RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 ESYT1Q9BSJ8 1104 aa18.66■□□□□ 0.58
SF3B4-201ENST00000271628 EPB41L2O43491 1005 aaKnown RBP18.65■□□□□ 0.58
SF3B4-201ENST00000271628 HSP90AB3PQ58FF7 597 aa18.65■□□□□ 0.58
SF3B4-201ENST00000271628 SIL1Q9H173 461 aa18.65■□□□□ 0.58
SF3B4-201ENST00000271628 MAP3K15Q6ZN16 1313 aa18.65■□□□□ 0.58
SF3B4-201ENST00000271628 AK9Q5TCS8 1911 aa18.65■□□□□ 0.58
SF3B4-201ENST00000271628 FOXO4P98177 505 aa18.65■□□□□ 0.58
SF3B4-201ENST00000271628 VPS72Q15906 364 aa18.65■□□□□ 0.58
SF3B4-201ENST00000271628 LMBR1LQ6UX01 489 aa18.65■□□□□ 0.58
SF3B4-201ENST00000271628 GIGYF2Q6Y7W6 1299 aaKnown RBP18.65■□□□□ 0.58
SF3B4-201ENST00000271628 SPATA31A6Q5VVP1 1343 aa18.65■□□□□ 0.58
SF3B4-201ENST00000271628 IL6STP40189 918 aaPredicted RBP18.64■□□□□ 0.57
SF3B4-201ENST00000271628 RABEP1Q15276 862 aa18.64■□□□□ 0.57
SF3B4-201ENST00000271628 C8orf37Q96NL8 207 aa18.64■□□□□ 0.57
SF3B4-201ENST00000271628 SLKQ9H2G2 1235 aaPredicted RBP18.64■□□□□ 0.57
SF3B4-201ENST00000271628 KLHDC4Q8TBB5 520 aa18.64■□□□□ 0.57
SF3B4-201ENST00000271628 EAF2Q96CJ1 260 aaPredicted RBP18.64■□□□□ 0.57
SF3B4-201ENST00000271628 TJP1Q07157 1748 aa18.63■□□□□ 0.57
SF3B4-201ENST00000271628 FNBP4Q8N3X1 1017 aaPredicted RBP18.63■□□□□ 0.57
SF3B4-201ENST00000271628 BCL9LQ86UU0 1499 aa18.62■□□□□ 0.57
SF3B4-201ENST00000271628 MCCP23508 829 aa18.62■□□□□ 0.57
SF3B4-201ENST00000271628 IL27Q8NEV9 243 aa18.62■□□□□ 0.57
SF3B4-201ENST00000271628 ARXQ96QS3 562 aa18.62■□□□□ 0.57
SF3B4-201ENST00000271628 ZBTB1Q9Y2K1 713 aa18.62■□□□□ 0.57
SF3B4-201ENST00000271628 ERVV-1B6SEH8 477 aa18.61■□□□□ 0.57
SF3B4-201ENST00000271628 PCCAP05165 728 aaPredicted RBP18.61■□□□□ 0.57
SF3B4-201ENST00000271628 SMARCC1Q92922 1105 aaPredicted RBP18.61■□□□□ 0.57
SF3B4-201ENST00000271628 ACSBG1Q96GR2 724 aa18.61■□□□□ 0.57
SF3B4-201ENST00000271628 CHMP3Q9Y3E7 222 aa18.61■□□□□ 0.57
SF3B4-201ENST00000271628 ZBTB38Q8NAP3 1195 aaPredicted RBP18.61■□□□□ 0.57
SF3B4-201ENST00000271628 EVI5LQ96CN4 794 aa18.61■□□□□ 0.57
SF3B4-201ENST00000271628 CCDC8Q9H0W5 538 aaPredicted RBP18.61■□□□□ 0.57
SF3B4-201ENST00000271628 A0A0G2JS52 829 aa18.6■□□□□ 0.57
SF3B4-201ENST00000271628 MAP4K4O95819 1239 aaPredicted RBP18.6■□□□□ 0.57
SF3B4-201ENST00000271628 FAM98CQ17RN3 349 aaKnown RBP18.6■□□□□ 0.57
SF3B4-201ENST00000271628 ATP6V1AP38606 617 aa18.59■□□□□ 0.57
SF3B4-201ENST00000271628 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.59■□□□□ 0.57
SF3B4-201ENST00000271628 ANO2Q9NQ90 1003 aa18.59■□□□□ 0.57
SF3B4-201ENST00000271628 LOC102724428A0A0B4J2F2 783 aa18.59■□□□□ 0.57
SF3B4-201ENST00000271628 SIK1P57059 783 aa18.59■□□□□ 0.57
SF3B4-201ENST00000271628 RUFY2Q8WXA3 655 aa18.59■□□□□ 0.57
SF3B4-201ENST00000271628 PLA2G12BQ9BX93 195 aa18.59■□□□□ 0.57
SF3B4-201ENST00000271628 K7ELQ4 463 aaPredicted RBP18.58■□□□□ 0.57
SF3B4-201ENST00000271628 ANAPC15P60006 121 aa18.58■□□□□ 0.57
SF3B4-201ENST00000271628 TNNI3KQ59H18 835 aa18.58■□□□□ 0.57
SF3B4-201ENST00000271628 DZIP3Q86Y13 1208 aaKnown RBP18.58■□□□□ 0.57
SF3B4-201ENST00000271628 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.58■□□□□ 0.57
SF3B4-201ENST00000271628 FPGT-TNNI3KV9GXZ4 949 aa18.58■□□□□ 0.57
SF3B4-201ENST00000271628 CICQ96RK0 1608 aaPredicted RBP18.58■□□□□ 0.56
SF3B4-201ENST00000271628 HIP1O00291 1037 aa18.58■□□□□ 0.56
SF3B4-201ENST00000271628 IL15P40933 162 aaPredicted RBP18.58■□□□□ 0.56
SF3B4-201ENST00000271628 TFCP2Q12800 502 aa18.58■□□□□ 0.56
SF3B4-201ENST00000271628 HLFQ16534 295 aa18.58■□□□□ 0.56
SF3B4-201ENST00000271628 CERKQ8TCT0 537 aa18.58■□□□□ 0.56
SF3B4-201ENST00000271628 FBXO3Q9UK99 471 aa18.58■□□□□ 0.56
SF3B4-201ENST00000271628 CDHR2Q9BYE9 1310 aa18.57■□□□□ 0.56
SF3B4-201ENST00000271628 SGSM2O43147 1006 aa18.57■□□□□ 0.56
SF3B4-201ENST00000271628 ST18O60284 1047 aa18.57■□□□□ 0.56
SF3B4-201ENST00000271628 EIF5P55010 431 aaKnown RBP18.57■□□□□ 0.56
SF3B4-201ENST00000271628 CCDC57Q2TAC2 916 aa18.57■□□□□ 0.56
SF3B4-201ENST00000271628 GPR108Q9NPR9 543 aa18.57■□□□□ 0.56
SF3B4-201ENST00000271628 CCDC87Q9NVE4 849 aa18.57■□□□□ 0.56
SF3B4-201ENST00000271628 USP21Q9UK80 565 aa18.57■□□□□ 0.56
SF3B4-201ENST00000271628 CIAO1O76071 339 aa18.56■□□□□ 0.56
SF3B4-201ENST00000271628 NLRP10Q86W26 655 aa18.56■□□□□ 0.56
SF3B4-201ENST00000271628 ANKRD36CQ5JPF3 1778 aa18.56■□□□□ 0.56
SF3B4-201ENST00000271628 PALLDQ8WX93 1383 aa18.56■□□□□ 0.56
SF3B4-201ENST00000271628 DIAPH3Q9NSV4 1193 aa18.56■□□□□ 0.56
SF3B4-201ENST00000271628 FAM89AQ96GI7 184 aa18.55■□□□□ 0.56
SF3B4-201ENST00000271628 TLR7Q9NYK1 1049 aaKnown RBP18.55■□□□□ 0.56
SF3B4-201ENST00000271628 CHMP5Q9NZZ3 219 aa18.55■□□□□ 0.56
SF3B4-201ENST00000271628 NUP98P52948 1817 aa18.55■□□□□ 0.56
SF3B4-201ENST00000271628 EYA2O00167 538 aa18.54■□□□□ 0.56
SF3B4-201ENST00000271628 CSF1RP07333 972 aa18.54■□□□□ 0.56
SF3B4-201ENST00000271628 ATP5JP18859 108 aa18.54■□□□□ 0.56
SF3B4-201ENST00000271628 CRKLP46109 303 aaKnown RBP18.54■□□□□ 0.56
SF3B4-201ENST00000271628 INTS5Q6P9B9 1019 aaKnown RBP18.54■□□□□ 0.56
SF3B4-201ENST00000271628 KIAA1211Q6ZU35 1233 aa18.54■□□□□ 0.56
SF3B4-201ENST00000271628 ATG9AQ7Z3C6 839 aa18.54■□□□□ 0.56
SF3B4-201ENST00000271628 SPRYD3Q8NCJ5 442 aa18.54■□□□□ 0.56
SF3B4-201ENST00000271628 IL17RAQ96F46 866 aa18.54■□□□□ 0.56
SF3B4-201ENST00000271628 BRPF3Q9ULD4 1205 aa18.54■□□□□ 0.56
SF3B4-201ENST00000271628 TBC1D2BQ9UPU7 963 aa18.54■□□□□ 0.56
SF3B4-201ENST00000271628 HSP90AA1P07900 732 aaKnown RBP18.53■□□□□ 0.56
SF3B4-201ENST00000271628 CWC27Q6UX04 472 aaKnown RBP18.53■□□□□ 0.56
SF3B4-201ENST00000271628 BOLA2Q9H3K6 86 aa18.53■□□□□ 0.56
SF3B4-201ENST00000271628 DBNLQ9UJU6 430 aaKnown RBP18.53■□□□□ 0.56
SF3B4-201ENST00000271628 ZNF831Q5JPB2 1677 aa18.53■□□□□ 0.56
SF3B4-201ENST00000271628 CD2BP2O95400 341 aaKnown RBP18.53■□□□□ 0.56
SF3B4-201ENST00000271628 GPTP24298 496 aa18.53■□□□□ 0.56
SF3B4-201ENST00000271628 RREB1Q92766 1687 aa18.52■□□□□ 0.56
SF3B4-201ENST00000271628 KCNQ2O43526 872 aa18.52■□□□□ 0.56
SF3B4-201ENST00000271628 ZNF34Q8IZ26 560 aa18.52■□□□□ 0.56
SF3B4-201ENST00000271628 TRMT112Q9UI30 125 aaKnown RBP18.52■□□□□ 0.56
SF3B4-201ENST00000271628 HSPA4P34932 840 aa18.51■□□□□ 0.55
SF3B4-201ENST00000271628 IFIT5Q13325 482 aaKnown RBP18.51■□□□□ 0.55
SF3B4-201ENST00000271628 RAD50Q92878 1312 aa18.51■□□□□ 0.55
SF3B4-201ENST00000271628 ITPK1Q13572 414 aa18.51■□□□□ 0.55
SF3B4-201ENST00000271628 AK7Q96M32 723 aa18.51■□□□□ 0.55
SF3B4-201ENST00000271628 IL25Q9H293 177 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms