RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 CREB3L3Q68CJ9 461 aa30.67■■■□□ 2.5
RAB40C-201ENST00000248139 NCAPD2Q15021 1401 aa30.66■■■□□ 2.5
RAB40C-201ENST00000248139 NEURL1BA8MQ27 555 aa30.66■■■□□ 2.5
RAB40C-201ENST00000248139 FSD1Q9BTV5 496 aa30.66■■■□□ 2.5
RAB40C-201ENST00000248139 SLC52A2Q9HAB3 445 aa30.66■■■□□ 2.5
RAB40C-201ENST00000248139 F13A1P00488 732 aa30.65■■■□□ 2.5
RAB40C-201ENST00000248139 ZSWIM6Q9HCJ5 1215 aa30.65■■■□□ 2.5
RAB40C-201ENST00000248139 NPHP4O75161 1426 aaPredicted RBP30.65■■■□□ 2.5
RAB40C-201ENST00000248139 VPS37CA5D8V6 355 aaPredicted RBP30.65■■■□□ 2.5
RAB40C-201ENST00000248139 DNM1Q05193 864 aaKnown RBP30.65■■■□□ 2.5
RAB40C-201ENST00000248139 ATP5J2-PTCD1G3V325 749 aa30.64■■■□□ 2.5
RAB40C-201ENST00000248139 PTCD1O75127 700 aaKnown RBP30.64■■■□□ 2.5
RAB40C-201ENST00000248139 CSB-PGBD3P0DP91 1061 aa30.64■■■□□ 2.5
RAB40C-201ENST00000248139 TPCN1Q9ULQ1 816 aa30.64■■■□□ 2.5
RAB40C-201ENST00000248139 NPHP3Q7Z494 1330 aa30.64■■■□□ 2.5
RAB40C-201ENST00000248139 GCKRQ14397 625 aa30.63■■■□□ 2.49
RAB40C-201ENST00000248139 ZNF589Q86UQ0 364 aaPredicted RBP30.63■■■□□ 2.49
RAB40C-201ENST00000248139 SLIT3O75094 1523 aa30.63■■■□□ 2.49
RAB40C-201ENST00000248139 VPS53Q5VIR6 699 aa30.63■■■□□ 2.49
RAB40C-201ENST00000248139 LARP1Q6PKG0 1096 aaKnown RBP30.63■■■□□ 2.49
RAB40C-201ENST00000248139 CRYBG1Q9Y4K1 1723 aa30.63■■■□□ 2.49
RAB40C-201ENST00000248139 KDM6AO15550 1401 aaPredicted RBP30.62■■■□□ 2.49
RAB40C-201ENST00000248139 SYAP1Q96A49 352 aaPredicted RBP30.62■■■□□ 2.49
RAB40C-201ENST00000248139 UTYO14607 1347 aa30.62■■■□□ 2.49
RAB40C-201ENST00000248139 PHKG2P15735 406 aa30.62■■■□□ 2.49
RAB40C-201ENST00000248139 NEXNQ0ZGT2 675 aa30.62■■■□□ 2.49
RAB40C-201ENST00000248139 NOL7Q9UMY1 257 aaKnown RBP30.62■■■□□ 2.49
RAB40C-201ENST00000248139 ZKSCAN1P17029 563 aaPredicted RBP30.61■■■□□ 2.49
RAB40C-201ENST00000248139 FAM173BQ6P4H8 233 aa30.61■■■□□ 2.49
RAB40C-201ENST00000248139 MTMR6Q9Y217 621 aa30.61■■■□□ 2.49
RAB40C-201ENST00000248139 PHRF1Q9P1Y6 1649 aaKnown RBP30.61■■■□□ 2.49
RAB40C-201ENST00000248139 SLC27A2O14975 620 aa30.61■■■□□ 2.49
RAB40C-201ENST00000248139 FERMT3Q86UX7 667 aa30.61■■■□□ 2.49
RAB40C-201ENST00000248139 MAP4K1Q92918 833 aa30.6■■■□□ 2.49
RAB40C-201ENST00000248139 UBE3BQ7Z3V4 1068 aa30.59■■■□□ 2.49
RAB40C-201ENST00000248139 HDAC5Q9UQL6 1122 aa30.59■■■□□ 2.49
RAB40C-201ENST00000248139 TATP17735 454 aaPredicted RBP30.59■■■□□ 2.49
RAB40C-201ENST00000248139 ANKRD13DQ6ZTN6 518 aa30.59■■■□□ 2.49
RAB40C-201ENST00000248139 CHMP3Q9Y3E7 222 aa30.59■■■□□ 2.49
RAB40C-201ENST00000248139 STK3Q13188 491 aa30.58■■■□□ 2.49
RAB40C-201ENST00000248139 METTL22Q9BUU2 404 aaPredicted RBP30.58■■■□□ 2.49
RAB40C-201ENST00000248139 HCLS1P14317 486 aaPredicted RBP30.57■■■□□ 2.48
RAB40C-201ENST00000248139 TFCP2Q12800 502 aa30.57■■■□□ 2.48
RAB40C-201ENST00000248139 GIMAP6Q6P9H5 292 aa30.57■■■□□ 2.48
RAB40C-201ENST00000248139 KCNB2Q92953 911 aa30.56■■■□□ 2.48
RAB40C-201ENST00000248139 CYP27B1O15528 508 aa30.56■■■□□ 2.48
RAB40C-201ENST00000248139 TMEM87AQ8NBN3 555 aa30.56■■■□□ 2.48
RAB40C-201ENST00000248139 TM6SF1Q9BZW5 370 aa30.56■■■□□ 2.48
RAB40C-201ENST00000248139 DBNLQ9UJU6 430 aaKnown RBP30.56■■■□□ 2.48
RAB40C-201ENST00000248139 MEGF6O75095 1541 aa30.56■■■□□ 2.48
RAB40C-201ENST00000248139 CCDC129Q6ZRS4 1044 aa30.55■■■□□ 2.48
RAB40C-201ENST00000248139 USP25Q9UHP3 1055 aa30.55■■■□□ 2.48
RAB40C-201ENST00000248139 OVOS2A0A0G2JMS6 1433 aa30.55■■■□□ 2.48
RAB40C-201ENST00000248139 C1orf167Q5SNV9 1468 aa30.55■■■□□ 2.48
RAB40C-201ENST00000248139 SIPA1L3O60292 1781 aaPredicted RBP30.55■■■□□ 2.48
RAB40C-201ENST00000248139 C5P01031 1676 aa30.55■■■□□ 2.48
RAB40C-201ENST00000248139 OFD1O75665 1012 aa30.55■■■□□ 2.48
RAB40C-201ENST00000248139 SEC62Q99442 399 aaKnown RBP30.55■■■□□ 2.48
RAB40C-201ENST00000248139 PTMAP06454 111 aaKnown RBP30.54■■■□□ 2.48
RAB40C-201ENST00000248139 UBE2HP62256 183 aa30.54■■■□□ 2.48
RAB40C-201ENST00000248139 CCDC183Q5T5S1 534 aa30.54■■■□□ 2.48
RAB40C-201ENST00000248139 ZKSCAN5Q9Y2L8 839 aa30.54■■■□□ 2.48
RAB40C-201ENST00000248139 HS1BP3Q53T59 392 aa30.54■■■□□ 2.48
RAB40C-201ENST00000248139 TTC5Q8N0Z6 440 aa30.54■■■□□ 2.48
RAB40C-201ENST00000248139 ZNF830Q96NB3 372 aaPredicted RBP30.54■■■□□ 2.48
RAB40C-201ENST00000248139 DNAJC2Q99543 621 aaKnown RBP30.54■■■□□ 2.48
RAB40C-201ENST00000248139 R3HCC1Q9Y3T6 440 aaKnown RBP30.54■■■□□ 2.48
RAB40C-201ENST00000248139 SLFNL1Q499Z3 407 aa30.53■■■□□ 2.48
RAB40C-201ENST00000248139 LRP10Q7Z4F1 713 aa30.53■■■□□ 2.48
RAB40C-201ENST00000248139 C19orf44Q9H6X5 657 aa30.53■■■□□ 2.48
RAB40C-201ENST00000248139 PHF14O94880 888 aa30.52■■■□□ 2.48
RAB40C-201ENST00000248139 PTPN12Q05209 780 aaKnown RBP30.52■■■□□ 2.48
RAB40C-201ENST00000248139 LARP1BQ659C4 914 aaKnown RBP30.52■■■□□ 2.48
RAB40C-201ENST00000248139 CDC37L1Q7L3B6 337 aa30.52■■■□□ 2.48
RAB40C-201ENST00000248139 IFNL2Q8IZJ0 200 aa30.52■■■□□ 2.48
RAB40C-201ENST00000248139 ZSCAN31Q96LW9 406 aaPredicted RBP30.52■■■□□ 2.48
RAB40C-201ENST00000248139 BLOC1S2Q6QNY1 142 aa30.51■■■□□ 2.48
RAB40C-201ENST00000248139 SH2B1Q9NRF2 756 aaPredicted RBP30.51■■■□□ 2.48
RAB40C-201ENST00000248139 TRPM3Q9HCF6 1732 aaPredicted RBP30.51■■■□□ 2.47
RAB40C-201ENST00000248139 A0A087WZG4 1122 aa30.5■■■□□ 2.47
RAB40C-201ENST00000248139 PLCB2Q00722 1185 aa30.5■■■□□ 2.47
RAB40C-201ENST00000248139 DBNDD2Q9BQY9 259 aa30.5■■■□□ 2.47
RAB40C-201ENST00000248139 COL15A1P39059 1388 aa30.5■■■□□ 2.47
RAB40C-201ENST00000248139 SNRPA1P09661 255 aaKnown RBP30.5■■■□□ 2.47
RAB40C-201ENST00000248139 RFX5P48382 616 aaPredicted RBP30.5■■■□□ 2.47
RAB40C-201ENST00000248139 TNNI3KQ59H18 835 aa30.49■■■□□ 2.47
RAB40C-201ENST00000248139 CCDC39Q9UFE4 941 aa30.49■■■□□ 2.47
RAB40C-201ENST00000248139 FPGT-TNNI3KV9GXZ4 949 aa30.49■■■□□ 2.47
RAB40C-201ENST00000248139 HIP1O00291 1037 aa30.49■■■□□ 2.47
RAB40C-201ENST00000248139 TOB2Q14106 344 aaPredicted RBP30.49■■■□□ 2.47
RAB40C-201ENST00000248139 DDX46Q7L014 1031 aaKnown RBP30.49■■■□□ 2.47
RAB40C-201ENST00000248139 ATP6V1DQ9Y5K8 247 aa30.48■■■□□ 2.47
RAB40C-201ENST00000248139 TAF5LO75529 589 aa30.48■■■□□ 2.47
RAB40C-201ENST00000248139 MED23Q9ULK4 1368 aa30.47■■■□□ 2.47
RAB40C-201ENST00000248139 ZNF500O60304 480 aaPredicted RBP30.47■■■□□ 2.47
RAB40C-201ENST00000248139 RPS6KB1P23443 525 aa30.47■■■□□ 2.47
RAB40C-201ENST00000248139 LRRC2Q9BYS8 371 aa30.47■■■□□ 2.47
RAB40C-201ENST00000248139 PSMA5P28066 241 aa30.46■■■□□ 2.47
RAB40C-201ENST00000248139 TFIP11Q9UBB9 837 aaKnown RBP30.46■■■□□ 2.47
RAB40C-201ENST00000248139 ZNF142P52746 1687 aaPredicted RBP30.46■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms