RNA–Protein interactions for RNA: ENST00000276585.8

MRPS28-201, Transcript of mitochondrial ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS28, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-201ENST00000276585 SCN7AQ01118 1682 aa16.45■□□□□ 0.22
MRPS28-201ENST00000276585 PHACTR3Q96KR7 559 aa16.44■□□□□ 0.22
MRPS28-201ENST00000276585 CFAP53Q96M91 514 aa16.44■□□□□ 0.22
MRPS28-201ENST00000276585 SAGE1Q9NXZ1 904 aa16.44■□□□□ 0.22
MRPS28-201ENST00000276585 HPS5Q9UPZ3 1129 aa16.44■□□□□ 0.22
MRPS28-201ENST00000276585 PRKAR2BP31323 418 aa16.43■□□□□ 0.22
MRPS28-201ENST00000276585 NBPF5PQ86XG9 351 aaPredicted RBP16.43■□□□□ 0.22
MRPS28-201ENST00000276585 ADARB2Q9NS39 739 aaKnown RBP16.43■□□□□ 0.22
MRPS28-201ENST00000276585 CEMIPQ8WUJ3 1361 aa16.42■□□□□ 0.22
MRPS28-201ENST00000276585 TRPA1O75762 1119 aa16.42■□□□□ 0.22
MRPS28-201ENST00000276585 HUNKP57058 714 aa16.42■□□□□ 0.22
MRPS28-201ENST00000276585 BCORQ6W2J9 1755 aa16.41■□□□□ 0.22
MRPS28-201ENST00000276585 LARGE2Q8N3Y3 721 aa16.41■□□□□ 0.22
MRPS28-201ENST00000276585 IL17REQ8NFR9 667 aa16.41■□□□□ 0.22
MRPS28-201ENST00000276585 PSMD1Q99460 953 aa16.41■□□□□ 0.22
MRPS28-201ENST00000276585 ALDH1B1P30837 517 aa16.4■□□□□ 0.22
MRPS28-201ENST00000276585 TTC5Q8N0Z6 440 aa16.4■□□□□ 0.22
MRPS28-201ENST00000276585 GAS2L2Q8NHY3 880 aa16.4■□□□□ 0.22
MRPS28-201ENST00000276585 RNF186Q9NXI6 227 aa16.4■□□□□ 0.22
MRPS28-201ENST00000276585 CAMTA2O94983 1202 aa16.39■□□□□ 0.21
MRPS28-201ENST00000276585 U2AF1L5P0DN76 240 aaPredicted RBP16.39■□□□□ 0.21
MRPS28-201ENST00000276585 FXR1P51114 621 aaKnown RBP eCLIP16.39■□□□□ 0.21
MRPS28-201ENST00000276585 U2AF1Q01081 240 aaKnown RBP eCLIP16.39■□□□□ 0.21
MRPS28-201ENST00000276585 COL4A5P29400 1685 aa16.38■□□□□ 0.21
MRPS28-201ENST00000276585 GNAT3A8MTJ3 354 aa16.38■□□□□ 0.21
MRPS28-201ENST00000276585 IL6STP40189 918 aaPredicted RBP16.38■□□□□ 0.21
MRPS28-201ENST00000276585 KIF23Q02241 960 aaPredicted RBP16.38■□□□□ 0.21
MRPS28-201ENST00000276585 DDX10Q13206 875 aaKnown RBP16.38■□□□□ 0.21
MRPS28-201ENST00000276585 GPRC5DQ9NZD1 345 aa16.38■□□□□ 0.21
MRPS28-201ENST00000276585 NUDCQ9Y266 331 aa16.38■□□□□ 0.21
MRPS28-201ENST00000276585 KDM3BQ7LBC6 1761 aa16.37■□□□□ 0.21
MRPS28-201ENST00000276585 DLL1O00548 723 aa16.37■□□□□ 0.21
MRPS28-201ENST00000276585 RGMBQ6NW40 437 aa16.37■□□□□ 0.21
MRPS28-201ENST00000276585 NIM1KQ8IY84 436 aa16.37■□□□□ 0.21
MRPS28-201ENST00000276585 KLRG2A4D1S0 409 aaPredicted RBP16.36■□□□□ 0.21
MRPS28-201ENST00000276585 PKN2Q16513 984 aaKnown RBP16.36■□□□□ 0.21
MRPS28-201ENST00000276585 CDC37L1Q7L3B6 337 aa16.36■□□□□ 0.21
MRPS28-201ENST00000276585 DZIP3Q86Y13 1208 aaKnown RBP16.36■□□□□ 0.21
MRPS28-201ENST00000276585 HDAC9Q9UKV0 1011 aa16.36■□□□□ 0.21
MRPS28-201ENST00000276585 FAM177BA6PVY3 158 aa16.35■□□□□ 0.21
MRPS28-201ENST00000276585 FAM155AB1AL88 458 aaPredicted RBP16.35■□□□□ 0.21
MRPS28-201ENST00000276585 CCDC102AQ96A19 550 aa16.35■□□□□ 0.21
MRPS28-201ENST00000276585 LAMB4A4D0S4 1761 aa16.34■□□□□ 0.21
MRPS28-201ENST00000276585 CC2D2BQ6DHV5 1058 aa16.34■□□□□ 0.21
MRPS28-201ENST00000276585 TPTE2Q6XPS3 522 aa16.34■□□□□ 0.21
MRPS28-201ENST00000276585 TEX13AQ9BXU3 409 aaPredicted RBP16.34■□□□□ 0.21
MRPS28-201ENST00000276585 A1BGP04217 495 aa16.33■□□□□ 0.2
MRPS28-201ENST00000276585 ZNF157P51786 506 aaPredicted RBP16.33■□□□□ 0.2
MRPS28-201ENST00000276585 RALBP1Q15311 655 aa16.33■□□□□ 0.2
MRPS28-201ENST00000276585 USP48Q86UV5 1035 aa16.33■□□□□ 0.2
MRPS28-201ENST00000276585 ZC3H15Q8WU90 426 aaKnown RBP16.33■□□□□ 0.2
MRPS28-201ENST00000276585 PLEKHF1Q96S99 279 aa16.33■□□□□ 0.2
MRPS28-201ENST00000276585 PGAP2Q9UHJ9 254 aa16.33■□□□□ 0.2
MRPS28-201ENST00000276585 ZNF652Q9Y2D9 606 aa16.33■□□□□ 0.2
MRPS28-201ENST00000276585 SNED1Q8TER0 1413 aa16.33■□□□□ 0.2
MRPS28-201ENST00000276585 KCNQ3O43525 872 aa16.32■□□□□ 0.2
MRPS28-201ENST00000276585 GTF2E1P29083 439 aaPredicted RBP16.32■□□□□ 0.2
MRPS28-201ENST00000276585 GMPSP49915 693 aaPredicted RBP16.32■□□□□ 0.2
MRPS28-201ENST00000276585 TEFQ10587 303 aa16.32■□□□□ 0.2
MRPS28-201ENST00000276585 ZNF496Q96IT1 587 aaPredicted RBP16.32■□□□□ 0.2
MRPS28-201ENST00000276585 HEG1Q9ULI3 1381 aa16.32■□□□□ 0.2
MRPS28-201ENST00000276585 PPIP5K2O43314 1243 aa16.31■□□□□ 0.2
MRPS28-201ENST00000276585 ZNF790Q6PG37 636 aa16.31■□□□□ 0.2
MRPS28-201ENST00000276585 MCM10Q7L590 875 aa16.31■□□□□ 0.2
MRPS28-201ENST00000276585 C2orf69Q8N8R5 385 aa16.31■□□□□ 0.2
MRPS28-201ENST00000276585 BCL2L13Q9BXK5 485 aa16.31■□□□□ 0.2
MRPS28-201ENST00000276585 GBA2Q9HCG7 927 aaPredicted RBP16.31■□□□□ 0.2
MRPS28-201ENST00000276585 AKAP11Q9UKA4 1901 aa16.31■□□□□ 0.2
MRPS28-201ENST00000276585 DCTN1Q14203 1278 aa16.3■□□□□ 0.2
MRPS28-201ENST00000276585 CLEC4GQ6UXB4 293 aa16.3■□□□□ 0.2
MRPS28-201ENST00000276585 TRPM4Q8TD43 1214 aa16.3■□□□□ 0.2
MRPS28-201ENST00000276585 CSRNP1Q96S65 589 aa16.3■□□□□ 0.2
MRPS28-201ENST00000276585 NIP7Q9Y221 180 aaKnown RBP eCLIP16.3■□□□□ 0.2
MRPS28-201ENST00000276585 MYBBP1AQ9BQG0 1328 aaKnown RBP16.29■□□□□ 0.2
MRPS28-201ENST00000276585 TCERG1O14776 1098 aaKnown RBP16.29■□□□□ 0.2
MRPS28-201ENST00000276585 HIRAP54198 1017 aaPredicted RBP16.29■□□□□ 0.2
MRPS28-201ENST00000276585 AOC3Q16853 763 aa16.29■□□□□ 0.2
MRPS28-201ENST00000276585 GRIPAP1Q4V328 841 aa16.29■□□□□ 0.2
MRPS28-201ENST00000276585 DLK2Q6UY11 383 aa16.29■□□□□ 0.2
MRPS28-201ENST00000276585 CXCL9Q07325 125 aa16.28■□□□□ 0.2
MRPS28-201ENST00000276585 HTATSF1O43719 755 aaKnown RBP16.27■□□□□ 0.2
MRPS28-201ENST00000276585 SLC10A3P09131 477 aa16.27■□□□□ 0.2
MRPS28-201ENST00000276585 PIP4K2AP48426 406 aaPredicted RBP16.27■□□□□ 0.2
MRPS28-201ENST00000276585 FBXO46Q6PJ61 603 aaPredicted RBP16.27■□□□□ 0.2
MRPS28-201ENST00000276585 SLC17A8Q8NDX2 589 aa16.27■□□□□ 0.2
MRPS28-201ENST00000276585 ZNF296Q8WUU4 475 aaPredicted RBP16.27■□□□□ 0.2
MRPS28-201ENST00000276585 RPGRQ92834 1020 aaKnown RBP16.27■□□□□ 0.2
MRPS28-201ENST00000276585 CDHR2Q9BYE9 1310 aa16.26■□□□□ 0.19
MRPS28-201ENST00000276585 MKI67P46013 3256 aaKnown RBP16.26■□□□□ 0.19
MRPS28-201ENST00000276585 FMNL2Q96PY5 1086 aa16.26■□□□□ 0.19
MRPS28-201ENST00000276585 ZNRF3Q9ULT6 936 aa16.26■□□□□ 0.19
MRPS28-201ENST00000276585 PRAMEF22A3QJZ6 481 aa16.25■□□□□ 0.19
MRPS28-201ENST00000276585 BTBD11A6QL63 1104 aa16.25■□□□□ 0.19
MRPS28-201ENST00000276585 PPEF1O14829 653 aaPredicted RBP16.25■□□□□ 0.19
MRPS28-201ENST00000276585 NFE2L2Q16236 605 aa16.25■□□□□ 0.19
MRPS28-201ENST00000276585 KRT26Q7Z3Y9 468 aa16.25■□□□□ 0.19
MRPS28-201ENST00000276585 SLC51AQ86UW1 340 aa16.25■□□□□ 0.19
MRPS28-201ENST00000276585 REM2Q8IYK8 340 aaPredicted RBP16.25■□□□□ 0.19
MRPS28-201ENST00000276585 TMX4Q9H1E5 349 aaPredicted RBP16.25■□□□□ 0.19
MRPS28-201ENST00000276585 H7C1D1 291 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms