RNA–Protein interactions for RNA: ENST00000295057.3

LRRTM1-201, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRTM1, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-201ENST00000295057 PTCD1O75127 700 aaKnown RBP18.37■□□□□ 0.53
LRRTM1-201ENST00000295057 SNRPA1P09661 255 aaKnown RBP18.37■□□□□ 0.53
LRRTM1-201ENST00000295057 BBXQ8WY36 941 aaPredicted RBP18.37■□□□□ 0.53
LRRTM1-201ENST00000295057 IL1RAPL2Q9NP60 686 aa18.37■□□□□ 0.53
LRRTM1-201ENST00000295057 PALD1Q9ULE6 856 aa18.37■□□□□ 0.53
LRRTM1-201ENST00000295057 SRGAP3O43295 1099 aa18.37■□□□□ 0.53
LRRTM1-201ENST00000295057 FMNL2Q96PY5 1086 aa18.37■□□□□ 0.53
LRRTM1-201ENST00000295057 ATP2B3Q16720 1220 aa18.37■□□□□ 0.53
LRRTM1-201ENST00000295057 CHMP4AQ9BY43 222 aa18.37■□□□□ 0.53
LRRTM1-201ENST00000295057 GTPBP4Q9BZE4 634 aaKnown RBP18.37■□□□□ 0.53
LRRTM1-201ENST00000295057 C9orf78Q9NZ63 289 aaPredicted RBP18.37■□□□□ 0.53
LRRTM1-201ENST00000295057 AHDC1Q5TGY3 1603 aaPredicted RBP18.36■□□□□ 0.53
LRRTM1-201ENST00000295057 ADAMTS2O95450 1211 aa18.36■□□□□ 0.53
LRRTM1-201ENST00000295057 RIC3Q7Z5B4 369 aa18.36■□□□□ 0.53
LRRTM1-201ENST00000295057 ROBO1Q9Y6N7 1651 aa18.36■□□□□ 0.53
LRRTM1-201ENST00000295057 USP48Q86UV5 1035 aa18.36■□□□□ 0.53
LRRTM1-201ENST00000295057 PRIMPOLQ96LW4 560 aa18.36■□□□□ 0.53
LRRTM1-201ENST00000295057 SURF6O75683 361 aaKnown RBP18.35■□□□□ 0.53
LRRTM1-201ENST00000295057 PIP4K2BP78356 416 aa18.35■□□□□ 0.53
LRRTM1-201ENST00000295057 PPP4R3BQ5MIZ7 849 aa18.35■□□□□ 0.53
LRRTM1-201ENST00000295057 LRRCC1Q9C099 1032 aa18.35■□□□□ 0.53
LRRTM1-201ENST00000295057 KIF20AO95235 890 aa18.35■□□□□ 0.53
LRRTM1-201ENST00000295057 ADCY5O95622 1261 aa18.35■□□□□ 0.53
LRRTM1-201ENST00000295057 IGKV5-2P06315 115 aa18.35■□□□□ 0.53
LRRTM1-201ENST00000295057 LRP10Q7Z4F1 713 aa18.35■□□□□ 0.53
LRRTM1-201ENST00000295057 SSH3Q8TE77 659 aa18.35■□□□□ 0.53
LRRTM1-201ENST00000295057 SYAP1Q96A49 352 aaPredicted RBP18.35■□□□□ 0.53
LRRTM1-201ENST00000295057 MRC1P22897 1456 aa18.34■□□□□ 0.53
LRRTM1-201ENST00000295057 TOM1O60784 492 aa18.34■□□□□ 0.53
LRRTM1-201ENST00000295057 CUL4AQ13619 759 aa18.34■□□□□ 0.53
LRRTM1-201ENST00000295057 GTF2F1P35269 517 aaKnown RBP eCLIP18.34■□□□□ 0.53
LRRTM1-201ENST00000295057 PDE1AP54750 535 aa18.34■□□□□ 0.53
LRRTM1-201ENST00000295057 HMGN5P82970 282 aaKnown RBP18.33■□□□□ 0.52
LRRTM1-201ENST00000295057 MYD88Q99836 296 aa18.33■□□□□ 0.52
LRRTM1-201ENST00000295057 GTF2E1P29083 439 aaPredicted RBP18.33■□□□□ 0.52
LRRTM1-201ENST00000295057 TCHHQ07283 1943 aa18.32■□□□□ 0.52
LRRTM1-201ENST00000295057 NBPF26B4DH59 902 aa18.32■□□□□ 0.52
LRRTM1-201ENST00000295057 HCLS1P14317 486 aaPredicted RBP18.32■□□□□ 0.52
LRRTM1-201ENST00000295057 POLA2Q14181 598 aa18.32■□□□□ 0.52
LRRTM1-201ENST00000295057 NBPF14Q5TI25 921 aa18.32■□□□□ 0.52
LRRTM1-201ENST00000295057 NBPF10Q6P3W6 841 aaKnown RBP18.32■□□□□ 0.52
LRRTM1-201ENST00000295057 NUTM1Q86Y26 1132 aa18.32■□□□□ 0.52
LRRTM1-201ENST00000295057 NBPF15Q8N660 670 aa18.32■□□□□ 0.52
LRRTM1-201ENST00000295057 KAZALD1Q96I82 304 aa18.32■□□□□ 0.52
LRRTM1-201ENST00000295057 DDX58O95786 925 aaKnown RBP18.32■□□□□ 0.52
LRRTM1-201ENST00000295057 A1BGP04217 495 aa18.32■□□□□ 0.52
LRRTM1-201ENST00000295057 SUCLG2Q96I99 432 aa18.32■□□□□ 0.52
LRRTM1-201ENST00000295057 UPF3BQ9BZI7 483 aaKnown RBP18.32■□□□□ 0.52
LRRTM1-201ENST00000295057 BCL2L12Q9HB09 334 aa18.32■□□□□ 0.52
LRRTM1-201ENST00000295057 PA2G4Q9UQ80 394 aaKnown RBP18.32■□□□□ 0.52
LRRTM1-201ENST00000295057 KIF3AQ9Y496 699 aa18.32■□□□□ 0.52
LRRTM1-201ENST00000295057 SPDYE4A6NLX3 237 aa18.31■□□□□ 0.52
LRRTM1-201ENST00000295057 NKX1-1Q15270 411 aaPredicted RBP18.31■□□□□ 0.52
LRRTM1-201ENST00000295057 LINS1Q8NG48 757 aa18.31■□□□□ 0.52
LRRTM1-201ENST00000295057 NUTM2BA6NNL0 878 aaPredicted RBP18.31■□□□□ 0.52
LRRTM1-201ENST00000295057 NUTM2EB1AL46 878 aaPredicted RBP18.31■□□□□ 0.52
LRRTM1-201ENST00000295057 ERVV-2B6SEH9 535 aa18.31■□□□□ 0.52
LRRTM1-201ENST00000295057 ATP5J2-PTCD1G3V325 749 aa18.31■□□□□ 0.52
LRRTM1-201ENST00000295057 LETM1O95202 739 aaPredicted RBP18.31■□□□□ 0.52
LRRTM1-201ENST00000295057 ANKRD13DQ6ZTN6 518 aa18.31■□□□□ 0.52
LRRTM1-201ENST00000295057 NUTM2AQ8IVF1 878 aaPredicted RBP18.31■□□□□ 0.52
LRRTM1-201ENST00000295057 N4BP2Q86UW6 1770 aaPredicted RBP18.3■□□□□ 0.52
LRRTM1-201ENST00000295057 ALDH1L1O75891 902 aa18.3■□□□□ 0.52
LRRTM1-201ENST00000295057 PHF14O94880 888 aa18.3■□□□□ 0.52
LRRTM1-201ENST00000295057 PARP4Q9UKK3 1724 aaKnown RBP18.3■□□□□ 0.52
LRRTM1-201ENST00000295057 GRM8O00222 908 aa18.3■□□□□ 0.52
LRRTM1-201ENST00000295057 SALL3Q9BXA9 1300 aa18.29■□□□□ 0.52
LRRTM1-201ENST00000295057 PLCB2Q00722 1185 aa18.29■□□□□ 0.52
LRRTM1-201ENST00000295057 ESYT1Q9BSJ8 1104 aa18.29■□□□□ 0.52
LRRTM1-201ENST00000295057 ASAP1Q9ULH1 1129 aa18.29■□□□□ 0.52
LRRTM1-201ENST00000295057 NEURL1BA8MQ27 555 aa18.29■□□□□ 0.52
LRRTM1-201ENST00000295057 MX1P20591 662 aa18.29■□□□□ 0.52
LRRTM1-201ENST00000295057 MCM2P49736 904 aa18.29■□□□□ 0.52
LRRTM1-201ENST00000295057 BICC1Q9H694 974 aaKnown RBP18.29■□□□□ 0.52
LRRTM1-201ENST00000295057 SPTLC3Q9NUV7 552 aa18.29■□□□□ 0.52
LRRTM1-201ENST00000295057 UVSSAQ2YD98 709 aa18.28■□□□□ 0.52
LRRTM1-201ENST00000295057 TTLL7Q6ZT98 887 aa18.28■□□□□ 0.52
LRRTM1-201ENST00000295057 FAM184AQ8NB25 1140 aa18.28■□□□□ 0.52
LRRTM1-201ENST00000295057 INTS4Q96HW7 963 aaKnown RBP18.28■□□□□ 0.52
LRRTM1-201ENST00000295057 ANO2Q9NQ90 1003 aa18.28■□□□□ 0.52
LRRTM1-201ENST00000295057 EPHA10Q5JZY3 1008 aa18.28■□□□□ 0.52
LRRTM1-201ENST00000295057 KLHDC4Q8TBB5 520 aa18.28■□□□□ 0.52
LRRTM1-201ENST00000295057 RHPN1Q8TCX5 695 aa18.28■□□□□ 0.52
LRRTM1-201ENST00000295057 CNPY2Q9Y2B0 182 aa18.28■□□□□ 0.52
LRRTM1-201ENST00000295057 GLI3P10071 1580 aa18.27■□□□□ 0.52
LRRTM1-201ENST00000295057 MAP4K4O95819 1239 aaPredicted RBP18.27■□□□□ 0.52
LRRTM1-201ENST00000295057 PIGBQ92521 554 aa18.27■□□□□ 0.52
LRRTM1-201ENST00000295057 METTL22Q9BUU2 404 aaPredicted RBP18.27■□□□□ 0.52
LRRTM1-201ENST00000295057 TMOD3Q9NYL9 352 aa18.27■□□□□ 0.52
LRRTM1-201ENST00000295057 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.27■□□□□ 0.52
LRRTM1-201ENST00000295057 SHANK3Q9BYB0 1731 aa18.27■□□□□ 0.52
LRRTM1-201ENST00000295057 PLEKHG2Q9H7P9 1386 aa18.27■□□□□ 0.52
LRRTM1-201ENST00000295057 AP5Z1O43299 807 aa18.27■□□□□ 0.51
LRRTM1-201ENST00000295057 UNC5CLQ8IV45 518 aa18.27■□□□□ 0.51
LRRTM1-201ENST00000295057 GCKRQ14397 625 aa18.26■□□□□ 0.51
LRRTM1-201ENST00000295057 OSBPL3Q9H4L5 887 aa18.26■□□□□ 0.51
LRRTM1-201ENST00000295057 ZNF330Q9Y3S2 320 aaPredicted RBP18.26■□□□□ 0.51
LRRTM1-201ENST00000295057 IGSF3O75054 1194 aa18.26■□□□□ 0.51
LRRTM1-201ENST00000295057 NEXNQ0ZGT2 675 aa18.26■□□□□ 0.51
LRRTM1-201ENST00000295057 OS9Q13438 667 aaPredicted RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms