RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 TRIM28Q13263 835 aaKnown RBP19.37■□□□□ 0.69
VPS26A-201ENST00000263559 HLFQ16534 295 aa19.37■□□□□ 0.69
VPS26A-201ENST00000263559 GIGYF2Q6Y7W6 1299 aaKnown RBP19.37■□□□□ 0.69
VPS26A-201ENST00000263559 USP42Q9H9J4 1324 aaKnown RBP19.37■□□□□ 0.69
VPS26A-201ENST00000263559 LOC102724428A0A0B4J2F2 783 aa19.37■□□□□ 0.69
VPS26A-201ENST00000263559 SIK1P57059 783 aa19.37■□□□□ 0.69
VPS26A-201ENST00000263559 MYT1Q01538 1121 aa19.37■□□□□ 0.69
VPS26A-201ENST00000263559 IL6STP40189 918 aaPredicted RBP19.36■□□□□ 0.69
VPS26A-201ENST00000263559 IFIT2P09913 472 aaKnown RBP19.36■□□□□ 0.69
VPS26A-201ENST00000263559 AACSQ86V21 672 aa19.36■□□□□ 0.69
VPS26A-201ENST00000263559 EAF2Q96CJ1 260 aaPredicted RBP19.36■□□□□ 0.69
VPS26A-201ENST00000263559 AK9Q5TCS8 1911 aa19.36■□□□□ 0.69
VPS26A-201ENST00000263559 TTC41PQ6P2S7 1318 aa19.36■□□□□ 0.69
VPS26A-201ENST00000263559 MAP4K4O95819 1239 aaPredicted RBP19.35■□□□□ 0.69
VPS26A-201ENST00000263559 MEX3CQ5U5Q3 659 aaKnown RBP19.35■□□□□ 0.69
VPS26A-201ENST00000263559 TBC1D2Q9BYX2 928 aa19.35■□□□□ 0.69
VPS26A-201ENST00000263559 PALLDQ8WX93 1383 aa19.35■□□□□ 0.69
VPS26A-201ENST00000263559 INTS5Q6P9B9 1019 aaKnown RBP19.35■□□□□ 0.69
VPS26A-201ENST00000263559 KIF2CQ99661 725 aa19.35■□□□□ 0.69
VPS26A-201ENST00000263559 USP26Q9BXU7 913 aa19.35■□□□□ 0.69
VPS26A-201ENST00000263559 CHMP3Q9Y3E7 222 aa19.35■□□□□ 0.69
VPS26A-201ENST00000263559 NUP98P52948 1817 aa19.34■□□□□ 0.69
VPS26A-201ENST00000263559 ITPK1Q13572 414 aa19.34■□□□□ 0.69
VPS26A-201ENST00000263559 TBC1D2BQ9UPU7 963 aa19.34■□□□□ 0.69
VPS26A-201ENST00000263559 ERC2O15083 957 aa19.33■□□□□ 0.69
VPS26A-201ENST00000263559 CHMLP26374 656 aa19.33■□□□□ 0.69
VPS26A-201ENST00000263559 CRKLP46109 303 aaKnown RBP19.33■□□□□ 0.69
VPS26A-201ENST00000263559 DZIP3Q86Y13 1208 aaKnown RBP19.33■□□□□ 0.69
VPS26A-201ENST00000263559 SMARCC1Q92922 1105 aaPredicted RBP19.33■□□□□ 0.69
VPS26A-201ENST00000263559 CCDC8Q9H0W5 538 aaPredicted RBP19.33■□□□□ 0.69
VPS26A-201ENST00000263559 ECHDC1Q9NTX5 307 aa19.33■□□□□ 0.69
VPS26A-201ENST00000263559 CCDC87Q9NVE4 849 aa19.33■□□□□ 0.69
VPS26A-201ENST00000263559 ANKRD36CQ5JPF3 1778 aa19.33■□□□□ 0.68
VPS26A-201ENST00000263559 MYH14Q7Z406 1995 aaKnown RBP19.32■□□□□ 0.68
VPS26A-201ENST00000263559 GLRX3O76003 335 aaKnown RBP19.32■□□□□ 0.68
VPS26A-201ENST00000263559 GPTP24298 496 aa19.32■□□□□ 0.68
VPS26A-201ENST00000263559 EIF5P55010 431 aaKnown RBP19.32■□□□□ 0.68
VPS26A-201ENST00000263559 FAM89AQ96GI7 184 aa19.32■□□□□ 0.68
VPS26A-201ENST00000263559 PCCAP05165 728 aaPredicted RBP19.32■□□□□ 0.68
VPS26A-201ENST00000263559 HSP90AB3PQ58FF7 597 aa19.32■□□□□ 0.68
VPS26A-201ENST00000263559 THSD7AQ9UPZ6 1657 aa19.32■□□□□ 0.68
VPS26A-201ENST00000263559 CICQ96RK0 1608 aaPredicted RBP19.32■□□□□ 0.68
VPS26A-201ENST00000263559 ERVV-1B6SEH8 477 aa19.31■□□□□ 0.68
VPS26A-201ENST00000263559 GPATCH3Q96I76 525 aa19.31■□□□□ 0.68
VPS26A-201ENST00000263559 REC8O95072 547 aa19.31■□□□□ 0.68
VPS26A-201ENST00000263559 NLRP10Q86W26 655 aa19.31■□□□□ 0.68
VPS26A-201ENST00000263559 ZBTB38Q8NAP3 1195 aaPredicted RBP19.31■□□□□ 0.68
VPS26A-201ENST00000263559 ESYT1Q9BSJ8 1104 aa19.31■□□□□ 0.68
VPS26A-201ENST00000263559 TLR7Q9NYK1 1049 aaKnown RBP19.31■□□□□ 0.68
VPS26A-201ENST00000263559 TFCP2Q12800 502 aa19.3■□□□□ 0.68
VPS26A-201ENST00000263559 AFF2P51816 1311 aa19.3■□□□□ 0.68
VPS26A-201ENST00000263559 PTF1AQ7RTS3 328 aa19.3■□□□□ 0.68
VPS26A-201ENST00000263559 CNTROBQ8N137 903 aa19.3■□□□□ 0.68
VPS26A-201ENST00000263559 GJD4Q96KN9 370 aaPredicted RBP19.3■□□□□ 0.68
VPS26A-201ENST00000263559 RREB1Q92766 1687 aa19.29■□□□□ 0.68
VPS26A-201ENST00000263559 SYNE4Q8N205 404 aa19.29■□□□□ 0.68
VPS26A-201ENST00000263559 FAM182BQ5T319 152 aa19.28■□□□□ 0.68
VPS26A-201ENST00000263559 PLA2G12BQ9BX93 195 aa19.28■□□□□ 0.68
VPS26A-201ENST00000263559 COL5A3P25940 1745 aaPredicted RBP19.28■□□□□ 0.68
VPS26A-201ENST00000263559 TNNI3KQ59H18 835 aa19.28■□□□□ 0.68
VPS26A-201ENST00000263559 ATG9AQ7Z3C6 839 aa19.28■□□□□ 0.68
VPS26A-201ENST00000263559 ZNF594Q96JF6 807 aaPredicted RBP19.28■□□□□ 0.68
VPS26A-201ENST00000263559 FPGT-TNNI3KV9GXZ4 949 aa19.28■□□□□ 0.68
VPS26A-201ENST00000263559 ZNF34Q8IZ26 560 aa19.27■□□□□ 0.67
VPS26A-201ENST00000263559 CDHR2Q9BYE9 1310 aa19.26■□□□□ 0.67
VPS26A-201ENST00000263559 ZNF831Q5JPB2 1677 aa19.26■□□□□ 0.67
VPS26A-201ENST00000263559 SNX21Q969T3 373 aa19.26■□□□□ 0.67
VPS26A-201ENST00000263559 IL25Q9H293 177 aa19.26■□□□□ 0.67
VPS26A-201ENST00000263559 UBN2Q6ZU65 1347 aa19.25■□□□□ 0.67
VPS26A-201ENST00000263559 CSF1RP07333 972 aa19.25■□□□□ 0.67
VPS26A-201ENST00000263559 CCDC85AQ96PX6 553 aaPredicted RBP19.25■□□□□ 0.67
VPS26A-201ENST00000263559 TRMT112Q9UI30 125 aaKnown RBP19.25■□□□□ 0.67
VPS26A-201ENST00000263559 DBNLQ9UJU6 430 aaKnown RBP19.25■□□□□ 0.67
VPS26A-201ENST00000263559 BTAF1O14981 1849 aa19.25■□□□□ 0.67
VPS26A-201ENST00000263559 KCNQ4P56696 695 aa19.25■□□□□ 0.67
VPS26A-201ENST00000263559 CCDC57Q2TAC2 916 aa19.25■□□□□ 0.67
VPS26A-201ENST00000263559 LRRC24Q50LG9 513 aa19.25■□□□□ 0.67
VPS26A-201ENST00000263559 HSCBQ8IWL3 235 aa19.25■□□□□ 0.67
VPS26A-201ENST00000263559 EYA2O00167 538 aa19.24■□□□□ 0.67
VPS26A-201ENST00000263559 IL15P40933 162 aaPredicted RBP19.24■□□□□ 0.67
VPS26A-201ENST00000263559 LINC00116Q8NCU8 138 aa19.24■□□□□ 0.67
VPS26A-201ENST00000263559 ATRNO75882 1429 aa19.24■□□□□ 0.67
VPS26A-201ENST00000263559 CAMTA2O94983 1202 aa19.24■□□□□ 0.67
VPS26A-201ENST00000263559 PUS3Q9BZE2 481 aaKnown RBP19.24■□□□□ 0.67
VPS26A-201ENST00000263559 BOLA2Q9H3K6 86 aa19.24■□□□□ 0.67
VPS26A-201ENST00000263559 EVI5LQ96CN4 794 aa19.23■□□□□ 0.67
VPS26A-201ENST00000263559 ANO2Q9NQ90 1003 aa19.23■□□□□ 0.67
VPS26A-201ENST00000263559 TRPC5Q9UL62 973 aaPredicted RBP19.23■□□□□ 0.67
VPS26A-201ENST00000263559 MYH3P11055 1940 aa19.23■□□□□ 0.67
VPS26A-201ENST00000263559 NHSQ6T4R5 1651 aa19.23■□□□□ 0.67
VPS26A-201ENST00000263559 ONECUT3O60422 494 aaPredicted RBP19.23■□□□□ 0.67
VPS26A-201ENST00000263559 IRS4O14654 1257 aaPredicted RBP19.22■□□□□ 0.67
VPS26A-201ENST00000263559 CIAO1O76071 339 aa19.22■□□□□ 0.67
VPS26A-201ENST00000263559 CD2BP2O95400 341 aaKnown RBP19.22■□□□□ 0.67
VPS26A-201ENST00000263559 SPRYD3Q8NCJ5 442 aa19.22■□□□□ 0.67
VPS26A-201ENST00000263559 SLKQ9H2G2 1235 aaPredicted RBP19.22■□□□□ 0.67
VPS26A-201ENST00000263559 NBR1Q14596 966 aa19.22■□□□□ 0.67
VPS26A-201ENST00000263559 TTLL11Q8NHH1 800 aa19.22■□□□□ 0.67
VPS26A-201ENST00000263559 DBNDD2Q9BQY9 259 aa19.22■□□□□ 0.67
VPS26A-201ENST00000263559 SGSM2O43147 1006 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms