RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 SLC4A8Q2Y0W8 1093 aa11.84□□□□□ -0.51
PALB2-201ENST00000261584 NAT10Q9H0A0 1025 aaKnown RBP11.84□□□□□ -0.51
PALB2-201ENST00000261584 TPM3P06753 285 aa11.83□□□□□ -0.51
PALB2-201ENST00000261584 INTS4Q96HW7 963 aaKnown RBP11.83□□□□□ -0.51
PALB2-201ENST00000261584 NPATQ14207 1427 aa11.83□□□□□ -0.52
PALB2-201ENST00000261584 YTHDC2Q9H6S0 1430 aaKnown RBP11.83□□□□□ -0.52
PALB2-201ENST00000261584 TTC37Q6PGP7 1564 aa11.83□□□□□ -0.52
PALB2-201ENST00000261584 A0A0D9SFI3 127 aa11.83□□□□□ -0.52
PALB2-201ENST00000261584 TIMM10P62072 90 aa11.83□□□□□ -0.52
PALB2-201ENST00000261584 NUP133Q8WUM0 1156 aa11.83□□□□□ -0.52
PALB2-201ENST00000261584 SH2B1Q9NRF2 756 aaPredicted RBP11.83□□□□□ -0.52
PALB2-201ENST00000261584 CFAP45Q9UL16 551 aa11.83□□□□□ -0.52
PALB2-201ENST00000261584 ZNF215Q9UL58 517 aaPredicted RBP11.83□□□□□ -0.52
PALB2-201ENST00000261584 PHACTR2O75167 634 aa11.83□□□□□ -0.52
PALB2-201ENST00000261584 TRIM29Q14134 588 aa11.83□□□□□ -0.52
PALB2-201ENST00000261584 UVSSAQ2YD98 709 aa11.83□□□□□ -0.52
PALB2-201ENST00000261584 IL17REQ8NFR9 667 aa11.83□□□□□ -0.52
PALB2-201ENST00000261584 BICC1Q9H694 974 aaKnown RBP11.83□□□□□ -0.52
PALB2-201ENST00000261584 IFNKQ9P0W0 207 aa11.83□□□□□ -0.52
PALB2-201ENST00000261584 A0A087WZG4 1122 aa11.83□□□□□ -0.52
PALB2-201ENST00000261584 IDH1O75874 414 aaKnown RBP11.83□□□□□ -0.52
PALB2-201ENST00000261584 ANAPC15P60006 121 aa11.83□□□□□ -0.52
PALB2-201ENST00000261584 SNW1Q13573 536 aaKnown RBP11.83□□□□□ -0.52
PALB2-201ENST00000261584 PROSER3Q2NL68 480 aa11.83□□□□□ -0.52
PALB2-201ENST00000261584 EVI5LQ96CN4 794 aa11.82□□□□□ -0.52
PALB2-201ENST00000261584 PCMTD1Q96MG8 357 aaPredicted RBP11.82□□□□□ -0.52
PALB2-201ENST00000261584 GJB4Q9NTQ9 266 aa11.82□□□□□ -0.52
PALB2-201ENST00000261584 RAD50Q92878 1312 aa11.82□□□□□ -0.52
PALB2-201ENST00000261584 COPS6Q7L5N1 327 aa11.82□□□□□ -0.52
PALB2-201ENST00000261584 MICU3Q86XE3 530 aa11.82□□□□□ -0.52
PALB2-201ENST00000261584 HDAC5Q9UQL6 1122 aa11.82□□□□□ -0.52
PALB2-201ENST00000261584 ANKRD1Q15327 319 aa11.81□□□□□ -0.52
PALB2-201ENST00000261584 PLEKHO1Q53GL0 409 aaPredicted RBP11.81□□□□□ -0.52
PALB2-201ENST00000261584 CACTINQ8WUQ7 758 aaKnown RBP11.81□□□□□ -0.52
PALB2-201ENST00000261584 LEO1Q8WVC0 666 aaPredicted RBP11.81□□□□□ -0.52
PALB2-201ENST00000261584 PDLIM2Q96JY6 352 aa11.81□□□□□ -0.52
PALB2-201ENST00000261584 HINFPQ9BQA5 517 aa11.81□□□□□ -0.52
PALB2-201ENST00000261584 SRRTQ9BXP5 876 aaKnown RBP11.81□□□□□ -0.52
PALB2-201ENST00000261584 ST7Q9NRC1 585 aa11.81□□□□□ -0.52
PALB2-201ENST00000261584 TAF6LQ9Y6J9 622 aa11.81□□□□□ -0.52
PALB2-201ENST00000261584 KDM5AP29375 1690 aaKnown RBP11.81□□□□□ -0.52
PALB2-201ENST00000261584 SLC27A2O14975 620 aa11.81□□□□□ -0.52
PALB2-201ENST00000261584 KARSQ15046 597 aaKnown RBP11.81□□□□□ -0.52
PALB2-201ENST00000261584 SMAP1Q8IYB5 467 aaPredicted RBP11.81□□□□□ -0.52
PALB2-201ENST00000261584 CCDC171Q6TFL3 1326 aa11.81□□□□□ -0.52
PALB2-201ENST00000261584 ERCC6LQ2NKX8 1250 aa11.81□□□□□ -0.52
PALB2-201ENST00000261584 XAGE3Q8WTP9 111 aa11.81□□□□□ -0.52
PALB2-201ENST00000261584 ZNF396Q96N95 335 aaPredicted RBP11.81□□□□□ -0.52
PALB2-201ENST00000261584 DDX19AQ9NUU7 478 aaKnown RBP11.81□□□□□ -0.52
PALB2-201ENST00000261584 CROCC2H7BZ55 1655 aa11.81□□□□□ -0.52
PALB2-201ENST00000261584 SBNO2Q9Y2G9 1366 aa11.81□□□□□ -0.52
PALB2-201ENST00000261584 GOLGA8BA8MQT2 603 aa11.8□□□□□ -0.52
PALB2-201ENST00000261584 ZNF853P0CG23 659 aa11.8□□□□□ -0.52
PALB2-201ENST00000261584 ARHGAP29Q52LW3 1261 aa11.8□□□□□ -0.52
PALB2-201ENST00000261584 FKBP15Q5T1M5 1219 aa11.8□□□□□ -0.52
PALB2-201ENST00000261584 OLFM4Q6UX06 510 aa11.8□□□□□ -0.52
PALB2-201ENST00000261584 ERC1Q8IUD2 1116 aa11.8□□□□□ -0.52
PALB2-201ENST00000261584 EAF2Q96CJ1 260 aaPredicted RBP11.8□□□□□ -0.52
PALB2-201ENST00000261584 C8orf76Q96K31 380 aa11.8□□□□□ -0.52
PALB2-201ENST00000261584 RABEP2Q9H5N1 569 aa11.8□□□□□ -0.52
PALB2-201ENST00000261584 ABCC1P33527 1531 aa11.8□□□□□ -0.52
PALB2-201ENST00000261584 DNA2P51530 1060 aa11.8□□□□□ -0.52
PALB2-201ENST00000261584 CHRNA2Q15822 529 aa11.8□□□□□ -0.52
PALB2-201ENST00000261584 ZSCAN25Q6NSZ9 544 aa11.8□□□□□ -0.52
PALB2-201ENST00000261584 ARGLU1Q9NWB6 273 aaPredicted RBP11.8□□□□□ -0.52
PALB2-201ENST00000261584 HYPKQ9NX55 129 aa11.8□□□□□ -0.52
PALB2-201ENST00000261584 CDC42BPAQ5VT25 1732 aa11.8□□□□□ -0.52
PALB2-201ENST00000261584 CYP2E1P05181 493 aaPredicted RBP11.8□□□□□ -0.52
PALB2-201ENST00000261584 ZNF75DP51815 510 aa11.8□□□□□ -0.52
PALB2-201ENST00000261584 TFCP2Q12800 502 aa11.8□□□□□ -0.52
PALB2-201ENST00000261584 USP27XA6NNY8 438 aa11.79□□□□□ -0.52
PALB2-201ENST00000261584 MCM6Q14566 821 aa11.79□□□□□ -0.52
PALB2-201ENST00000261584 ZNF589Q86UQ0 364 aaPredicted RBP11.79□□□□□ -0.52
PALB2-201ENST00000261584 DBNDD2Q9BQY9 259 aa11.79□□□□□ -0.52
PALB2-201ENST00000261584 DBF4Q9UBU7 674 aaPredicted RBP11.79□□□□□ -0.52
PALB2-201ENST00000261584 SLC3A2P08195 630 aaKnown RBP11.79□□□□□ -0.52
PALB2-201ENST00000261584 GNG11P61952 73 aa11.79□□□□□ -0.52
PALB2-201ENST00000261584 TMCO3Q6UWJ1 677 aa11.79□□□□□ -0.52
PALB2-201ENST00000261584 ANO10Q9NW15 660 aa11.79□□□□□ -0.52
PALB2-201ENST00000261584 ERCC6L2Q5T890 1561 aa11.79□□□□□ -0.52
PALB2-201ENST00000261584 ASXL2Q76L83 1435 aa11.79□□□□□ -0.52
PALB2-201ENST00000261584 ZNF594Q96JF6 807 aaPredicted RBP11.79□□□□□ -0.52
PALB2-201ENST00000261584 EPC1Q9H2F5 836 aa11.79□□□□□ -0.52
PALB2-201ENST00000261584 ORC3Q9UBD5 711 aaPredicted RBP11.79□□□□□ -0.52
PALB2-201ENST00000261584 MRVI1Q9Y6F6 885 aa11.79□□□□□ -0.52
PALB2-201ENST00000261584 KAT6BQ8WYB5 2073 aa11.79□□□□□ -0.52
PALB2-201ENST00000261584 PTPDC1A2A3K4 754 aa11.78□□□□□ -0.52
PALB2-201ENST00000261584 GPTP24298 496 aa11.78□□□□□ -0.52
PALB2-201ENST00000261584 KIAA1524Q8TCG1 905 aa11.78□□□□□ -0.52
PALB2-201ENST00000261584 CCDC102AQ96A19 550 aa11.78□□□□□ -0.52
PALB2-201ENST00000261584 SUCLG2Q96I99 432 aa11.78□□□□□ -0.52
PALB2-201ENST00000261584 GPHNQ9NQX3 736 aaPredicted RBP11.78□□□□□ -0.52
PALB2-201ENST00000261584 AP5Z1O43299 807 aa11.78□□□□□ -0.52
PALB2-201ENST00000261584 STX17P56962 302 aa11.78□□□□□ -0.52
PALB2-201ENST00000261584 COL9A3Q14050 684 aaPredicted RBP11.78□□□□□ -0.52
PALB2-201ENST00000261584 CPLX2Q6PUV4 134 aaKnown RBP11.78□□□□□ -0.52
PALB2-201ENST00000261584 C11orf57Q6ZUT1 292 aaPredicted RBP11.78□□□□□ -0.52
PALB2-201ENST00000261584 UTP14AQ9BVJ6 771 aaKnown RBP11.78□□□□□ -0.52
PALB2-201ENST00000261584 LSG1Q9H089 658 aaKnown RBP11.78□□□□□ -0.52
PALB2-201ENST00000261584 IFIT1P09914 478 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms