 296 aa12.54□□□□□ -0.4
FYCO1-201ENST00000296137 CCDC57Q2TAC2 916 aa12.54□□□□□ -0.4
FYCO1-201ENST00000296137 LRRC43Q8N309 656 aa12.54□□□□□ -0.4
FYCO1-201ENST00000296137 CTAGE1Q96RT6 745 aa12.54□□□□□ -0.4
FYCO1-201ENST00000296137 TSG101Q99816 390 aa12.54□□□□□ -0.4
FYCO1-201ENST00000296137 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.54□□□□□ -0.48e-7■■■■□ 22.8
FYCO1-201ENST00000296137 ATAD2Q6PL18 1390 aa12.54□□□□□ -0.4
FYCO1-201ENST00000296137 PNMA8AQ86V59 439 aaPredicted RBP12.54□□□□□ -0.4
FYCO1-201ENST00000296137 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.54□□□□□ -0.4
FYCO1-201ENST00000296137 XAB2Q9HCS7 855 aaKnown RBP12.54□□□□□ -0.4
FYCO1-201ENST00000296137 OPHN1O60890 802 aa12.53□□□□□ -0.4
FYCO1-201ENST00000296137 KIF5AQ12840 1032 aa12.53□□□□□ -0.4
FYCO1-201ENST00000296137 CCDC186Q7Z3E2 898 aa12.53□□□□□ -0.4
FYCO1-201ENST00000296137 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.53□□□□□ -0.4
FYCO1-201ENST00000296137 NOP2P46087 812 aaKnown RBP12.53□□□□□ -0.4
FYCO1-201ENST00000296137 PLVAPQ9BX97 442 aa12.53□□□□□ -0.4
FYCO1-201ENST00000296137 BAIAP2L1Q9UHR4 511 aa12.53□□□□□ -0.4
FYCO1-201ENST00000296137 VIMP08670 466 aaKnown RBP12.53□□□□□ -0.4
FYCO1-201ENST00000296137 TEFQ10587 303 aa12.53□□□□□ -0.4
FYCO1-201ENST00000296137 CCDC77Q9BR77 488 aa12.53□□□□□ -0.4
FYCO1-201ENST00000296137 SCAPERQ9BY12 1400 aa12.53□□□□□ -0.4
FYCO1-201ENST00000296137 MACROD2A1Z1Q3 448 aa12.53□□□□□ -0.4
FYCO1-201ENST00000296137 MCUR1Q96AQ8 359 aa12.53□□□□□ -0.4
FYCO1-201ENST00000296137 EPSTI1Q96J88 318 aa12.53□□□□□ -0.4
FYCO1-201ENST00000296137 POLA1P09884 1462 aaPredicted RBP12.53□□□□□ -0.4
FYCO1-201ENST00000296137 BICDL2A1A5D9 508 aa12.53□□□□□ -0.4
FYCO1-201ENST00000296137 PPFIA3O75145 1194 aa12.53□□□□□ -0.4
FYCO1-201ENST00000296137 CTNNA2P26232 953 aa12.53□□□□□ -0.4
FYCO1-201ENST00000296137 TMED1Q13445 227 aa12.53□□□□□ -0.4
FYCO1-201ENST00000296137 CDCA7LQ96GN5 454 aa12.53□□□□□ -0.4
FYCO1-201ENST00000296137 CCDC88BA6NC98 1476 aa12.53□□□□□ -0.4
FYCO1-201ENST00000296137 HPDP32754 393 aaPredicted RBP12.53□□□□□ -0.4
FYCO1-201ENST00000296137 CNNM3Q8NE01 707 aa12.53□□□□□ -0.4
FYCO1-201ENST00000296137 PRPF31Q8WWY3 499 aaKnown RBP12.53□□□□□ -0.4
FYCO1-201ENST00000296137 GNAI2P04899 355 aa12.52□□□□□ -0.4
FYCO1-201ENST00000296137 IRX4P78413 519 aa12.52□□□□□ -0.4
FYCO1-201ENST00000296137 ELF2Q15723 593 aa12.52□□□□□ -0.4
FYCO1-201ENST00000296137 TMCO4Q5TGY1 634 aa12.52□□□□□ -0.4
FYCO1-201ENST00000296137 DNAI2Q9GZS0 605 aa12.52□□□□□ -0.41
FYCO1-201ENST00000296137 GNAI3P08754 354 aa12.52□□□□□ -0.41
FYCO1-201ENST00000296137 CCDC62Q6P9F0 684 aa12.52□□□□□ -0.41
FYCO1-201ENST00000296137 LTV1Q96GA3 475 aaPredicted RBP12.52□□□□□ -0.41
FYCO1-201ENST00000296137 MIA2Q96PC5 1412 aa12.52□□□□□ -0.41
FYCO1-201ENST00000296137 GKAP1Q5VSY0 366 aaPredicted RBP12.52□□□□□ -0.41
FYCO1-201ENST00000296137 GIMAP6Q6P9H5 292 aa12.52□□□□□ -0.41
FYCO1-201ENST00000296137 TMEM132AQ24JP5 1023 aa12.52□□□□□ -0.41
FYCO1-201ENST00000296137 PIBF1Q8WXW3 757 aa12.52□□□□□ -0.41
FYCO1-201ENST00000296137 C1orf115Q9H7X2 142 aa12.52□□□□□ -0.41
FYCO1-201ENST00000296137 NOB1Q9ULX3 412 aaKnown RBP12.52□□□□□ -0.41
FYCO1-201ENST00000296137 DNAJC8O75937 253 aaPredicted RBP12.52□□□□□ -0.41
FYCO1-201ENST00000296137 TRIM21P19474 475 aaKnown RBP12.52□□□□□ -0.41
FYCO1-201ENST00000296137 SH3GL3Q99963 347 aa12.52□□□□□ -0.41
FYCO1-201ENST00000296137 MGEA5O60502 916 aa12.51□□□□□ -0.41
FYCO1-201ENST00000296137 HIP1RO75146 1068 aa12.51□□□□□ -0.41
FYCO1-201ENST00000296137 NEUROD6Q96NK8 337 aa12.51□□□□□ -0.41
FYCO1-201ENST00000296137 TSGA10Q9BZW7 698 aa12.51□□□□□ -0.41
FYCO1-201ENST00000296137 RASIP1Q5U651 963 aa12.51□□□□□ -0.41
FYCO1-201ENST00000296137 GIGYF1O75420 1035 aaPredicted RBP12.51□□□□□ -0.41
FYCO1-201ENST00000296137 SRGAP3O43295 1099 aa12.51□□□□□ -0.41
FYCO1-201ENST00000296137 EIF2S2P20042 333 aaKnown RBP12.51□□□□□ -0.41
FYCO1-201ENST00000296137 FYB2Q5VWT5 728 aa12.51□□□□□ -0.41
FYCO1-201ENST00000296137 ABTB1Q969K4 478 aaPredicted RBP12.51□□□□□ -0.41
FYCO1-201ENST00000296137 TBC1D32Q96NH3 1257 aa12.51□□□□□ -0.41
FYCO1-201ENST00000296137 CYLC1P35663 651 aaPredicted RBP12.51□□□□□ -0.41
FYCO1-201ENST00000296137 SMARCC2Q8TAQ2 1214 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms