RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 GLRX3O76003 335 aaKnown RBP20.53■□□□□ 0.88
GAPDH-201ENST00000229239 AIMP1Q12904 312 aaKnown RBP20.53■□□□□ 0.88
GAPDH-201ENST00000229239 PTF1AQ7RTS3 328 aa20.53■□□□□ 0.88
GAPDH-201ENST00000229239 CNTROBQ8N137 903 aa20.53■□□□□ 0.88
GAPDH-201ENST00000229239 DDX54Q8TDD1 881 aaKnown RBP20.53■□□□□ 0.88
GAPDH-201ENST00000229239 CWC22Q9HCG8 908 aaKnown RBP20.53■□□□□ 0.88
GAPDH-201ENST00000229239 NEURL1BA8MQ27 555 aa20.52■□□□□ 0.88
GAPDH-201ENST00000229239 IGKV5-2P06315 115 aa20.52■□□□□ 0.88
GAPDH-201ENST00000229239 COPS6Q7L5N1 327 aa20.52■□□□□ 0.88
GAPDH-201ENST00000229239 NUP188Q5SRE5 1749 aa20.52■□□□□ 0.87
GAPDH-201ENST00000229239 ANKRD13DQ6ZTN6 518 aa20.52■□□□□ 0.87
GAPDH-201ENST00000229239 SUCLG2Q96I99 432 aa20.52■□□□□ 0.87
GAPDH-201ENST00000229239 RGPD3A6NKT7 1758 aaPredicted RBP20.51■□□□□ 0.87
GAPDH-201ENST00000229239 RGPD4Q7Z3J3 1758 aa20.51■□□□□ 0.87
GAPDH-201ENST00000229239 MYL6BP14649 208 aa20.51■□□□□ 0.87
GAPDH-201ENST00000229239 GCKRQ14397 625 aa20.51■□□□□ 0.87
GAPDH-201ENST00000229239 USP16Q9Y5T5 823 aa20.51■□□□□ 0.87
GAPDH-201ENST00000229239 KAZALD1Q96I82 304 aa20.5■□□□□ 0.87
GAPDH-201ENST00000229239 BICC1Q9H694 974 aaKnown RBP20.5■□□□□ 0.87
GAPDH-201ENST00000229239 PLSCR1O15162 318 aa20.49■□□□□ 0.87
GAPDH-201ENST00000229239 KCNQ2O43526 872 aa20.49■□□□□ 0.87
GAPDH-201ENST00000229239 ACSBG1Q96GR2 724 aa20.49■□□□□ 0.87
GAPDH-201ENST00000229239 ECHDC1Q9NTX5 307 aa20.49■□□□□ 0.87
GAPDH-201ENST00000229239 NUCB2P80303 420 aa20.48■□□□□ 0.87
GAPDH-201ENST00000229239 G3BP1Q13283 466 aaKnown RBP eCLIP20.48■□□□□ 0.873e-47■□□□□ 11.1
GAPDH-201ENST00000229239 CLEC17AQ6ZS10 378 aa20.48■□□□□ 0.87
GAPDH-201ENST00000229239 ANO2Q9NQ90 1003 aa20.48■□□□□ 0.87
GAPDH-201ENST00000229239 UBR2Q8IWV8 1755 aa20.48■□□□□ 0.87
GAPDH-201ENST00000229239 IFIT2P09913 472 aaKnown RBP20.47■□□□□ 0.87
GAPDH-201ENST00000229239 PLBD2Q8NHP8 589 aa20.47■□□□□ 0.87
GAPDH-201ENST00000229239 TNPO1Q92973 898 aaKnown RBP20.47■□□□□ 0.87
GAPDH-201ENST00000229239 MYD88Q99836 296 aa20.47■□□□□ 0.87
GAPDH-201ENST00000229239 PAPPAQ13219 1627 aa20.47■□□□□ 0.87
GAPDH-201ENST00000229239 SKOR2Q2VWA4 1001 aaPredicted RBP20.46■□□□□ 0.87
GAPDH-201ENST00000229239 SGSM2O43147 1006 aa20.45■□□□□ 0.86
GAPDH-201ENST00000229239 RUFY2Q8WXA3 655 aa20.45■□□□□ 0.86
GAPDH-201ENST00000229239 AK9Q5TCS8 1911 aa20.45■□□□□ 0.86
GAPDH-201ENST00000229239 PSDA5PKW4 1024 aaPredicted RBP20.45■□□□□ 0.86
GAPDH-201ENST00000229239 NHSQ6T4R5 1651 aa20.45■□□□□ 0.86
GAPDH-201ENST00000229239 LRP5O75197 1615 aa20.44■□□□□ 0.86
GAPDH-201ENST00000229239 ARFGEF2Q9Y6D5 1785 aa20.44■□□□□ 0.86
GAPDH-201ENST00000229239 SHANK3Q9BYB0 1731 aa20.44■□□□□ 0.86
GAPDH-201ENST00000229239 GOLGA6L22H0YM25 854 aa20.43■□□□□ 0.86
GAPDH-201ENST00000229239 HSPA4P34932 840 aa20.43■□□□□ 0.86
GAPDH-201ENST00000229239 RABL6Q3YEC7 729 aaPredicted RBP20.43■□□□□ 0.86
GAPDH-201ENST00000229239 L1TD1Q5T7N2 865 aaKnown RBP20.43■□□□□ 0.86
GAPDH-201ENST00000229239 COPRSQ9NQ92 184 aa20.43■□□□□ 0.86
GAPDH-201ENST00000229239 PA2G4Q9UQ80 394 aaKnown RBP20.43■□□□□ 0.86
GAPDH-201ENST00000229239 KCPQ6ZWJ8 1503 aa20.43■□□□□ 0.86
GAPDH-201ENST00000229239 RAD50Q92878 1312 aa20.43■□□□□ 0.86
GAPDH-201ENST00000229239 HIP1O00291 1037 aa20.43■□□□□ 0.86
GAPDH-201ENST00000229239 TRAK2O60296 914 aa20.43■□□□□ 0.86
GAPDH-201ENST00000229239 R3HDM1Q15032 1099 aaKnown RBP20.43■□□□□ 0.86
GAPDH-201ENST00000229239 EVI5LQ96CN4 794 aa20.43■□□□□ 0.86
GAPDH-201ENST00000229239 SASH1O94885 1247 aa20.42■□□□□ 0.86
GAPDH-201ENST00000229239 NEK4P51957 841 aa20.42■□□□□ 0.86
GAPDH-201ENST00000229239 NBPF14Q5TI25 921 aa20.42■□□□□ 0.86
GAPDH-201ENST00000229239 AACSQ86V21 672 aa20.42■□□□□ 0.86
GAPDH-201ENST00000229239 ISY1Q9ULR0 285 aaKnown RBP20.42■□□□□ 0.86
GAPDH-201ENST00000229239 KAT6BQ8WYB5 2073 aa20.42■□□□□ 0.86
GAPDH-201ENST00000229239 PROM2Q8N271 834 aa20.41■□□□□ 0.86
GAPDH-201ENST00000229239 KIAA1211Q6ZU35 1233 aa20.41■□□□□ 0.86
GAPDH-201ENST00000229239 FOXD4L1Q9NU39 408 aa20.41■□□□□ 0.86
GAPDH-201ENST00000229239 SYTL4Q96C24 671 aaPredicted RBP20.4■□□□□ 0.86
GAPDH-201ENST00000229239 DIAPH3Q9NSV4 1193 aa20.4■□□□□ 0.86
GAPDH-201ENST00000229239 CYP2E1P05181 493 aaPredicted RBP20.39■□□□□ 0.86
GAPDH-201ENST00000229239 PRIM1P49642 420 aaKnown RBP20.39■□□□□ 0.86
GAPDH-201ENST00000229239 TXNRD1Q16881 649 aa20.39■□□□□ 0.86
GAPDH-201ENST00000229239 INTS4Q96HW7 963 aaKnown RBP20.39■□□□□ 0.85
GAPDH-201ENST00000229239 LSG1Q9H089 658 aaKnown RBP20.39■□□□□ 0.85
GAPDH-201ENST00000229239 PALD1Q9ULE6 856 aa20.39■□□□□ 0.85
GAPDH-201ENST00000229239 AFDNP55196 1824 aaKnown RBP20.39■□□□□ 0.85
GAPDH-201ENST00000229239 BTAF1O14981 1849 aa20.38■□□□□ 0.85
GAPDH-201ENST00000229239 NBPF26B4DH59 902 aa20.38■□□□□ 0.85
GAPDH-201ENST00000229239 MAP4K4O95819 1239 aaPredicted RBP20.38■□□□□ 0.85
GAPDH-201ENST00000229239 CASP7P55210 303 aa20.38■□□□□ 0.85
GAPDH-201ENST00000229239 CUL4AQ13619 759 aa20.38■□□□□ 0.85
GAPDH-201ENST00000229239 NBPF10Q6P3W6 841 aaKnown RBP20.38■□□□□ 0.85
GAPDH-201ENST00000229239 NBPF15Q8N660 670 aa20.38■□□□□ 0.85
GAPDH-201ENST00000229239 EAF2Q96CJ1 260 aaPredicted RBP20.38■□□□□ 0.85
GAPDH-201ENST00000229239 A0A087WZG4 1122 aa20.37■□□□□ 0.85
GAPDH-201ENST00000229239 RFX5P48382 616 aaPredicted RBP20.37■□□□□ 0.85
GAPDH-201ENST00000229239 TEX13AQ9BXU3 409 aaPredicted RBP20.37■□□□□ 0.85
GAPDH-201ENST00000229239 H7C1W4 665 aa20.37■□□□□ 0.85
GAPDH-201ENST00000229239 EPHA10Q5JZY3 1008 aa20.37■□□□□ 0.85
GAPDH-201ENST00000229239 VSIG10Q8N0Z9 540 aa20.37■□□□□ 0.85
GAPDH-201ENST00000229239 TMX3Q96JJ7 454 aa20.37■□□□□ 0.85
GAPDH-201ENST00000229239 SSFA2P28290 1259 aa20.36■□□□□ 0.85
GAPDH-201ENST00000229239 UBE3BQ7Z3V4 1068 aa20.36■□□□□ 0.85
GAPDH-201ENST00000229239 IL25Q9H293 177 aa20.36■□□□□ 0.85
GAPDH-201ENST00000229239 SNRKQ9NRH2 765 aa20.36■□□□□ 0.85
GAPDH-201ENST00000229239 CWC25Q9NXE8 425 aaPredicted RBP20.35■□□□□ 0.85
GAPDH-201ENST00000229239 PTPN12Q05209 780 aaKnown RBP20.35■□□□□ 0.85
GAPDH-201ENST00000229239 CWC27Q6UX04 472 aaKnown RBP20.35■□□□□ 0.85
GAPDH-201ENST00000229239 CCDC191Q8NCU4 936 aa20.35■□□□□ 0.85
GAPDH-201ENST00000229239 TMOD3Q9NYL9 352 aa20.35■□□□□ 0.85
GAPDH-201ENST00000229239 PIP4K2AP48426 406 aaPredicted RBP20.34■□□□□ 0.85
GAPDH-201ENST00000229239 TICAM2Q86XR7 235 aa20.34■□□□□ 0.85
GAPDH-201ENST00000229239 BAG4O95429 457 aaKnown RBP20.33■□□□□ 0.85
GAPDH-201ENST00000229239 KCNB2Q92953 911 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms