RNA–Protein interactions for RNA: ENST00000229268.12

USP5-201, Transcript of ubiquitin specific peptidase 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP5, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP5-201ENST00000229268 FOXD4L5Q5VV16 416 aaPredicted RBP16.28■□□□□ 0.2
USP5-201ENST00000229268 FOXD4L4Q8WXT5 416 aaPredicted RBP16.28■□□□□ 0.2
USP5-201ENST00000229268 CYP19A1P11511 503 aaPredicted RBP16.27■□□□□ 0.2
USP5-201ENST00000229268 DBNDD2Q9BQY9 259 aa16.27■□□□□ 0.2
USP5-201ENST00000229268 TCIRG1Q13488 830 aa16.27■□□□□ 0.19
USP5-201ENST00000229268 DZIP3Q86Y13 1208 aaKnown RBP16.27■□□□□ 0.19
USP5-201ENST00000229268 NHSL1Q5SYE7 1610 aa16.27■□□□□ 0.19
USP5-201ENST00000229268 KIAA1211Q6ZU35 1233 aa16.26■□□□□ 0.19
USP5-201ENST00000229268 FSD1Q9BTV5 496 aa16.26■□□□□ 0.19
USP5-201ENST00000229268 TRMT112Q9UI30 125 aaKnown RBP16.26■□□□□ 0.19
USP5-201ENST00000229268 SIPA1L3O60292 1781 aaPredicted RBP16.26■□□□□ 0.19
USP5-201ENST00000229268 UTYO14607 1347 aa16.26■□□□□ 0.19
USP5-201ENST00000229268 KCNJ4P48050 445 aa16.26■□□□□ 0.19
USP5-201ENST00000229268 BICDL1Q6ZP65 573 aa16.26■□□□□ 0.19
USP5-201ENST00000229268 H7C1W4 665 aa16.26■□□□□ 0.19
USP5-201ENST00000229268 FOXO4P98177 505 aa16.26■□□□□ 0.19
USP5-201ENST00000229268 FAM227BQ96M60 508 aa16.26■□□□□ 0.19
USP5-201ENST00000229268 BRPF3Q9ULD4 1205 aa16.26■□□□□ 0.19
USP5-201ENST00000229268 CCDC57Q2TAC2 916 aa16.25■□□□□ 0.19
USP5-201ENST00000229268 SLFNL1Q499Z3 407 aa16.25■□□□□ 0.19
USP5-201ENST00000229268 CCDC191Q8NCU4 936 aa16.25■□□□□ 0.19
USP5-201ENST00000229268 TEX13AQ9BXU3 409 aaPredicted RBP16.25■□□□□ 0.19
USP5-201ENST00000229268 DBNLQ9UJU6 430 aaKnown RBP16.25■□□□□ 0.19
USP5-201ENST00000229268 K7ELQ4 463 aaPredicted RBP16.24■□□□□ 0.19
USP5-201ENST00000229268 CPA1P15085 419 aa16.24■□□□□ 0.19
USP5-201ENST00000229268 DDX46Q7L014 1031 aaKnown RBP16.24■□□□□ 0.19
USP5-201ENST00000229268 USP21Q9UK80 565 aa16.24■□□□□ 0.19
USP5-201ENST00000229268 MRC1P22897 1456 aa16.24■□□□□ 0.19
USP5-201ENST00000229268 SPATA31A5Q5VU36 1347 aa16.24■□□□□ 0.19
USP5-201ENST00000229268 SPATA31A7Q8IWB4 1347 aa16.24■□□□□ 0.19
USP5-201ENST00000229268 LOC102724428A0A0B4J2F2 783 aa16.24■□□□□ 0.19
USP5-201ENST00000229268 RFX5P48382 616 aaPredicted RBP16.24■□□□□ 0.19
USP5-201ENST00000229268 CASP7P55210 303 aa16.24■□□□□ 0.19
USP5-201ENST00000229268 SIK1P57059 783 aa16.24■□□□□ 0.19
USP5-201ENST00000229268 SNRKQ9NRH2 765 aa16.24■□□□□ 0.19
USP5-201ENST00000229268 LTBP4Q8N2S1 1624 aa16.24■□□□□ 0.19
USP5-201ENST00000229268 PKD1L3Q7Z443 1732 aa16.24■□□□□ 0.19
USP5-201ENST00000229268 HCLS1P14317 486 aaPredicted RBP16.24■□□□□ 0.19
USP5-201ENST00000229268 TNNI3KQ59H18 835 aa16.24■□□□□ 0.19
USP5-201ENST00000229268 ANTXR1Q9H6X2 564 aa16.24■□□□□ 0.19
USP5-201ENST00000229268 FPGT-TNNI3KV9GXZ4 949 aa16.24■□□□□ 0.19
USP5-201ENST00000229268 ABCA3Q99758 1704 aa16.23■□□□□ 0.19
USP5-201ENST00000229268 CRKLP46109 303 aaKnown RBP16.23■□□□□ 0.19
USP5-201ENST00000229268 ITPK1Q13572 414 aa16.23■□□□□ 0.19
USP5-201ENST00000229268 RABEP1Q15276 862 aa16.23■□□□□ 0.19
USP5-201ENST00000229268 GORABQ5T7V8 394 aa16.23■□□□□ 0.19
USP5-201ENST00000229268 GZF1Q9H116 711 aaPredicted RBP16.23■□□□□ 0.19
USP5-201ENST00000229268 BCL9O00512 1426 aa16.23■□□□□ 0.19
USP5-201ENST00000229268 ERBB4Q15303 1308 aa16.23■□□□□ 0.19
USP5-201ENST00000229268 PARP4Q9UKK3 1724 aaKnown RBP16.22■□□□□ 0.19
USP5-201ENST00000229268 MCCP23508 829 aa16.22■□□□□ 0.19
USP5-201ENST00000229268 COPRSQ9NQ92 184 aa16.22■□□□□ 0.19
USP5-201ENST00000229268 ABCC6O95255 1503 aa16.22■□□□□ 0.19
USP5-201ENST00000229268 KCPQ6ZWJ8 1503 aa16.22■□□□□ 0.19
USP5-201ENST00000229268 HELBQ8NG08 1087 aaPredicted RBP16.22■□□□□ 0.19
USP5-201ENST00000229268 MAP3K15Q6ZN16 1313 aa16.22■□□□□ 0.19
USP5-201ENST00000229268 CCDC24Q8N4L8 307 aa16.22■□□□□ 0.19
USP5-201ENST00000229268 ADAMTS7Q9UKP4 1686 aa16.21■□□□□ 0.19
USP5-201ENST00000229268 ST18O60284 1047 aa16.21■□□□□ 0.19
USP5-201ENST00000229268 GIGYF2Q6Y7W6 1299 aaKnown RBP16.21■□□□□ 0.19
USP5-201ENST00000229268 PTH1RQ03431 593 aa16.21■□□□□ 0.19
USP5-201ENST00000229268 FOXD4L6Q3SYB3 417 aaPredicted RBP16.21■□□□□ 0.19
USP5-201ENST00000229268 FOXD4L3Q6VB84 417 aaPredicted RBP16.21■□□□□ 0.19
USP5-201ENST00000229268 UBE2Q2Q8WVN8 375 aa16.21■□□□□ 0.19
USP5-201ENST00000229268 TTC41PQ6P2S7 1318 aa16.21■□□□□ 0.18
USP5-201ENST00000229268 NMIQ13287 307 aaPredicted RBP16.2■□□□□ 0.18
USP5-201ENST00000229268 VSIG10Q8N0Z9 540 aa16.2■□□□□ 0.18
USP5-201ENST00000229268 ZGPATQ8N5A5 531 aaKnown RBP16.2■□□□□ 0.18
USP5-201ENST00000229268 PHLPP1O60346 1717 aa16.2■□□□□ 0.18
USP5-201ENST00000229268 SNAP23O00161 211 aa16.2■□□□□ 0.18
USP5-201ENST00000229268 IRS4O14654 1257 aaPredicted RBP16.2■□□□□ 0.18
USP5-201ENST00000229268 HSPA1LP34931 641 aa16.2■□□□□ 0.18
USP5-201ENST00000229268 FKBP4Q02790 459 aaKnown RBP eCLIP16.2■□□□□ 0.18
USP5-201ENST00000229268 IFIT5Q13325 482 aaKnown RBP16.2■□□□□ 0.18
USP5-201ENST00000229268 RABL6Q3YEC7 729 aaPredicted RBP16.2■□□□□ 0.18
USP5-201ENST00000229268 TPRNQ4KMQ1 711 aa16.2■□□□□ 0.18
USP5-201ENST00000229268 PRPF40BQ6NWY9 871 aaKnown RBP16.2■□□□□ 0.18
USP5-201ENST00000229268 NLRP10Q86W26 655 aa16.2■□□□□ 0.18
USP5-201ENST00000229268 ISCA1Q9BUE6 129 aa16.2■□□□□ 0.18
USP5-201ENST00000229268 CHMP5Q9NZZ3 219 aa16.2■□□□□ 0.18
USP5-201ENST00000229268 SGSM2O43147 1006 aa16.2■□□□□ 0.18
USP5-201ENST00000229268 SEC62Q99442 399 aaKnown RBP16.2■□□□□ 0.18
USP5-201ENST00000229268 GREM2Q9H772 168 aa16.2■□□□□ 0.18
USP5-201ENST00000229268 GOLIM4O00461 696 aa16.19■□□□□ 0.18
USP5-201ENST00000229268 CCDC129Q6ZRS4 1044 aa16.19■□□□□ 0.18
USP5-201ENST00000229268 DISP2A7MBM2 1401 aa16.19■□□□□ 0.18
USP5-201ENST00000229268 LDHAL6AQ6ZMR3 332 aa16.19■□□□□ 0.18
USP5-201ENST00000229268 ATG9AQ7Z3C6 839 aa16.19■□□□□ 0.18
USP5-201ENST00000229268 RASEFQ8IZ41 740 aa16.19■□□□□ 0.18
USP5-201ENST00000229268 SNX21Q969T3 373 aa16.19■□□□□ 0.18
USP5-201ENST00000229268 EVI5LQ96CN4 794 aa16.19■□□□□ 0.18
USP5-201ENST00000229268 CNNM1Q9NRU3 951 aa16.19■□□□□ 0.18
USP5-201ENST00000229268 CCDC87Q9NVE4 849 aa16.19■□□□□ 0.18
USP5-201ENST00000229268 CEP126Q9P2H0 1117 aa16.19■□□□□ 0.18
USP5-201ENST00000229268 A0A0D9SFI3 127 aa16.18■□□□□ 0.18
USP5-201ENST00000229268 TCEANC2Q96MN5 208 aa16.18■□□□□ 0.18
USP5-201ENST00000229268 CDCA7Q9BWT1 371 aaPredicted RBP16.18■□□□□ 0.18
USP5-201ENST00000229268 EYA2O00167 538 aa16.18■□□□□ 0.18
USP5-201ENST00000229268 ITGA6P23229 1130 aa16.18■□□□□ 0.18
USP5-201ENST00000229268 THRAP3Q9Y2W1 955 aaKnown RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms