RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 CHAMP1Q96JM3 812 aa19.05■□□□□ 0.64
SF3A2-201ENST00000221494 TTC14Q96N46 770 aa19.05■□□□□ 0.64
SF3A2-201ENST00000221494 HOXB7P09629 217 aa19.04■□□□□ 0.64
SF3A2-201ENST00000221494 NKX1-1Q15270 411 aaPredicted RBP19.04■□□□□ 0.64
SF3A2-201ENST00000221494 HEG1Q9ULI3 1381 aa19.04■□□□□ 0.64
SF3A2-201ENST00000221494 GOLGA6L6A8MZA4 724 aa19.04■□□□□ 0.64
SF3A2-201ENST00000221494 SLC4A10Q6U841 1118 aa19.04■□□□□ 0.64
SF3A2-201ENST00000221494 RILPL2Q969X0 211 aa19.04■□□□□ 0.64
SF3A2-201ENST00000221494 FUCA2Q9BTY2 467 aa19.04■□□□□ 0.64
SF3A2-201ENST00000221494 LIMCH1Q9UPQ0 1083 aa19.04■□□□□ 0.64
SF3A2-201ENST00000221494 KIF3AQ9Y496 699 aa19.04■□□□□ 0.64
SF3A2-201ENST00000221494 G2E3Q7L622 706 aa19.03■□□□□ 0.64
SF3A2-201ENST00000221494 SSH3Q8TE77 659 aa19.03■□□□□ 0.64
SF3A2-201ENST00000221494 STX6O43752 255 aa19.02■□□□□ 0.64
SF3A2-201ENST00000221494 SGSM2O43147 1006 aa19.02■□□□□ 0.64
SF3A2-201ENST00000221494 F13A1P00488 732 aa19.02■□□□□ 0.64
SF3A2-201ENST00000221494 FLIIQ13045 1269 aa19.02■□□□□ 0.64
SF3A2-201ENST00000221494 HDGFL1Q5TGJ6 251 aa19.02■□□□□ 0.64
SF3A2-201ENST00000221494 ZNF790Q6PG37 636 aa19.02■□□□□ 0.64
SF3A2-201ENST00000221494 NECTIN2Q92692 538 aa19.02■□□□□ 0.64
SF3A2-201ENST00000221494 ZSCAN31Q96LW9 406 aaPredicted RBP19.02■□□□□ 0.64
SF3A2-201ENST00000221494 KDM3BQ7LBC6 1761 aa19.02■□□□□ 0.63
SF3A2-201ENST00000221494 USP42Q9H9J4 1324 aaKnown RBP19.02■□□□□ 0.63
SF3A2-201ENST00000221494 DISP2A7MBM2 1401 aa19.02■□□□□ 0.63
SF3A2-201ENST00000221494 PARP4Q9UKK3 1724 aaKnown RBP19.01■□□□□ 0.63
SF3A2-201ENST00000221494 MRC1P22897 1456 aa19.01■□□□□ 0.63
SF3A2-201ENST00000221494 JCADQ9P266 1359 aa19.01■□□□□ 0.63
SF3A2-201ENST00000221494 GIGYF1O75420 1035 aaPredicted RBP19.01■□□□□ 0.63
SF3A2-201ENST00000221494 DMTNQ08495 405 aa19.01■□□□□ 0.63
SF3A2-201ENST00000221494 DHX37Q8IY37 1157 aaKnown RBP19.01■□□□□ 0.63
SF3A2-201ENST00000221494 DDX54Q8TDD1 881 aaKnown RBP19.01■□□□□ 0.63
SF3A2-201ENST00000221494 F6X3S4 739 aa19.01■□□□□ 0.63
SF3A2-201ENST00000221494 CHAF1AQ13111 956 aaPredicted RBP19.01■□□□□ 0.63
SF3A2-201ENST00000221494 SLC39A6Q13433 755 aa19.01■□□□□ 0.63
SF3A2-201ENST00000221494 GTPBP4Q9BZE4 634 aaKnown RBP19.01■□□□□ 0.63
SF3A2-201ENST00000221494 UPF3BQ9BZI7 483 aaKnown RBP19.01■□□□□ 0.63
SF3A2-201ENST00000221494 SH2B1Q9NRF2 756 aaPredicted RBP19.01■□□□□ 0.63
SF3A2-201ENST00000221494 CCDC171Q6TFL3 1326 aa19■□□□□ 0.63
SF3A2-201ENST00000221494 PNMA6EA0A0J9YXQ4 647 aa19■□□□□ 0.63
SF3A2-201ENST00000221494 TM6SF1Q9BZW5 370 aa19■□□□□ 0.63
SF3A2-201ENST00000221494 CABP4P57796 275 aa18.99■□□□□ 0.63
SF3A2-201ENST00000221494 SAMD1Q6SPF0 538 aaPredicted RBP18.99■□□□□ 0.63
SF3A2-201ENST00000221494 CNTROBQ8N137 903 aa18.99■□□□□ 0.63
SF3A2-201ENST00000221494 KIAA1524Q8TCG1 905 aa18.99■□□□□ 0.63
SF3A2-201ENST00000221494 SMC3Q9UQE7 1217 aa18.99■□□□□ 0.63
SF3A2-201ENST00000221494 SNX14Q9Y5W7 946 aa18.99■□□□□ 0.63
SF3A2-201ENST00000221494 ERVV-2B6SEH9 535 aa18.99■□□□□ 0.63
SF3A2-201ENST00000221494 HCLS1P14317 486 aaPredicted RBP18.99■□□□□ 0.63
SF3A2-201ENST00000221494 EIF2S2P20042 333 aaKnown RBP18.99■□□□□ 0.63
SF3A2-201ENST00000221494 SYT1P21579 422 aa18.99■□□□□ 0.63
SF3A2-201ENST00000221494 POLA2Q14181 598 aa18.99■□□□□ 0.63
SF3A2-201ENST00000221494 HSP90AB4PQ58FF6 505 aa18.99■□□□□ 0.63
SF3A2-201ENST00000221494 CNPY2Q9Y2B0 182 aa18.99■□□□□ 0.63
SF3A2-201ENST00000221494 SIPA1L3O60292 1781 aaPredicted RBP18.98■□□□□ 0.63
SF3A2-201ENST00000221494 SCN11AQ9UI33 1791 aa18.98■□□□□ 0.63
SF3A2-201ENST00000221494 SYCP1Q15431 976 aa18.98■□□□□ 0.63
SF3A2-201ENST00000221494 ZNF710Q8N1W2 664 aa18.98■□□□□ 0.63
SF3A2-201ENST00000221494 KCNB2Q92953 911 aa18.98■□□□□ 0.63
SF3A2-201ENST00000221494 LSG1Q9H089 658 aaKnown RBP18.98■□□□□ 0.63
SF3A2-201ENST00000221494 SLIT2O94813 1529 aa18.98■□□□□ 0.63
SF3A2-201ENST00000221494 UBTFL1P0CB47 393 aaPredicted RBP18.97■□□□□ 0.63
SF3A2-201ENST00000221494 GDPD2Q9HCC8 539 aa18.97■□□□□ 0.63
SF3A2-201ENST00000221494 SPATA31A1Q5TZJ5 1347 aa18.97■□□□□ 0.63
SF3A2-201ENST00000221494 PRAMEF22A3QJZ6 481 aa18.97■□□□□ 0.63
SF3A2-201ENST00000221494 CCDC192P0DO97 292 aa18.97■□□□□ 0.63
SF3A2-201ENST00000221494 VPS53Q5VIR6 699 aa18.97■□□□□ 0.63
SF3A2-201ENST00000221494 PI4K2BQ8TCG2 481 aa18.97■□□□□ 0.63
SF3A2-201ENST00000221494 RUFY2Q8WXA3 655 aa18.97■□□□□ 0.63
SF3A2-201ENST00000221494 KIF1BPQ96EK5 621 aa18.97■□□□□ 0.63
SF3A2-201ENST00000221494 ELP1O95163 1332 aa18.97■□□□□ 0.63
SF3A2-201ENST00000221494 TTC41PQ6P2S7 1318 aa18.97■□□□□ 0.63
SF3A2-201ENST00000221494 AK2P54819 239 aa18.96■□□□□ 0.63
SF3A2-201ENST00000221494 TSHZ3Q63HK5 1081 aa18.96■□□□□ 0.63
SF3A2-201ENST00000221494 UNC5CLQ8IV45 518 aa18.96■□□□□ 0.63
SF3A2-201ENST00000221494 LRRFIP2Q9Y608 721 aaKnown RBP18.96■□□□□ 0.63
SF3A2-201ENST00000221494 NOL8Q76FK4 1167 aaKnown RBP18.95■□□□□ 0.62
SF3A2-201ENST00000221494 ZNF496Q96IT1 587 aaPredicted RBP18.95■□□□□ 0.62
SF3A2-201ENST00000221494 TTC12Q9H892 705 aaPredicted RBP18.95■□□□□ 0.62
SF3A2-201ENST00000221494 CHPF2Q9P2E5 772 aa18.95■□□□□ 0.62
SF3A2-201ENST00000221494 CTIFO43310 598 aaKnown RBP18.95■□□□□ 0.62
SF3A2-201ENST00000221494 THRAP3Q9Y2W1 955 aaKnown RBP18.95■□□□□ 0.62
SF3A2-201ENST00000221494 PAXIP1Q6ZW49 1069 aaPredicted RBP18.94■□□□□ 0.62
SF3A2-201ENST00000221494 RUFY3Q7L099 469 aa18.94■□□□□ 0.62
SF3A2-201ENST00000221494 ANKRD7Q92527 254 aa18.94■□□□□ 0.62
SF3A2-201ENST00000221494 USP44Q9H0E7 712 aa18.94■□□□□ 0.62
SF3A2-201ENST00000221494 PHAXQ9H814 394 aaKnown RBP18.94■□□□□ 0.62
SF3A2-201ENST00000221494 SPATA31A5Q5VU36 1347 aa18.94■□□□□ 0.62
SF3A2-201ENST00000221494 SPATA31A7Q8IWB4 1347 aa18.94■□□□□ 0.62
SF3A2-201ENST00000221494 PLCH1Q4KWH8 1693 aa18.94■□□□□ 0.62
SF3A2-201ENST00000221494 ZSCAN20P17040 1043 aaPredicted RBP18.93■□□□□ 0.62
SF3A2-201ENST00000221494 SHANK3Q9BYB0 1731 aa18.93■□□□□ 0.62
SF3A2-201ENST00000221494 SPATA31A6Q5VVP1 1343 aa18.93■□□□□ 0.62
SF3A2-201ENST00000221494 EXOC5O00471 708 aa18.93■□□□□ 0.62
SF3A2-201ENST00000221494 KIF20AO95235 890 aa18.93■□□□□ 0.62
SF3A2-201ENST00000221494 TTC5Q8N0Z6 440 aa18.93■□□□□ 0.62
SF3A2-201ENST00000221494 RHPN1Q8TCX5 695 aa18.93■□□□□ 0.62
SF3A2-201ENST00000221494 CDCA7Q9BWT1 371 aaPredicted RBP18.93■□□□□ 0.62
SF3A2-201ENST00000221494 MTMR6Q9Y217 621 aa18.93■□□□□ 0.62
SF3A2-201ENST00000221494 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.92■□□□□ 0.62
SF3A2-201ENST00000221494 FAM200AQ8TCP9 573 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms