RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 RTCBQ9Y3I0 505 aaKnown RBP11.26□□□□□ -0.61
SSR3-201ENST00000265044 GOLGA6L22H0YM25 854 aa11.25□□□□□ -0.61
SSR3-201ENST00000265044 HIP1O00291 1037 aa11.25□□□□□ -0.61
SSR3-201ENST00000265044 IFIT1P09914 478 aaKnown RBP11.25□□□□□ -0.61
SSR3-201ENST00000265044 IL15P40933 162 aaPredicted RBP11.25□□□□□ -0.61
SSR3-201ENST00000265044 RABEP1Q15276 862 aa11.25□□□□□ -0.61
SSR3-201ENST00000265044 UTP14AQ9BVJ6 771 aaKnown RBP11.25□□□□□ -0.61
SSR3-201ENST00000265044 AKAP2Q9Y2D5 859 aa11.25□□□□□ -0.61
SSR3-201ENST00000265044 APPP05067 770 aa11.25□□□□□ -0.61
SSR3-201ENST00000265044 HLFQ16534 295 aa11.25□□□□□ -0.61
SSR3-201ENST00000265044 TBC1D2Q9BYX2 928 aa11.25□□□□□ -0.61
SSR3-201ENST00000265044 STRCQ7RTU9 1775 aa11.25□□□□□ -0.61
SSR3-201ENST00000265044 RGS12O14924 1447 aa11.25□□□□□ -0.61
SSR3-201ENST00000265044 IL6STP40189 918 aaPredicted RBP11.25□□□□□ -0.61
SSR3-201ENST00000265044 FOXD4L5Q5VV16 416 aaPredicted RBP11.25□□□□□ -0.61
SSR3-201ENST00000265044 FOXD4L4Q8WXT5 416 aaPredicted RBP11.25□□□□□ -0.61
SSR3-201ENST00000265044 CYP19A1P11511 503 aaPredicted RBP11.24□□□□□ -0.61
SSR3-201ENST00000265044 DDX46Q7L014 1031 aaKnown RBP11.24□□□□□ -0.61
SSR3-201ENST00000265044 SEPT12Q8IYM1 358 aa11.24□□□□□ -0.61
SSR3-201ENST00000265044 HELBQ8NG08 1087 aaPredicted RBP11.24□□□□□ -0.61
SSR3-201ENST00000265044 EAF2Q96CJ1 260 aaPredicted RBP11.24□□□□□ -0.61
SSR3-201ENST00000265044 EVI5LQ96CN4 794 aa11.24□□□□□ -0.61
SSR3-201ENST00000265044 UPF3BQ9BZI7 483 aaKnown RBP11.24□□□□□ -0.61
SSR3-201ENST00000265044 RGPD2P0DJD1 1756 aa11.24□□□□□ -0.61
SSR3-201ENST00000265044 PALLDQ8WX93 1383 aa11.24□□□□□ -0.61
SSR3-201ENST00000265044 NCLP19338 710 aaKnown RBP11.24□□□□□ -0.61
SSR3-201ENST00000265044 VPS72Q15906 364 aa11.24□□□□□ -0.61
SSR3-201ENST00000265044 RNF20Q5VTR2 975 aa11.24□□□□□ -0.61
SSR3-201ENST00000265044 NBPF5PQ86XG9 351 aaPredicted RBP11.24□□□□□ -0.61
SSR3-201ENST00000265044 SETDB2Q96T68 719 aa11.24□□□□□ -0.61
SSR3-201ENST00000265044 GOLIM4O00461 696 aa11.24□□□□□ -0.61
SSR3-201ENST00000265044 POLA2Q14181 598 aa11.24□□□□□ -0.61
SSR3-201ENST00000265044 ATP10DQ9P241 1426 aa11.24□□□□□ -0.61
SSR3-201ENST00000265044 SH3TC1Q8TE82 1336 aa11.23□□□□□ -0.61
SSR3-201ENST00000265044 EYA2O00167 538 aa11.23□□□□□ -0.61
SSR3-201ENST00000265044 ITGA6P23229 1130 aa11.23□□□□□ -0.61
SSR3-201ENST00000265044 GJD4Q96KN9 370 aaPredicted RBP11.23□□□□□ -0.61
SSR3-201ENST00000265044 DBNDD2Q9BQY9 259 aa11.23□□□□□ -0.61
SSR3-201ENST00000265044 ESYT1Q9BSJ8 1104 aa11.23□□□□□ -0.61
SSR3-201ENST00000265044 NDUFB9Q9Y6M9 179 aa11.23□□□□□ -0.61
SSR3-201ENST00000265044 TTC41PQ6P2S7 1318 aa11.23□□□□□ -0.61
SSR3-201ENST00000265044 SYNE4Q8N205 404 aa11.23□□□□□ -0.61
SSR3-201ENST00000265044 CCDC24Q8N4L8 307 aa11.23□□□□□ -0.61
SSR3-201ENST00000265044 CHMLP26374 656 aa11.23□□□□□ -0.61
SSR3-201ENST00000265044 ZBTB38Q8NAP3 1195 aaPredicted RBP11.23□□□□□ -0.61
SSR3-201ENST00000265044 TMX4Q9H1E5 349 aaPredicted RBP11.23□□□□□ -0.61
SSR3-201ENST00000265044 RGPD5Q99666 1765 aa11.23□□□□□ -0.61
SSR3-201ENST00000265044 RGPD1P0DJD0 1748 aa11.23□□□□□ -0.61
SSR3-201ENST00000265044 SPATA31A6Q5VVP1 1343 aa11.22□□□□□ -0.61
SSR3-201ENST00000265044 TNNI3KQ59H18 835 aa11.22□□□□□ -0.61
SSR3-201ENST00000265044 FPGT-TNNI3KV9GXZ4 949 aa11.22□□□□□ -0.61
SSR3-201ENST00000265044 CCDC152Q4G0S7 254 aa11.22□□□□□ -0.61
SSR3-201ENST00000265044 TOMM22Q9NS69 142 aa11.22□□□□□ -0.61
SSR3-201ENST00000265044 IDH1O75874 414 aaKnown RBP11.22□□□□□ -0.61
SSR3-201ENST00000265044 PCCAP05165 728 aaPredicted RBP11.22□□□□□ -0.61
SSR3-201ENST00000265044 LRRC24Q50LG9 513 aa11.22□□□□□ -0.61
SSR3-201ENST00000265044 BARGINQ6ZT62 677 aa11.22□□□□□ -0.61
SSR3-201ENST00000265044 H7C1W4 665 aa11.21□□□□□ -0.61
SSR3-201ENST00000265044 PDE8AO60658 829 aa11.21□□□□□ -0.61
SSR3-201ENST00000265044 ATP2B3Q16720 1220 aa11.21□□□□□ -0.61
SSR3-201ENST00000265044 COPRSQ9NQ92 184 aa11.21□□□□□ -0.61
SSR3-201ENST00000265044 A0A1B0GUL7 405 aa11.21□□□□□ -0.61
SSR3-201ENST00000265044 SASH1O94885 1247 aa11.21□□□□□ -0.61
SSR3-201ENST00000265044 PTPN12Q05209 780 aaKnown RBP11.21□□□□□ -0.61
SSR3-201ENST00000265044 NLRP10Q86W26 655 aa11.21□□□□□ -0.61
SSR3-201ENST00000265044 CHMP5Q9NZZ3 219 aa11.21□□□□□ -0.61
SSR3-201ENST00000265044 TRPM3Q9HCF6 1732 aaPredicted RBP11.21□□□□□ -0.62
SSR3-201ENST00000265044 K7ELQ4 463 aaPredicted RBP11.21□□□□□ -0.62
SSR3-201ENST00000265044 MTX1Q13505 466 aa11.21□□□□□ -0.62
SSR3-201ENST00000265044 TRAPPC3LQ5T215 181 aa11.21□□□□□ -0.62
SSR3-201ENST00000265044 PRPF40BQ6NWY9 871 aaKnown RBP11.21□□□□□ -0.62
SSR3-201ENST00000265044 SMIM5Q71RC9 77 aa11.21□□□□□ -0.62
SSR3-201ENST00000265044 EDC3Q96F86 508 aaKnown RBP11.21□□□□□ -0.62
SSR3-201ENST00000265044 PUS3Q9BZE2 481 aaKnown RBP11.21□□□□□ -0.62
SSR3-201ENST00000265044 TRIM37O94972 964 aa11.2□□□□□ -0.62
SSR3-201ENST00000265044 FOXD4L6Q3SYB3 417 aaPredicted RBP11.2□□□□□ -0.62
SSR3-201ENST00000265044 PARP10Q53GL7 1025 aa11.2□□□□□ -0.62
SSR3-201ENST00000265044 FOXD4L3Q6VB84 417 aaPredicted RBP11.2□□□□□ -0.62
SSR3-201ENST00000265044 TLR7Q9NYK1 1049 aaKnown RBP11.2□□□□□ -0.62
SSR3-201ENST00000265044 G3V3G9 751 aa11.2□□□□□ -0.62
SSR3-201ENST00000265044 DCAF8Q5TAQ9 597 aa11.2□□□□□ -0.62
SSR3-201ENST00000265044 CDC5LQ99459 802 aaKnown RBP11.2□□□□□ -0.62
SSR3-201ENST00000265044 USP26Q9BXU7 913 aa11.2□□□□□ -0.62
SSR3-201ENST00000265044 NLRP3Q96P20 1036 aa11.2□□□□□ -0.62
SSR3-201ENST00000265044 OSBPL3Q9H4L5 887 aa11.2□□□□□ -0.62
SSR3-201ENST00000265044 ALS2Q96Q42 1657 aa11.2□□□□□ -0.62
SSR3-201ENST00000265044 ROBO1Q9Y6N7 1651 aa11.2□□□□□ -0.62
SSR3-201ENST00000265044 TPTE2Q6XPS3 522 aa11.19□□□□□ -0.62
SSR3-201ENST00000265044 GREM2Q9H772 168 aa11.19□□□□□ -0.62
SSR3-201ENST00000265044 ABCF2Q9UG63 623 aa11.19□□□□□ -0.62
SSR3-201ENST00000265044 NFKBIBQ15653 356 aa11.19□□□□□ -0.62
SSR3-201ENST00000265044 JAKMIP1Q96N16 626 aaKnown RBP11.19□□□□□ -0.62
SSR3-201ENST00000265044 GBP4Q96PP9 640 aa11.19□□□□□ -0.62
SSR3-201ENST00000265044 BCL11BQ9C0K0 894 aaPredicted RBP11.19□□□□□ -0.62
SSR3-201ENST00000265044 CTSWP56202 376 aa11.19□□□□□ -0.62
SSR3-201ENST00000265044 USPL1Q5W0Q7 1092 aa11.19□□□□□ -0.62
SSR3-201ENST00000265044 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.19□□□□□ -0.62
SSR3-201ENST00000265044 GZF1Q9H116 711 aaPredicted RBP11.19□□□□□ -0.62
SSR3-201ENST00000265044 STAP2Q9UGK3 403 aa11.19□□□□□ -0.62
SSR3-201ENST00000265044 IQSEC3Q9UPP2 1182 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms