RNA–Protein interactions for RNA: ENST00000262965.9

TCF3-201, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-201ENST00000262965 ASXL1Q8IXJ9 1541 aa15.74■□□□□ 0.11
TCF3-201ENST00000262965 IFIT3O14879 490 aaKnown RBP15.74■□□□□ 0.11
TCF3-201ENST00000262965 WASF1Q92558 559 aa15.74■□□□□ 0.11
TCF3-201ENST00000262965 KDM2BQ8NHM5 1336 aa15.73■□□□□ 0.11
TCF3-201ENST00000262965 F13A1P00488 732 aa15.73■□□□□ 0.11
TCF3-201ENST00000262965 HMGB1P09429 215 aaKnown RBP15.73■□□□□ 0.11
TCF3-201ENST00000262965 USP5P45974 858 aa15.73■□□□□ 0.11
TCF3-201ENST00000262965 POLKQ9UBT6 870 aa15.73■□□□□ 0.11
TCF3-201ENST00000262965 RANBP6O60518 1105 aaKnown RBP15.73■□□□□ 0.11
TCF3-201ENST00000262965 GPTP24298 496 aa15.73■□□□□ 0.11
TCF3-201ENST00000262965 SYCP1Q15431 976 aa15.73■□□□□ 0.11
TCF3-201ENST00000262965 CEP85Q6P2H3 762 aa15.73■□□□□ 0.11
TCF3-201ENST00000262965 CHPF2Q9P2E5 772 aa15.73■□□□□ 0.11
TCF3-201ENST00000262965 NEFHP12036 1026 aa15.72■□□□□ 0.11
TCF3-201ENST00000262965 MYO6Q9UM54 1294 aa15.72■□□□□ 0.11
TCF3-201ENST00000262965 GOLGA8AA7E2F4 631 aa15.72■□□□□ 0.11
TCF3-201ENST00000262965 PTGS1P23219 599 aa15.72■□□□□ 0.11
TCF3-201ENST00000262965 GSDMDP57764 484 aa15.72■□□□□ 0.11
TCF3-201ENST00000262965 DNAI1Q9UI46 699 aa15.72■□□□□ 0.11
TCF3-201ENST00000262965 AMOTL2Q9Y2J4 779 aa15.72■□□□□ 0.11
TCF3-201ENST00000262965 SLC12A7Q9Y666 1083 aa15.72■□□□□ 0.11
TCF3-201ENST00000262965 NEMFO60524 1076 aa15.72■□□□□ 0.11
TCF3-201ENST00000262965 AK2P54819 239 aa15.72■□□□□ 0.11
TCF3-201ENST00000262965 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.72■□□□□ 0.11
TCF3-201ENST00000262965 NUP88Q99567 741 aaPredicted RBP15.72■□□□□ 0.11
TCF3-201ENST00000262965 NSD2O96028 1365 aa15.71■□□□□ 0.11
TCF3-201ENST00000262965 TNRQ92752 1358 aa15.71■□□□□ 0.11
TCF3-201ENST00000262965 IFIT5Q13325 482 aaKnown RBP15.71■□□□□ 0.11
TCF3-201ENST00000262965 CCDC148Q8NFR7 591 aa15.71■□□□□ 0.11
TCF3-201ENST00000262965 ACEP12821 1306 aa15.71■□□□□ 0.11
TCF3-201ENST00000262965 C17orf53Q8N3J3 647 aaPredicted RBP15.71■□□□□ 0.11
TCF3-201ENST00000262965 USP26Q9BXU7 913 aa15.71■□□□□ 0.11
TCF3-201ENST00000262965 FAM173BQ6P4H8 233 aa15.71■□□□□ 0.11
TCF3-201ENST00000262965 POLR3AO14802 1390 aaPredicted RBP15.71■□□□□ 0.1
TCF3-201ENST00000262965 ANKRD36BQ8N2N9 1353 aa15.71■□□□□ 0.1
TCF3-201ENST00000262965 LMOD1P29536 600 aaPredicted RBP15.7■□□□□ 0.1
TCF3-201ENST00000262965 KCNH5Q8NCM2 988 aa15.7■□□□□ 0.1
TCF3-201ENST00000262965 CEP131Q9UPN4 1083 aa15.7■□□□□ 0.1
TCF3-201ENST00000262965 AKAP2Q9Y2D5 859 aa15.7■□□□□ 0.1
TCF3-201ENST00000262965 UHRF1BP1LA0JNW5 1464 aa15.7■□□□□ 0.1
TCF3-201ENST00000262965 IARSP41252 1262 aaKnown RBP15.7■□□□□ 0.1
TCF3-201ENST00000262965 CHST3Q7LGC8 479 aa15.7■□□□□ 0.1
TCF3-201ENST00000262965 AOPEPQ8N6M6 819 aa15.7■□□□□ 0.1
TCF3-201ENST00000262965 HYPKQ9NX55 129 aa15.7■□□□□ 0.1
TCF3-201ENST00000262965 ERLIN2O94905 339 aa15.7■□□□□ 0.1
TCF3-201ENST00000262965 LIG1P18858 919 aa15.7■□□□□ 0.1
TCF3-201ENST00000262965 LMAN1P49257 510 aa15.7■□□□□ 0.1
TCF3-201ENST00000262965 TYRO3Q06418 890 aa15.7■□□□□ 0.1
TCF3-201ENST00000262965 LUZP1Q86V48 1076 aa15.7■□□□□ 0.1
TCF3-201ENST00000262965 CCDC12Q8WUD4 166 aaPredicted RBP15.7■□□□□ 0.1
TCF3-201ENST00000262965 BMP2KQ9NSY1 1161 aaPredicted RBP15.7■□□□□ 0.1
TCF3-201ENST00000262965 ANAPC15P60006 121 aa15.7■□□□□ 0.1
TCF3-201ENST00000262965 ATP8B2P98198 1209 aa15.7■□□□□ 0.1
TCF3-201ENST00000262965 MARCKSP29966 332 aaPredicted RBP15.69■□□□□ 0.1
TCF3-201ENST00000262965 PIK3R4Q99570 1358 aa15.69■□□□□ 0.1
TCF3-201ENST00000262965 GBP3Q9H0R5 595 aa15.69■□□□□ 0.1
TCF3-201ENST00000262965 RNF123Q5XPI4 1314 aa15.69■□□□□ 0.1
TCF3-201ENST00000262965 KLF18A0A0U1RQI7 1052 aa15.69■□□□□ 0.1
TCF3-201ENST00000262965 PHF8Q9UPP1 1060 aa15.69■□□□□ 0.1
TCF3-201ENST00000262965 ZBTB7BO15156 539 aaPredicted RBP15.69■□□□□ 0.1
TCF3-201ENST00000262965 SPA17Q15506 151 aa15.69■□□□□ 0.1
TCF3-201ENST00000262965 CALCOCO1Q9P1Z2 691 aa15.69■□□□□ 0.1
TCF3-201ENST00000262965 ATP7AQ04656 1500 aa15.69■□□□□ 0.1
TCF3-201ENST00000262965 SYT1P21579 422 aa15.68■□□□□ 0.1
TCF3-201ENST00000262965 IGHMBP2P38935 993 aaKnown RBP15.68■□□□□ 0.1
TCF3-201ENST00000262965 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.68■□□□□ 0.14e-7■■■■□ 19.9
TCF3-201ENST00000262965 UBASH3AP57075 661 aa15.68■□□□□ 0.1
TCF3-201ENST00000262965 SLC39A6Q13433 755 aa15.68■□□□□ 0.1
TCF3-201ENST00000262965 AMOTQ4VCS5 1084 aa15.68■□□□□ 0.1
TCF3-201ENST00000262965 CCDC102BQ68D86 513 aa15.68■□□□□ 0.1
TCF3-201ENST00000262965 IQCEQ6IPM2 695 aa15.68■□□□□ 0.1
TCF3-201ENST00000262965 TAF4BQ92750 862 aa15.68■□□□□ 0.1
TCF3-201ENST00000262965 PAXBP1Q9Y5B6 917 aa15.68■□□□□ 0.1
TCF3-201ENST00000262965 CCDC196A0A1B0GTZ2 297 aa15.67■□□□□ 0.1
TCF3-201ENST00000262965 EIF4A2Q14240 407 aaKnown RBP15.67■□□□□ 0.1
TCF3-201ENST00000262965 BMS1Q14692 1282 aaKnown RBP15.67■□□□□ 0.1
TCF3-201ENST00000262965 LDHAL6AQ6ZMR3 332 aa15.67■□□□□ 0.1
TCF3-201ENST00000262965 CTCFLQ8NI51 663 aaPredicted RBP15.67■□□□□ 0.1
TCF3-201ENST00000262965 SLC26A6Q9BXS9 759 aa15.67■□□□□ 0.1
TCF3-201ENST00000262965 SYKP43405 635 aa15.67■□□□□ 0.1
TCF3-201ENST00000262965 MCM6Q14566 821 aa15.67■□□□□ 0.1
TCF3-201ENST00000262965 TMEM67Q5HYA8 995 aa15.67■□□□□ 0.1
TCF3-201ENST00000262965 Q6ZUG5 572 aa15.67■□□□□ 0.1
TCF3-201ENST00000262965 CHMLP26374 656 aa15.67■□□□□ 0.1
TCF3-201ENST00000262965 MATR3P43243 847 aaKnown RBP eCLIP15.67■□□□□ 0.1
TCF3-201ENST00000262965 CACNA2D4Q7Z3S7 1137 aa15.67■□□□□ 0.1
TCF3-201ENST00000262965 KRT222Q8N1A0 295 aa15.67■□□□□ 0.1
TCF3-201ENST00000262965 MAP3K12Q12852 859 aa15.66■□□□□ 0.1
TCF3-201ENST00000262965 SLC4A8Q2Y0W8 1093 aa15.66■□□□□ 0.1
TCF3-201ENST00000262965 TDRD12Q587J7 1177 aaKnown RBP15.66■□□□□ 0.1
TCF3-201ENST00000262965 TRMT112Q9UI30 125 aaKnown RBP15.66■□□□□ 0.1
TCF3-201ENST00000262965 CHD1O14646 1710 aa15.66■□□□□ 0.1
TCF3-201ENST00000262965 SSRP1Q08945 709 aaKnown RBP15.66■□□□□ 0.1
TCF3-201ENST00000262965 G2E3Q7L622 706 aa15.66■□□□□ 0.1
TCF3-201ENST00000262965 ZSCAN16Q9H4T2 348 aaPredicted RBP15.66■□□□□ 0.1
TCF3-201ENST00000262965 RBM25P49756 843 aaKnown RBP15.66■□□□□ 0.1
TCF3-201ENST00000262965 METAP2P50579 478 aaKnown RBP eCLIP15.66■□□□□ 0.12e-7■■■■□ 21.1
TCF3-201ENST00000262965 NCKAP5LQ9HCH0 1330 aa15.66■□□□□ 0.1
TCF3-201ENST00000262965 ARHGEF12Q9NZN5 1544 aa15.66■□□□□ 0.1
TCF3-201ENST00000262965 STARD3NLO95772 234 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms