RNA–Protein interactions for RNA: ENST00000263671.9

CHRDL2-201, Transcript of chordin like 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHRDL2, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-201ENST00000263671 NLRP10Q86W26 655 aa16.02■□□□□ 0.16
CHRDL2-201ENST00000263671 AMIGO3Q86WK7 504 aa16.02■□□□□ 0.16
CHRDL2-201ENST00000263671 UBN2Q6ZU65 1347 aa16.02■□□□□ 0.16
CHRDL2-201ENST00000263671 UBR3Q6ZT12 1888 aa16.02■□□□□ 0.15
CHRDL2-201ENST00000263671 SMARCA5O60264 1052 aaPredicted RBP16.02■□□□□ 0.15
CHRDL2-201ENST00000263671 TSHZ2Q9NRE2 1034 aa16.02■□□□□ 0.15
CHRDL2-201ENST00000263671 RABL6Q3YEC7 729 aaPredicted RBP16.01■□□□□ 0.15
CHRDL2-201ENST00000263671 ZNF34Q8IZ26 560 aa16.01■□□□□ 0.15
CHRDL2-201ENST00000263671 PCCAP05165 728 aaPredicted RBP16■□□□□ 0.15
CHRDL2-201ENST00000263671 FOXO4P98177 505 aa16■□□□□ 0.15
CHRDL2-201ENST00000263671 SLC27A3Q5K4L6 730 aa16■□□□□ 0.15
CHRDL2-201ENST00000263671 SURF6O75683 361 aaKnown RBP15.99■□□□□ 0.15
CHRDL2-201ENST00000263671 ZBTB38Q8NAP3 1195 aaPredicted RBP15.99■□□□□ 0.15
CHRDL2-201ENST00000263671 FAM89AQ96GI7 184 aa15.99■□□□□ 0.15
CHRDL2-201ENST00000263671 BCL11AQ9H165 835 aa15.99■□□□□ 0.15
CHRDL2-201ENST00000263671 RTCBQ9Y3I0 505 aaKnown RBP15.99■□□□□ 0.15
CHRDL2-201ENST00000263671 RGPD3A6NKT7 1758 aaPredicted RBP15.99■□□□□ 0.15
CHRDL2-201ENST00000263671 RGPD4Q7Z3J3 1758 aa15.99■□□□□ 0.15
CHRDL2-201ENST00000263671 TXNRD1Q16881 649 aa15.99■□□□□ 0.15
CHRDL2-201ENST00000263671 PROM2Q8N271 834 aa15.99■□□□□ 0.15
CHRDL2-201ENST00000263671 AK7Q96M32 723 aa15.99■□□□□ 0.15
CHRDL2-201ENST00000263671 LRRCC1Q9C099 1032 aa15.99■□□□□ 0.15
CHRDL2-201ENST00000263671 PA2G4Q9UQ80 394 aaKnown RBP15.99■□□□□ 0.15
CHRDL2-201ENST00000263671 MYH3P11055 1940 aa15.98■□□□□ 0.15
CHRDL2-201ENST00000263671 APBA3O96018 575 aa15.98■□□□□ 0.15
CHRDL2-201ENST00000263671 LMBR1LQ6UX01 489 aa15.98■□□□□ 0.15
CHRDL2-201ENST00000263671 C16orf71Q8IYS4 520 aaPredicted RBP15.98■□□□□ 0.15
CHRDL2-201ENST00000263671 SYNE4Q8N205 404 aa15.98■□□□□ 0.15
CHRDL2-201ENST00000263671 ZBTB47Q9UFB7 747 aaPredicted RBP15.98■□□□□ 0.15
CHRDL2-201ENST00000263671 ZNF652Q9Y2D9 606 aa15.98■□□□□ 0.15
CHRDL2-201ENST00000263671 NOP58Q9Y2X3 529 aaKnown RBP15.98■□□□□ 0.15
CHRDL2-201ENST00000263671 LAMB2P55268 1798 aa15.98■□□□□ 0.15
CHRDL2-201ENST00000263671 PHF14O94880 888 aa15.97■□□□□ 0.15
CHRDL2-201ENST00000263671 OTUD7AQ8TE49 926 aaPredicted RBP15.97■□□□□ 0.15
CHRDL2-201ENST00000263671 BCL2L12Q9HB09 334 aa15.97■□□□□ 0.15
CHRDL2-201ENST00000263671 SRP68Q9UHB9 627 aaKnown RBP15.97■□□□□ 0.15
CHRDL2-201ENST00000263671 COL24A1Q17RW2 1714 aa15.97■□□□□ 0.15
CHRDL2-201ENST00000263671 DDX60Q8IY21 1712 aaKnown RBP15.97■□□□□ 0.15
CHRDL2-201ENST00000263671 CDHR2Q9BYE9 1310 aa15.97■□□□□ 0.15
CHRDL2-201ENST00000263671 PLSCR1O15162 318 aa15.97■□□□□ 0.15
CHRDL2-201ENST00000263671 RFX5P48382 616 aaPredicted RBP15.97■□□□□ 0.15
CHRDL2-201ENST00000263671 SUSD4Q5VX71 490 aa15.97■□□□□ 0.15
CHRDL2-201ENST00000263671 KLHDC4Q8TBB5 520 aa15.97■□□□□ 0.15
CHRDL2-201ENST00000263671 ARHGEF1Q92888 912 aaKnown RBP15.97■□□□□ 0.15
CHRDL2-201ENST00000263671 NARFQ9UHQ1 456 aa15.97■□□□□ 0.15
CHRDL2-201ENST00000263671 TRMT112Q9UI30 125 aaKnown RBP15.97■□□□□ 0.15
CHRDL2-201ENST00000263671 NIP7Q9Y221 180 aaKnown RBP eCLIP15.97■□□□□ 0.15
CHRDL2-201ENST00000263671 RAB11FIP3O75154 756 aa15.96■□□□□ 0.15
CHRDL2-201ENST00000263671 USPL1Q5W0Q7 1092 aa15.96■□□□□ 0.15
CHRDL2-201ENST00000263671 CLEC4GQ6UXB4 293 aa15.96■□□□□ 0.15
CHRDL2-201ENST00000263671 TUBGCP6Q96RT7 1819 aa15.95■□□□□ 0.14
CHRDL2-201ENST00000263671 RGL2O15211 777 aa15.95■□□□□ 0.14
CHRDL2-201ENST00000263671 HSP90AB4PQ58FF6 505 aa15.95■□□□□ 0.14
CHRDL2-201ENST00000263671 PLEKHM2Q8IWE5 1019 aa15.95■□□□□ 0.14
CHRDL2-201ENST00000263671 RHPN1Q8TCX5 695 aa15.95■□□□□ 0.14
CHRDL2-201ENST00000263671 PLA2G12BQ9BX93 195 aa15.95■□□□□ 0.14
CHRDL2-201ENST00000263671 CHMP3Q9Y3E7 222 aa15.95■□□□□ 0.14
CHRDL2-201ENST00000263671 USP42Q9H9J4 1324 aaKnown RBP15.95■□□□□ 0.14
CHRDL2-201ENST00000263671 FAM177BA6PVY3 158 aa15.94■□□□□ 0.14
CHRDL2-201ENST00000263671 OS9Q13438 667 aaPredicted RBP15.94■□□□□ 0.14
CHRDL2-201ENST00000263671 PARP10Q53GL7 1025 aa15.94■□□□□ 0.14
CHRDL2-201ENST00000263671 KIF1BPQ96EK5 621 aa15.94■□□□□ 0.14
CHRDL2-201ENST00000263671 SIL1Q9H173 461 aa15.94■□□□□ 0.14
CHRDL2-201ENST00000263671 IL1RAPL2Q9NP60 686 aa15.94■□□□□ 0.14
CHRDL2-201ENST00000263671 CASZ1Q86V15 1759 aa15.94■□□□□ 0.14
CHRDL2-201ENST00000263671 IRS4O14654 1257 aaPredicted RBP15.94■□□□□ 0.14
CHRDL2-201ENST00000263671 ZPR1O75312 459 aa15.94■□□□□ 0.14
CHRDL2-201ENST00000263671 NTSR2O95665 410 aa15.94■□□□□ 0.14
CHRDL2-201ENST00000263671 PTPN12Q05209 780 aaKnown RBP15.94■□□□□ 0.14
CHRDL2-201ENST00000263671 C8orf34Q49A92 452 aa15.94■□□□□ 0.14
CHRDL2-201ENST00000263671 TBC1D9BQ66K14 1250 aa15.94■□□□□ 0.14
CHRDL2-201ENST00000263671 UTP14AQ9BVJ6 771 aaKnown RBP15.94■□□□□ 0.14
CHRDL2-201ENST00000263671 COPRSQ9NQ92 184 aa15.94■□□□□ 0.14
CHRDL2-201ENST00000263671 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.93■□□□□ 0.14
CHRDL2-201ENST00000263671 FAM161AQ3B820 660 aa15.93■□□□□ 0.14
CHRDL2-201ENST00000263671 TRAPPC3LQ5T215 181 aa15.93■□□□□ 0.14
CHRDL2-201ENST00000263671 BACH2Q9BYV9 841 aa15.93■□□□□ 0.14
CHRDL2-201ENST00000263671 SH3TC1Q8TE82 1336 aa15.92■□□□□ 0.14
CHRDL2-201ENST00000263671 SALL3Q9BXA9 1300 aa15.92■□□□□ 0.14
CHRDL2-201ENST00000263671 ADRA2BP18089 450 aa15.92■□□□□ 0.14
CHRDL2-201ENST00000263671 RFC4P35249 363 aa15.92■□□□□ 0.14
CHRDL2-201ENST00000263671 CTSWP56202 376 aa15.92■□□□□ 0.14
CHRDL2-201ENST00000263671 BICDL1Q6ZP65 573 aa15.92■□□□□ 0.14
CHRDL2-201ENST00000263671 SASH1O94885 1247 aa15.91■□□□□ 0.14
CHRDL2-201ENST00000263671 CSF1RP07333 972 aa15.91■□□□□ 0.14
CHRDL2-201ENST00000263671 SSFA2P28290 1259 aa15.91■□□□□ 0.14
CHRDL2-201ENST00000263671 G3BP1Q13283 466 aaKnown RBP eCLIP15.91■□□□□ 0.14
CHRDL2-201ENST00000263671 ERC1Q8IUD2 1116 aa15.91■□□□□ 0.14
CHRDL2-201ENST00000263671 CCDC85AQ96PX6 553 aaPredicted RBP15.91■□□□□ 0.14
CHRDL2-201ENST00000263671 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.91■□□□□ 0.14
CHRDL2-201ENST00000263671 PDE8AO60658 829 aa15.91■□□□□ 0.14
CHRDL2-201ENST00000263671 ZNF827Q17R98 1081 aa15.91■□□□□ 0.14
CHRDL2-201ENST00000263671 NUTM1Q86Y26 1132 aa15.91■□□□□ 0.14
CHRDL2-201ENST00000263671 TTLL11Q8NHH1 800 aa15.9■□□□□ 0.14
CHRDL2-201ENST00000263671 HCLS1P14317 486 aaPredicted RBP15.89■□□□□ 0.13
CHRDL2-201ENST00000263671 GSPT1P15170 499 aaKnown RBP15.89■□□□□ 0.13
CHRDL2-201ENST00000263671 PDE1AP54750 535 aa15.89■□□□□ 0.13
CHRDL2-201ENST00000263671 BMP2KLQ5H9B9 411 aa15.89■□□□□ 0.13
CHRDL2-201ENST00000263671 ILDR1Q86SU0 546 aaPredicted RBP15.89■□□□□ 0.13
CHRDL2-201ENST00000263671 AKT1S1Q96B36 256 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms