RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 MPHOSPH8Q99549 860 aa14.24□□□□□ -0.13
LIN28A-201ENST00000254231 FSD1Q9BTV5 496 aa14.24□□□□□ -0.13
LIN28A-201ENST00000254231 METTL24Q5JXM2 366 aa14.24□□□□□ -0.13
LIN28A-201ENST00000254231 CASC1Q6TDU7 716 aa14.24□□□□□ -0.13
LIN28A-201ENST00000254231 GPR101Q96P66 508 aaPredicted RBP14.24□□□□□ -0.13
LIN28A-201ENST00000254231 IPO9Q96P70 1041 aaKnown RBP14.24□□□□□ -0.13
LIN28A-201ENST00000254231 IFIT5Q13325 482 aaKnown RBP14.23□□□□□ -0.13
LIN28A-201ENST00000254231 PI16Q6UXB8 463 aa14.23□□□□□ -0.13
LIN28A-201ENST00000254231 KRT27Q7Z3Y8 459 aa14.23□□□□□ -0.13
LIN28A-201ENST00000254231 NWD1Q149M9 1564 aa14.23□□□□□ -0.13
LIN28A-201ENST00000254231 GREM2Q9H772 168 aa14.23□□□□□ -0.13
LIN28A-201ENST00000254231 NBPF5PQ86XG9 351 aaPredicted RBP14.23□□□□□ -0.13
LIN28A-201ENST00000254231 DBNDD2Q9BQY9 259 aa14.23□□□□□ -0.13
LIN28A-201ENST00000254231 EAF2Q96CJ1 260 aaPredicted RBP14.22□□□□□ -0.13
LIN28A-201ENST00000254231 DIAPH3Q9NSV4 1193 aa14.22□□□□□ -0.13
LIN28A-201ENST00000254231 EN1Q05925 392 aaPredicted RBP14.22□□□□□ -0.13
LIN28A-201ENST00000254231 AMIGO3Q86WK7 504 aa14.22□□□□□ -0.13
LIN28A-201ENST00000254231 KIF1BPQ96EK5 621 aa14.22□□□□□ -0.13
LIN28A-201ENST00000254231 KAZALD1Q96I82 304 aa14.22□□□□□ -0.13
LIN28A-201ENST00000254231 OVOS2A0A0G2JMS6 1433 aa14.21□□□□□ -0.13
LIN28A-201ENST00000254231 LINC00116Q8NCU8 138 aa14.21□□□□□ -0.13
LIN28A-201ENST00000254231 RTN4Q9NQC3 1192 aaKnown RBP14.21□□□□□ -0.13
LIN28A-201ENST00000254231 TOMM22Q9NS69 142 aa14.21□□□□□ -0.13
LIN28A-201ENST00000254231 RTCBQ9Y3I0 505 aaKnown RBP14.21□□□□□ -0.13
LIN28A-201ENST00000254231 TCIRG1Q13488 830 aa14.21□□□□□ -0.13
LIN28A-201ENST00000254231 WASHC4Q2M389 1173 aa14.21□□□□□ -0.13
LIN28A-201ENST00000254231 CEP126Q9P2H0 1117 aa14.21□□□□□ -0.13
LIN28A-201ENST00000254231 ABCF2Q9UG63 623 aa14.21□□□□□ -0.13
LIN28A-201ENST00000254231 GOLIM4O00461 696 aa14.21□□□□□ -0.14
LIN28A-201ENST00000254231 CHAF1AQ13111 956 aaPredicted RBP14.21□□□□□ -0.14
LIN28A-201ENST00000254231 CPA1P15085 419 aa14.2□□□□□ -0.14
LIN28A-201ENST00000254231 VPS72Q15906 364 aa14.2□□□□□ -0.14
LIN28A-201ENST00000254231 SUSD4Q5VX71 490 aa14.2□□□□□ -0.14
LIN28A-201ENST00000254231 KIAA1211Q6ZU35 1233 aa14.2□□□□□ -0.14
LIN28A-201ENST00000254231 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.2□□□□□ -0.14
LIN28A-201ENST00000254231 APPP05067 770 aa14.2□□□□□ -0.14
LIN28A-201ENST00000254231 ITGA6P23229 1130 aa14.2□□□□□ -0.14
LIN28A-201ENST00000254231 NCBP3Q53F19 620 aaKnown RBP14.2□□□□□ -0.14
LIN28A-201ENST00000254231 VPS37DQ86XT2 251 aa14.2□□□□□ -0.14
LIN28A-201ENST00000254231 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.2□□□□□ -0.14
LIN28A-201ENST00000254231 HOXB7P09629 217 aa14.2□□□□□ -0.14
LIN28A-201ENST00000254231 ALDH1L1O75891 902 aa14.19□□□□□ -0.14
LIN28A-201ENST00000254231 FGD1P98174 961 aa14.19□□□□□ -0.14
LIN28A-201ENST00000254231 SETDB2Q96T68 719 aa14.19□□□□□ -0.14
LIN28A-201ENST00000254231 BABAM1Q9NWV8 329 aa14.19□□□□□ -0.14
LIN28A-201ENST00000254231 IDH1O75874 414 aaKnown RBP14.18□□□□□ -0.14
LIN28A-201ENST00000254231 RXRBP28702 533 aa14.18□□□□□ -0.14
LIN28A-201ENST00000254231 CCDC129Q6ZRS4 1044 aa14.18□□□□□ -0.14
LIN28A-201ENST00000254231 CDC45O75419 566 aa14.18□□□□□ -0.14
LIN28A-201ENST00000254231 SASH1O94885 1247 aa14.18□□□□□ -0.14
LIN28A-201ENST00000254231 TTC22Q5TAA0 569 aa14.18□□□□□ -0.14
LIN28A-201ENST00000254231 RAB11FIP4Q86YS3 637 aa14.18□□□□□ -0.14
LIN28A-201ENST00000254231 TEX13AQ9BXU3 409 aaPredicted RBP14.18□□□□□ -0.14
LIN28A-201ENST00000254231 PSDA5PKW4 1024 aaPredicted RBP14.17□□□□□ -0.14
LIN28A-201ENST00000254231 ADORA1P30542 326 aa14.17□□□□□ -0.14
LIN28A-201ENST00000254231 DEKP35659 375 aaKnown RBP14.17□□□□□ -0.14
LIN28A-201ENST00000254231 SEC62Q99442 399 aaKnown RBP14.17□□□□□ -0.14
LIN28A-201ENST00000254231 TRAPPC3LQ5T215 181 aa14.17□□□□□ -0.14
LIN28A-201ENST00000254231 PDGFDQ9GZP0 370 aaPredicted RBP14.17□□□□□ -0.14
LIN28A-201ENST00000254231 BRPF1P55201 1214 aaPredicted RBP14.17□□□□□ -0.14
LIN28A-201ENST00000254231 SF3B2Q13435 895 aaKnown RBP14.17□□□□□ -0.14
LIN28A-201ENST00000254231 ERFEQ4G0M1 354 aa14.17□□□□□ -0.14
LIN28A-201ENST00000254231 NLRP10Q86W26 655 aa14.17□□□□□ -0.14
LIN28A-201ENST00000254231 GPATCH3Q96I76 525 aa14.17□□□□□ -0.14
LIN28A-201ENST00000254231 RGS12O14924 1447 aa14.17□□□□□ -0.14
LIN28A-201ENST00000254231 GIGYF2Q6Y7W6 1299 aaKnown RBP14.16□□□□□ -0.14
LIN28A-201ENST00000254231 ZNF622Q969S3 477 aaKnown RBP eCLIP14.16□□□□□ -0.14
LIN28A-201ENST00000254231 SLIT3O75094 1523 aa14.16□□□□□ -0.14
LIN28A-201ENST00000254231 TBC1D9BQ66K14 1250 aa14.16□□□□□ -0.14
LIN28A-201ENST00000254231 SSH3Q8TE77 659 aa14.16□□□□□ -0.14
LIN28A-201ENST00000254231 ARHGEF1Q92888 912 aaKnown RBP14.16□□□□□ -0.14
LIN28A-201ENST00000254231 FAM227BQ96M60 508 aa14.16□□□□□ -0.14
LIN28A-201ENST00000254231 LRRC4BQ9NT99 713 aa14.16□□□□□ -0.14
LIN28A-201ENST00000254231 ISY1Q9ULR0 285 aaKnown RBP14.16□□□□□ -0.14
LIN28A-201ENST00000254231 MAP3K15Q6ZN16 1313 aa14.16□□□□□ -0.14
LIN28A-201ENST00000254231 F8W031 263 aaPredicted RBP14.16□□□□□ -0.14
LIN28A-201ENST00000254231 CDCA7Q9BWT1 371 aaPredicted RBP14.16□□□□□ -0.14
LIN28A-201ENST00000254231 GZF1Q9H116 711 aaPredicted RBP14.16□□□□□ -0.14
LIN28A-201ENST00000254231 SAMD1Q6SPF0 538 aaPredicted RBP14.15□□□□□ -0.14
LIN28A-201ENST00000254231 OLFM4Q6UX06 510 aa14.15□□□□□ -0.14
LIN28A-201ENST00000254231 UTP14AQ9BVJ6 771 aaKnown RBP14.15□□□□□ -0.14
LIN28A-201ENST00000254231 RIMBP2O15034 1052 aa14.15□□□□□ -0.14
LIN28A-201ENST00000254231 NKX1-1Q15270 411 aaPredicted RBP14.15□□□□□ -0.14
LIN28A-201ENST00000254231 TTC39AQ5SRH9 613 aa14.15□□□□□ -0.14
LIN28A-201ENST00000254231 INTS5Q6P9B9 1019 aaKnown RBP14.15□□□□□ -0.14
LIN28A-201ENST00000254231 ANKRD18BA2A2Z9 1011 aa14.14□□□□□ -0.15
LIN28A-201ENST00000254231 G3V3G9 751 aa14.14□□□□□ -0.15
LIN28A-201ENST00000254231 NEK4P51957 841 aa14.14□□□□□ -0.15
LIN28A-201ENST00000254231 PTPN12Q05209 780 aaKnown RBP14.14□□□□□ -0.15
LIN28A-201ENST00000254231 DCAF8Q5TAQ9 597 aa14.14□□□□□ -0.15
LIN28A-201ENST00000254231 SMARCC1Q92922 1105 aaPredicted RBP14.14□□□□□ -0.15
LIN28A-201ENST00000254231 HDAC5Q9UQL6 1122 aa14.14□□□□□ -0.15
LIN28A-201ENST00000254231 XIRP1Q702N8 1843 aaKnown RBP14.14□□□□□ -0.15
LIN28A-201ENST00000254231 A0A1B0GUL7 405 aa14.14□□□□□ -0.15
LIN28A-201ENST00000254231 ANTXR1Q9H6X2 564 aa14.14□□□□□ -0.15
LIN28A-201ENST00000254231 ANKIB1Q9P2G1 1089 aa14.14□□□□□ -0.15
LIN28A-201ENST00000254231 ATF5Q9Y2D1 282 aaPredicted RBP14.14□□□□□ -0.15
LIN28A-201ENST00000254231 HAND2P61296 217 aa14.14□□□□□ -0.15
LIN28A-201ENST00000254231 HSP90AB4PQ58FF6 505 aa14.14□□□□□ -0.15
LIN28A-201ENST00000254231 POTEAQ6S8J7 498 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms