RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 UBAP1LF5GYI3 381 aa11.68□□□□□ -0.54
TRIM55-201ENST00000276573 KIF6Q6ZMV9 814 aa11.68□□□□□ -0.54
TRIM55-201ENST00000276573 MARCH10Q8NA82 808 aaPredicted RBP11.68□□□□□ -0.54
TRIM55-201ENST00000276573 CHMP5Q9NZZ3 219 aa11.68□□□□□ -0.54
TRIM55-201ENST00000276573 ZNF330Q9Y3S2 320 aaPredicted RBP11.68□□□□□ -0.54
TRIM55-201ENST00000276573 WNK3Q9BYP7 1800 aa11.68□□□□□ -0.54
TRIM55-201ENST00000276573 SLIT2O94813 1529 aa11.67□□□□□ -0.54
TRIM55-201ENST00000276573 FRAT2O75474 233 aaPredicted RBP11.67□□□□□ -0.54
TRIM55-201ENST00000276573 ANO2Q9NQ90 1003 aa11.67□□□□□ -0.54
TRIM55-201ENST00000276573 CCDC9Q9Y3X0 531 aaKnown RBP11.67□□□□□ -0.54
TRIM55-201ENST00000276573 MAP3K15Q6ZN16 1313 aa11.67□□□□□ -0.54
TRIM55-201ENST00000276573 SGSM2O43147 1006 aa11.67□□□□□ -0.54
TRIM55-201ENST00000276573 DDIT3P35638 169 aa11.67□□□□□ -0.54
TRIM55-201ENST00000276573 TFCP2Q12800 502 aa11.67□□□□□ -0.54
TRIM55-201ENST00000276573 EVI5LQ96CN4 794 aa11.67□□□□□ -0.54
TRIM55-201ENST00000276573 MCCP23508 829 aa11.66□□□□□ -0.54
TRIM55-201ENST00000276573 GIGYF2Q6Y7W6 1299 aaKnown RBP11.66□□□□□ -0.54
TRIM55-201ENST00000276573 AEBP2Q6ZN18 517 aaPredicted RBP11.66□□□□□ -0.54
TRIM55-201ENST00000276573 IL25Q9H293 177 aa11.66□□□□□ -0.54
TRIM55-201ENST00000276573 TLR7Q9NYK1 1049 aaKnown RBP11.66□□□□□ -0.54
TRIM55-201ENST00000276573 PCCAP05165 728 aaPredicted RBP11.65□□□□□ -0.54
TRIM55-201ENST00000276573 ANAPC15P60006 121 aa11.65□□□□□ -0.54
TRIM55-201ENST00000276573 TNNI3KQ59H18 835 aa11.65□□□□□ -0.54
TRIM55-201ENST00000276573 IL17RAQ96F46 866 aa11.65□□□□□ -0.54
TRIM55-201ENST00000276573 ACSBG1Q96GR2 724 aa11.65□□□□□ -0.54
TRIM55-201ENST00000276573 ARXQ96QS3 562 aa11.65□□□□□ -0.54
TRIM55-201ENST00000276573 CHMP3Q9Y3E7 222 aa11.65□□□□□ -0.54
TRIM55-201ENST00000276573 FPGT-TNNI3KV9GXZ4 949 aa11.65□□□□□ -0.54
TRIM55-201ENST00000276573 NWD2Q9ULI1 1742 aa11.65□□□□□ -0.54
TRIM55-201ENST00000276573 HLFQ16534 295 aa11.65□□□□□ -0.55
TRIM55-201ENST00000276573 ATG9AQ7Z3C6 839 aa11.65□□□□□ -0.55
TRIM55-201ENST00000276573 RUFY2Q8WXA3 655 aa11.65□□□□□ -0.55
TRIM55-201ENST00000276573 ZBTB1Q9Y2K1 713 aa11.65□□□□□ -0.55
TRIM55-201ENST00000276573 TJP1Q07157 1748 aa11.64□□□□□ -0.55
TRIM55-201ENST00000276573 ST18O60284 1047 aa11.64□□□□□ -0.55
TRIM55-201ENST00000276573 ATP5JP18859 108 aa11.64□□□□□ -0.55
TRIM55-201ENST00000276573 IL6STP40189 918 aaPredicted RBP11.64□□□□□ -0.55
TRIM55-201ENST00000276573 HSP90AB3PQ58FF7 597 aa11.64□□□□□ -0.55
TRIM55-201ENST00000276573 CWC27Q6UX04 472 aaKnown RBP11.64□□□□□ -0.55
TRIM55-201ENST00000276573 ZBTB38Q8NAP3 1195 aaPredicted RBP11.64□□□□□ -0.55
TRIM55-201ENST00000276573 BOLA2Q9H3K6 86 aa11.64□□□□□ -0.55
TRIM55-201ENST00000276573 PALD1Q9ULE6 856 aa11.64□□□□□ -0.55
TRIM55-201ENST00000276573 CIZ1Q9ULV3 898 aaPredicted RBP11.64□□□□□ -0.55
TRIM55-201ENST00000276573 AK9Q5TCS8 1911 aa11.64□□□□□ -0.55
TRIM55-201ENST00000276573 KAT6BQ8WYB5 2073 aa11.63□□□□□ -0.55
TRIM55-201ENST00000276573 ERVV-1B6SEH8 477 aa11.63□□□□□ -0.55
TRIM55-201ENST00000276573 HSPA4P34932 840 aa11.63□□□□□ -0.55
TRIM55-201ENST00000276573 NGLY1Q96IV0 654 aa11.63□□□□□ -0.55
TRIM55-201ENST00000276573 PLA2G12BQ9BX93 195 aa11.63□□□□□ -0.55
TRIM55-201ENST00000276573 LSG1Q9H089 658 aaKnown RBP11.63□□□□□ -0.55
TRIM55-201ENST00000276573 DIAPH3Q9NSV4 1193 aa11.63□□□□□ -0.55
TRIM55-201ENST00000276573 DOT1LQ8TEK3 1739 aa11.63□□□□□ -0.55
TRIM55-201ENST00000276573 EYA2O00167 538 aa11.63□□□□□ -0.55
TRIM55-201ENST00000276573 HSP90AA1P07900 732 aaKnown RBP11.63□□□□□ -0.55
TRIM55-201ENST00000276573 IL15P40933 162 aaPredicted RBP11.63□□□□□ -0.55
TRIM55-201ENST00000276573 VPS72Q15906 364 aa11.63□□□□□ -0.55
TRIM55-201ENST00000276573 KIAA1211Q6ZU35 1233 aa11.63□□□□□ -0.55
TRIM55-201ENST00000276573 NLRP10Q86W26 655 aa11.63□□□□□ -0.55
TRIM55-201ENST00000276573 FAM89AQ96GI7 184 aa11.63□□□□□ -0.55
TRIM55-201ENST00000276573 GPR108Q9NPR9 543 aa11.63□□□□□ -0.55
TRIM55-201ENST00000276573 DBNLQ9UJU6 430 aaKnown RBP11.63□□□□□ -0.55
TRIM55-201ENST00000276573 JCADQ9P266 1359 aa11.63□□□□□ -0.55
TRIM55-201ENST00000276573 A0A0G2JS52 829 aa11.62□□□□□ -0.55
TRIM55-201ENST00000276573 HIP1O00291 1037 aa11.62□□□□□ -0.55
TRIM55-201ENST00000276573 CIAO1O76071 339 aa11.62□□□□□ -0.55
TRIM55-201ENST00000276573 CSF1RP07333 972 aa11.62□□□□□ -0.55
TRIM55-201ENST00000276573 NEK4P51957 841 aa11.62□□□□□ -0.55
TRIM55-201ENST00000276573 INTS5Q6P9B9 1019 aaKnown RBP11.62□□□□□ -0.55
TRIM55-201ENST00000276573 ZNF594Q96JF6 807 aaPredicted RBP11.62□□□□□ -0.55
TRIM55-201ENST00000276573 C8orf37Q96NL8 207 aa11.62□□□□□ -0.55
TRIM55-201ENST00000276573 FOXD4L1Q9NU39 408 aa11.62□□□□□ -0.55
TRIM55-201ENST00000276573 ATP6V1AP38606 617 aa11.61□□□□□ -0.55
TRIM55-201ENST00000276573 EIF5P55010 431 aaKnown RBP11.61□□□□□ -0.55
TRIM55-201ENST00000276573 LRRC24Q50LG9 513 aa11.61□□□□□ -0.55
TRIM55-201ENST00000276573 DZIP3Q86Y13 1208 aaKnown RBP11.61□□□□□ -0.55
TRIM55-201ENST00000276573 IL27Q8NEV9 243 aa11.61□□□□□ -0.55
TRIM55-201ENST00000276573 DBNDD2Q9BQY9 259 aa11.61□□□□□ -0.55
TRIM55-201ENST00000276573 CCDC87Q9NVE4 849 aa11.61□□□□□ -0.55
TRIM55-201ENST00000276573 TBC1D2BQ9UPU7 963 aa11.61□□□□□ -0.55
TRIM55-201ENST00000276573 RAD50Q92878 1312 aa11.61□□□□□ -0.55
TRIM55-201ENST00000276573 CDHR2Q9BYE9 1310 aa11.61□□□□□ -0.55
TRIM55-201ENST00000276573 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.61□□□□□ -0.55
TRIM55-201ENST00000276573 LOC102724428A0A0B4J2F2 783 aa11.61□□□□□ -0.55
TRIM55-201ENST00000276573 GPTP24298 496 aa11.61□□□□□ -0.55
TRIM55-201ENST00000276573 SIK1P57059 783 aa11.61□□□□□ -0.55
TRIM55-201ENST00000276573 FAM98CQ17RN3 349 aaKnown RBP11.61□□□□□ -0.55
TRIM55-201ENST00000276573 CCDC57Q2TAC2 916 aa11.61□□□□□ -0.55
TRIM55-201ENST00000276573 FNBP4Q8N3X1 1017 aaPredicted RBP11.61□□□□□ -0.55
TRIM55-201ENST00000276573 SMARCC1Q92922 1105 aaPredicted RBP11.61□□□□□ -0.55
TRIM55-201ENST00000276573 FBXO3Q9UK99 471 aa11.61□□□□□ -0.55
TRIM55-201ENST00000276573 BCL9LQ86UU0 1499 aa11.61□□□□□ -0.55
TRIM55-201ENST00000276573 KCNQ2O43526 872 aa11.6□□□□□ -0.55
TRIM55-201ENST00000276573 MCM2P49736 904 aa11.6□□□□□ -0.55
TRIM55-201ENST00000276573 ZNF34Q8IZ26 560 aa11.6□□□□□ -0.55
TRIM55-201ENST00000276573 SYNE4Q8N205 404 aa11.6□□□□□ -0.55
TRIM55-201ENST00000276573 PUS3Q9BZE2 481 aaKnown RBP11.6□□□□□ -0.55
TRIM55-201ENST00000276573 DEKP35659 375 aaKnown RBP11.59□□□□□ -0.55
TRIM55-201ENST00000276573 CRKLP46109 303 aaKnown RBP11.59□□□□□ -0.55
TRIM55-201ENST00000276573 TIMM10P62072 90 aa11.59□□□□□ -0.55
TRIM55-201ENST00000276573 NMIQ13287 307 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms