RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 PLA2G12BQ9BX93 195 aa29.28■■■□□ 2.28
RRP9-201ENST00000232888 BTAF1O14981 1849 aa29.27■■■□□ 2.28
RRP9-201ENST00000232888 HLFQ16534 295 aa29.27■■■□□ 2.28
RRP9-201ENST00000232888 CLASRPQ8N2M8 674 aaKnown RBP29.27■■■□□ 2.28
RRP9-201ENST00000232888 CDHR2Q9BYE9 1310 aa29.27■■■□□ 2.28
RRP9-201ENST00000232888 RFX5P48382 616 aaPredicted RBP29.26■■■□□ 2.28
RRP9-201ENST00000232888 NLRP10Q86W26 655 aa29.26■■■□□ 2.28
RRP9-201ENST00000232888 JARID2Q92833 1246 aaPredicted RBP29.26■■■□□ 2.28
RRP9-201ENST00000232888 CDC45O75419 566 aa29.26■■■□□ 2.27
RRP9-201ENST00000232888 BCL11BQ9C0K0 894 aaPredicted RBP29.26■■■□□ 2.27
RRP9-201ENST00000232888 IL1RAPL2Q9NP60 686 aa29.26■■■□□ 2.27
RRP9-201ENST00000232888 TBC1D2BQ9UPU7 963 aa29.26■■■□□ 2.27
RRP9-201ENST00000232888 PA2G4Q9UQ80 394 aaKnown RBP29.26■■■□□ 2.27
RRP9-201ENST00000232888 SEC24BO95487 1268 aa29.25■■■□□ 2.27
RRP9-201ENST00000232888 LMBR1LQ6UX01 489 aa29.25■■■□□ 2.27
RRP9-201ENST00000232888 FAM196AQ6ZSG2 479 aa29.25■■■□□ 2.27
RRP9-201ENST00000232888 ZNF34Q8IZ26 560 aa29.25■■■□□ 2.27
RRP9-201ENST00000232888 LINC00116Q8NCU8 138 aa29.24■■■□□ 2.27
RRP9-201ENST00000232888 ANKRD36CQ5JPF3 1778 aa29.24■■■□□ 2.27
RRP9-201ENST00000232888 USP42Q9H9J4 1324 aaKnown RBP29.24■■■□□ 2.27
RRP9-201ENST00000232888 BCL11AQ9H165 835 aa29.23■■■□□ 2.27
RRP9-201ENST00000232888 RBM6P78332 1123 aaKnown RBP29.22■■■□□ 2.27
RRP9-201ENST00000232888 PTPN12Q05209 780 aaKnown RBP29.22■■■□□ 2.27
RRP9-201ENST00000232888 PTF1AQ7RTS3 328 aa29.22■■■□□ 2.27
RRP9-201ENST00000232888 SBF2Q86WG5 1849 aa29.22■■■□□ 2.27
RRP9-201ENST00000232888 CAMTA2O94983 1202 aa29.22■■■□□ 2.27
RRP9-201ENST00000232888 KRT27Q7Z3Y8 459 aa29.22■■■□□ 2.27
RRP9-201ENST00000232888 TTC41PQ6P2S7 1318 aa29.21■■■□□ 2.27
RRP9-201ENST00000232888 MYH14Q7Z406 1995 aaKnown RBP29.21■■■□□ 2.27
RRP9-201ENST00000232888 SDSP20132 328 aa29.21■■■□□ 2.27
RRP9-201ENST00000232888 FAM182BQ5T319 152 aa29.21■■■□□ 2.27
RRP9-201ENST00000232888 ZNF652Q9Y2D9 606 aa29.21■■■□□ 2.27
RRP9-201ENST00000232888 NUP98P52948 1817 aa29.21■■■□□ 2.27
RRP9-201ENST00000232888 PARP10Q53GL7 1025 aa29.2■■■□□ 2.26
RRP9-201ENST00000232888 CASC1Q6TDU7 716 aa29.2■■■□□ 2.26
RRP9-201ENST00000232888 CLEC4GQ6UXB4 293 aa29.2■■■□□ 2.26
RRP9-201ENST00000232888 DDRGK1Q96HY6 314 aa29.2■■■□□ 2.26
RRP9-201ENST00000232888 GPATCH3Q96I76 525 aa29.2■■■□□ 2.26
RRP9-201ENST00000232888 IPO9Q96P70 1041 aaKnown RBP29.2■■■□□ 2.26
RRP9-201ENST00000232888 CCNL1Q9UK58 526 aaPredicted RBP29.2■■■□□ 2.26
RRP9-201ENST00000232888 SASH1O94885 1247 aa29.19■■■□□ 2.26
RRP9-201ENST00000232888 TBC1D9Q6ZT07 1266 aa29.19■■■□□ 2.26
RRP9-201ENST00000232888 AK7Q96M32 723 aa29.19■■■□□ 2.26
RRP9-201ENST00000232888 GPTP24298 496 aa29.18■■■□□ 2.26
RRP9-201ENST00000232888 HMGB2P26583 209 aaKnown RBP29.18■■■□□ 2.26
RRP9-201ENST00000232888 FBXO3Q9UK99 471 aa29.18■■■□□ 2.26
RRP9-201ENST00000232888 CSF1RP07333 972 aa29.18■■■□□ 2.26
RRP9-201ENST00000232888 NUTM1Q86Y26 1132 aa29.18■■■□□ 2.26
RRP9-201ENST00000232888 FAM89AQ96GI7 184 aa29.18■■■□□ 2.26
RRP9-201ENST00000232888 TBC1D32Q96NH3 1257 aa29.18■■■□□ 2.26
RRP9-201ENST00000232888 LY75O60449 1722 aa29.17■■■□□ 2.26
RRP9-201ENST00000232888 RPS6KA4O75676 772 aa29.17■■■□□ 2.26
RRP9-201ENST00000232888 IFIT2P09913 472 aaKnown RBP29.17■■■□□ 2.26
RRP9-201ENST00000232888 RTL5Q5HYW3 569 aaPredicted RBP29.17■■■□□ 2.26
RRP9-201ENST00000232888 TRMT112Q9UI30 125 aaKnown RBP29.17■■■□□ 2.26
RRP9-201ENST00000232888 ERC2O15083 957 aa29.16■■■□□ 2.26
RRP9-201ENST00000232888 HSP90B1P14625 803 aaKnown RBP29.16■■■□□ 2.26
RRP9-201ENST00000232888 SIL1Q9H173 461 aa29.15■■■□□ 2.26
RRP9-201ENST00000232888 CHMP3Q9Y3E7 222 aa29.15■■■□□ 2.26
RRP9-201ENST00000232888 CIAO1O76071 339 aa29.14■■■□□ 2.26
RRP9-201ENST00000232888 GLRX3O76003 335 aaKnown RBP29.13■■■□□ 2.25
RRP9-201ENST00000232888 MFAP1P55081 439 aaKnown RBP29.13■■■□□ 2.25
RRP9-201ENST00000232888 CCDC57Q2TAC2 916 aa29.13■■■□□ 2.25
RRP9-201ENST00000232888 KLHDC4Q8TBB5 520 aa29.13■■■□□ 2.25
RRP9-201ENST00000232888 ECHDC1Q9NTX5 307 aa29.13■■■□□ 2.25
RRP9-201ENST00000232888 UBN2Q6ZU65 1347 aa29.13■■■□□ 2.25
RRP9-201ENST00000232888 IL15P40933 162 aaPredicted RBP29.13■■■□□ 2.25
RRP9-201ENST00000232888 AACSQ86V21 672 aa29.13■■■□□ 2.25
RRP9-201ENST00000232888 PI4K2BQ8TCG2 481 aa29.13■■■□□ 2.25
RRP9-201ENST00000232888 IRS4O14654 1257 aaPredicted RBP29.12■■■□□ 2.25
RRP9-201ENST00000232888 UTP14AQ9BVJ6 771 aaKnown RBP29.12■■■□□ 2.25
RRP9-201ENST00000232888 PDE8AO60658 829 aa29.11■■■□□ 2.25
RRP9-201ENST00000232888 C22orf23Q9BZE7 217 aa29.11■■■□□ 2.25
RRP9-201ENST00000232888 GPR108Q9NPR9 543 aa29.11■■■□□ 2.25
RRP9-201ENST00000232888 BCORQ6W2J9 1755 aa29.1■■■□□ 2.25
RRP9-201ENST00000232888 SH3TC1Q8TE82 1336 aa29.1■■■□□ 2.25
RRP9-201ENST00000232888 EAF2Q96CJ1 260 aaPredicted RBP29.1■■■□□ 2.25
RRP9-201ENST00000232888 EYA2O00167 538 aa29.09■■■□□ 2.25
RRP9-201ENST00000232888 SLC27A3Q5K4L6 730 aa29.09■■■□□ 2.25
RRP9-201ENST00000232888 TSHZ3Q63HK5 1081 aa29.09■■■□□ 2.25
RRP9-201ENST00000232888 RTCBQ9Y3I0 505 aaKnown RBP29.09■■■□□ 2.25
RRP9-201ENST00000232888 BRWD3Q6RI45 1802 aa29.09■■■□□ 2.25
RRP9-201ENST00000232888 CTSWP56202 376 aa29.09■■■□□ 2.25
RRP9-201ENST00000232888 IFIT5Q13325 482 aaKnown RBP29.09■■■□□ 2.25
RRP9-201ENST00000232888 SUSD4Q5VX71 490 aa29.09■■■□□ 2.25
RRP9-201ENST00000232888 NARFQ9UHQ1 456 aa29.09■■■□□ 2.25
RRP9-201ENST00000232888 TUBGCP6Q96RT7 1819 aa29.08■■■□□ 2.25
RRP9-201ENST00000232888 KCNQ4P56696 695 aa29.08■■■□□ 2.25
RRP9-201ENST00000232888 TTLL11Q8NHH1 800 aa29.08■■■□□ 2.25
RRP9-201ENST00000232888 NIP7Q9Y221 180 aaKnown RBP eCLIP29.08■■■□□ 2.25
RRP9-201ENST00000232888 TRIM6-TRIM34B2RNG4 842 aa29.07■■■□□ 2.24
RRP9-201ENST00000232888 TFCP2Q12800 502 aa29.07■■■□□ 2.24
RRP9-201ENST00000232888 ATG9AQ7Z3C6 839 aa29.07■■■□□ 2.24
RRP9-201ENST00000232888 GNPATO15228 680 aa29.06■■■□□ 2.24
RRP9-201ENST00000232888 RBM25P49756 843 aaKnown RBP29.06■■■□□ 2.24
RRP9-201ENST00000232888 TNNI3KQ59H18 835 aa29.06■■■□□ 2.24
RRP9-201ENST00000232888 CNTROBQ8N137 903 aa29.06■■■□□ 2.24
RRP9-201ENST00000232888 FPGT-TNNI3KV9GXZ4 949 aa29.06■■■□□ 2.24
RRP9-201ENST00000232888 TAF1LQ8IZX4 1826 aa29.05■■■□□ 2.24
RRP9-201ENST00000232888 RXRBP28702 533 aa29.05■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms