RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 GTF2E1P29083 439 aaPredicted RBP16.22■□□□□ 0.19
RFPL3-201ENST00000249007 PIP4K2AP48426 406 aaPredicted RBP16.22■□□□□ 0.19
RFPL3-201ENST00000249007 NIM1KQ8IY84 436 aa16.22■□□□□ 0.19
RFPL3-201ENST00000249007 PANK3Q9H999 370 aa16.22■□□□□ 0.19
RFPL3-201ENST00000249007 MKI67P46013 3256 aaKnown RBP16.22■□□□□ 0.19
RFPL3-201ENST00000249007 ZEB1P37275 1124 aaPredicted RBP16.22■□□□□ 0.19
RFPL3-201ENST00000249007 GRIPAP1Q4V328 841 aa16.22■□□□□ 0.19
RFPL3-201ENST00000249007 SAGE1Q9NXZ1 904 aa16.22■□□□□ 0.19
RFPL3-201ENST00000249007 HUNKP57058 714 aa16.21■□□□□ 0.19
RFPL3-201ENST00000249007 CRY2Q49AN0 593 aa16.21■□□□□ 0.19
RFPL3-201ENST00000249007 GCC1Q96CN9 775 aa16.21■□□□□ 0.19
RFPL3-201ENST00000249007 NBPF15Q8N660 670 aa16.2■□□□□ 0.18
RFPL3-201ENST00000249007 IL17REQ8NFR9 667 aa16.2■□□□□ 0.18
RFPL3-201ENST00000249007 PGAP2Q9UHJ9 254 aa16.2■□□□□ 0.18
RFPL3-201ENST00000249007 CDC37L1Q7L3B6 337 aa16.19■□□□□ 0.18
RFPL3-201ENST00000249007 ZC3H15Q8WU90 426 aaKnown RBP16.19■□□□□ 0.18
RFPL3-201ENST00000249007 SIPA1L3O60292 1781 aaPredicted RBP16.19■□□□□ 0.18
RFPL3-201ENST00000249007 RGL2O15211 777 aa16.18■□□□□ 0.18
RFPL3-201ENST00000249007 PPIP5K2O43314 1243 aa16.18■□□□□ 0.18
RFPL3-201ENST00000249007 TRPA1O75762 1119 aa16.18■□□□□ 0.18
RFPL3-201ENST00000249007 GMPSP49915 693 aaPredicted RBP16.18■□□□□ 0.18
RFPL3-201ENST00000249007 CTU1Q7Z7A3 348 aaKnown RBP16.18■□□□□ 0.18
RFPL3-201ENST00000249007 RPGRQ92834 1020 aaKnown RBP16.18■□□□□ 0.18
RFPL3-201ENST00000249007 USP16Q9Y5T5 823 aa16.18■□□□□ 0.18
RFPL3-201ENST00000249007 ABCC12Q96J65 1359 aa16.18■□□□□ 0.18
RFPL3-201ENST00000249007 NPC1L1Q9UHC9 1359 aa16.18■□□□□ 0.18
RFPL3-201ENST00000249007 GNAT3A8MTJ3 354 aa16.17■□□□□ 0.18
RFPL3-201ENST00000249007 KCNQ3O43525 872 aa16.16■□□□□ 0.18
RFPL3-201ENST00000249007 CXCL9Q07325 125 aa16.16■□□□□ 0.18
RFPL3-201ENST00000249007 AOC3Q16853 763 aa16.16■□□□□ 0.18
RFPL3-201ENST00000249007 RNF186Q9NXI6 227 aa16.16■□□□□ 0.18
RFPL3-201ENST00000249007 FAM155AB1AL88 458 aaPredicted RBP16.16■□□□□ 0.18
RFPL3-201ENST00000249007 TCERG1O14776 1098 aaKnown RBP16.16■□□□□ 0.18
RFPL3-201ENST00000249007 HOXA10P31260 410 aaPredicted RBP16.16■□□□□ 0.18
RFPL3-201ENST00000249007 HIRAP54198 1017 aaPredicted RBP16.16■□□□□ 0.18
RFPL3-201ENST00000249007 KIF23Q02241 960 aaPredicted RBP16.16■□□□□ 0.18
RFPL3-201ENST00000249007 RGMBQ6NW40 437 aa16.16■□□□□ 0.18
RFPL3-201ENST00000249007 SLC51AQ86UW1 340 aa16.16■□□□□ 0.18
RFPL3-201ENST00000249007 ZNRF3Q9ULT6 936 aa16.16■□□□□ 0.18
RFPL3-201ENST00000249007 HPS5Q9UPZ3 1129 aa16.16■□□□□ 0.18
RFPL3-201ENST00000249007 CDHR2Q9BYE9 1310 aa16.15■□□□□ 0.18
RFPL3-201ENST00000249007 AKAP11Q9UKA4 1901 aa16.15■□□□□ 0.18
RFPL3-201ENST00000249007 BTBD11A6QL63 1104 aa16.15■□□□□ 0.18
RFPL3-201ENST00000249007 PPEF1O14829 653 aaPredicted RBP16.15■□□□□ 0.18
RFPL3-201ENST00000249007 NUTM1Q86Y26 1132 aa16.15■□□□□ 0.18
RFPL3-201ENST00000249007 CCDC102AQ96A19 550 aa16.15■□□□□ 0.18
RFPL3-201ENST00000249007 NYXQ9GZU5 481 aa16.15■□□□□ 0.18
RFPL3-201ENST00000249007 PRAMEF22A3QJZ6 481 aa16.14■□□□□ 0.17
RFPL3-201ENST00000249007 HLFQ16534 295 aa16.14■□□□□ 0.17
RFPL3-201ENST00000249007 USP48Q86UV5 1035 aa16.14■□□□□ 0.17
RFPL3-201ENST00000249007 GAS2L2Q8NHY3 880 aa16.14■□□□□ 0.17
RFPL3-201ENST00000249007 TRPM4Q8TD43 1214 aa16.14■□□□□ 0.17
RFPL3-201ENST00000249007 BCL2L13Q9BXK5 485 aa16.14■□□□□ 0.17
RFPL3-201ENST00000249007 KIF7Q2M1P5 1343 aa16.14■□□□□ 0.17
RFPL3-201ENST00000249007 DIAPH1O60610 1272 aaKnown RBP16.13■□□□□ 0.17
RFPL3-201ENST00000249007 HABP4Q5JVS0 413 aaKnown RBP16.13■□□□□ 0.17
RFPL3-201ENST00000249007 TMX4Q9H1E5 349 aaPredicted RBP16.13■□□□□ 0.17
RFPL3-201ENST00000249007 VPS33BQ9H267 617 aa16.13■□□□□ 0.17
RFPL3-201ENST00000249007 KNSTRNQ9Y448 316 aa16.13■□□□□ 0.17
RFPL3-201ENST00000249007 RIC1Q4ADV7 1423 aa16.13■□□□□ 0.17
RFPL3-201ENST00000249007 NBPF26B4DH59 902 aa16.12■□□□□ 0.17
RFPL3-201ENST00000249007 SNRPA1P09661 255 aaKnown RBP16.12■□□□□ 0.17
RFPL3-201ENST00000249007 ZNF157P51786 506 aaPredicted RBP16.12■□□□□ 0.17
RFPL3-201ENST00000249007 NBPF10Q6P3W6 841 aaKnown RBP16.12■□□□□ 0.17
RFPL3-201ENST00000249007 RBM17Q96I25 401 aaKnown RBP16.12■□□□□ 0.17
RFPL3-201ENST00000249007 CRAMP1Q96RY5 1269 aa16.12■□□□□ 0.17
RFPL3-201ENST00000249007 GBA2Q9HCG7 927 aaPredicted RBP16.12■□□□□ 0.17
RFPL3-201ENST00000249007 CEMIPQ8WUJ3 1361 aa16.12■□□□□ 0.17
RFPL3-201ENST00000249007 DLK2Q6UY11 383 aa16.11■□□□□ 0.17
RFPL3-201ENST00000249007 C2orf69Q8N8R5 385 aa16.11■□□□□ 0.17
RFPL3-201ENST00000249007 PKN2Q16513 984 aaKnown RBP16.1■□□□□ 0.17
RFPL3-201ENST00000249007 CNOT7Q9UIV1 285 aaKnown RBP16.1■□□□□ 0.17
RFPL3-201ENST00000249007 H7C1D1 291 aa16.1■□□□□ 0.17
RFPL3-201ENST00000249007 RAD17O75943 681 aa16.1■□□□□ 0.17
RFPL3-201ENST00000249007 TNIP1Q15025 636 aa16.1■□□□□ 0.17
RFPL3-201ENST00000249007 KRT26Q7Z3Y9 468 aa16.1■□□□□ 0.17
RFPL3-201ENST00000249007 SUPT20HQ8NEM7 779 aa16.1■□□□□ 0.17
RFPL3-201ENST00000249007 CSRNP1Q96S65 589 aa16.1■□□□□ 0.17
RFPL3-201ENST00000249007 CENPFP49454 3210 aa16.09■□□□□ 0.17
RFPL3-201ENST00000249007 CEP290O15078 2479 aa16.09■□□□□ 0.17
RFPL3-201ENST00000249007 SHTN1A0MZ66 631 aa16.09■□□□□ 0.17
RFPL3-201ENST00000249007 ATP6V0A2Q9Y487 856 aa16.09■□□□□ 0.17
RFPL3-201ENST00000249007 HTTP42858 3142 aa16.08■□□□□ 0.16
RFPL3-201ENST00000249007 SLC10A3P09131 477 aa16.08■□□□□ 0.16
RFPL3-201ENST00000249007 MICALL2Q8IY33 904 aa16.08■□□□□ 0.16
RFPL3-201ENST00000249007 HDAC9Q9UKV0 1011 aa16.08■□□□□ 0.16
RFPL3-201ENST00000249007 CUL9Q8IWT3 2517 aa16.07■□□□□ 0.16
RFPL3-201ENST00000249007 A0A0C4DFX4 3053 aa16.07■□□□□ 0.16
RFPL3-201ENST00000249007 SZT2Q5T011 3432 aa16.07■□□□□ 0.16
RFPL3-201ENST00000249007 RTFDC1Q9BY42 306 aaPredicted RBP16.07■□□□□ 0.16
RFPL3-201ENST00000249007 IBTKQ9P2D0 1353 aaPredicted RBP16.06■□□□□ 0.16
RFPL3-201ENST00000249007 KIAA2012Q0VF49 1180 aa16.06■□□□□ 0.16
RFPL3-201ENST00000249007 AMER1Q5JTC6 1135 aaPredicted RBP16.06■□□□□ 0.16
RFPL3-201ENST00000249007 DPP8Q6V1X1 898 aaPredicted RBP16.06■□□□□ 0.16
RFPL3-201ENST00000249007 POLR2AP24928 1970 aaKnown RBP16.06■□□□□ 0.16
RFPL3-201ENST00000249007 BRCA2P51587 3418 aa16.06■□□□□ 0.16
RFPL3-201ENST00000249007 U2SURPO15042 1029 aaKnown RBP16.05■□□□□ 0.16
RFPL3-201ENST00000249007 GPTP24298 496 aa16.05■□□□□ 0.16
RFPL3-201ENST00000249007 C3orf67Q6ZVT6 689 aa16.05■□□□□ 0.16
RFPL3-201ENST00000249007 SAMD7Q7Z3H4 446 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms