RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 MAP3K11Q16584 847 aa14.6□□□□□ -0.07
TM9SF4-201ENST00000217315 METTL24Q5JXM2 366 aa14.6□□□□□ -0.07
TM9SF4-201ENST00000217315 FAM227BQ96M60 508 aa14.6□□□□□ -0.07
TM9SF4-201ENST00000217315 NEK1Q96PY6 1258 aa14.6□□□□□ -0.07
TM9SF4-201ENST00000217315 BCL11BQ9C0K0 894 aaPredicted RBP14.6□□□□□ -0.07
TM9SF4-201ENST00000217315 U3KPZ7 1027 aaPredicted RBP14.6□□□□□ -0.07
TM9SF4-201ENST00000217315 NPHP3Q7Z494 1330 aa14.6□□□□□ -0.07
TM9SF4-201ENST00000217315 CREB3L3Q68CJ9 461 aa14.6□□□□□ -0.07
TM9SF4-201ENST00000217315 ZNF496Q96IT1 587 aaPredicted RBP14.6□□□□□ -0.07
TM9SF4-201ENST00000217315 MYO3AQ8NEV4 1616 aa14.6□□□□□ -0.07
TM9SF4-201ENST00000217315 RAD50Q92878 1312 aa14.6□□□□□ -0.07
TM9SF4-201ENST00000217315 SETD1BQ9UPS6 1966 aaKnown RBP14.6□□□□□ -0.07
TM9SF4-201ENST00000217315 DHX16O60231 1041 aaKnown RBP14.59□□□□□ -0.07
TM9SF4-201ENST00000217315 CREBRFQ8IUR6 639 aa14.59□□□□□ -0.07
TM9SF4-201ENST00000217315 BRF1Q92994 677 aa14.59□□□□□ -0.07
TM9SF4-201ENST00000217315 SCAND2PQ9GZW5 306 aaPredicted RBP14.59□□□□□ -0.07
TM9SF4-201ENST00000217315 CFAP45Q9UL16 551 aa14.59□□□□□ -0.07
TM9SF4-201ENST00000217315 STARD3NLO95772 234 aa14.59□□□□□ -0.07
TM9SF4-201ENST00000217315 ATP2B1P20020 1258 aa14.59□□□□□ -0.07
TM9SF4-201ENST00000217315 ZNF396Q96N95 335 aaPredicted RBP14.59□□□□□ -0.07
TM9SF4-201ENST00000217315 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.59□□□□□ -0.071e-6■■■□□ 18.1
TM9SF4-201ENST00000217315 RBSNQ9H1K0 784 aa14.59□□□□□ -0.07
TM9SF4-201ENST00000217315 CCDC171Q6TFL3 1326 aa14.59□□□□□ -0.07
TM9SF4-201ENST00000217315 PRAMEF22A3QJZ6 481 aa14.59□□□□□ -0.07
TM9SF4-201ENST00000217315 F13A1P00488 732 aa14.59□□□□□ -0.07
TM9SF4-201ENST00000217315 HSPA4P34932 840 aa14.59□□□□□ -0.07
TM9SF4-201ENST00000217315 TFCP2Q12800 502 aa14.59□□□□□ -0.07
TM9SF4-201ENST00000217315 IFIT5Q13325 482 aaKnown RBP14.58□□□□□ -0.07
TM9SF4-201ENST00000217315 ZCRB1Q8TBF4 217 aaKnown RBP14.58□□□□□ -0.07
TM9SF4-201ENST00000217315 CCDC34Q96HJ3 373 aa14.58□□□□□ -0.07
TM9SF4-201ENST00000217315 NDUFB9Q9Y6M9 179 aa14.58□□□□□ -0.07
TM9SF4-201ENST00000217315 AOX1Q06278 1338 aa14.58□□□□□ -0.08
TM9SF4-201ENST00000217315 HAND2P61296 217 aa14.58□□□□□ -0.08
TM9SF4-201ENST00000217315 DCAF5Q96JK2 942 aa14.58□□□□□ -0.08
TM9SF4-201ENST00000217315 CTNNA3Q9UI47 895 aa14.58□□□□□ -0.08
TM9SF4-201ENST00000217315 CD163L1Q9NR16 1453 aa14.58□□□□□ -0.08
TM9SF4-201ENST00000217315 KIF2CQ99661 725 aa14.58□□□□□ -0.08
TM9SF4-201ENST00000217315 ERICH2A1L162 156 aa14.57□□□□□ -0.08
TM9SF4-201ENST00000217315 TPM2P07951 284 aa14.57□□□□□ -0.08
TM9SF4-201ENST00000217315 PDIA4P13667 645 aaKnown RBP14.57□□□□□ -0.08
TM9SF4-201ENST00000217315 EDC3Q96F86 508 aaKnown RBP14.57□□□□□ -0.08
TM9SF4-201ENST00000217315 MPHOSPH8Q99549 860 aa14.57□□□□□ -0.08
TM9SF4-201ENST00000217315 HSPA2P54652 639 aa14.57□□□□□ -0.08
TM9SF4-201ENST00000217315 IMMTQ16891 758 aaKnown RBP14.57□□□□□ -0.08
TM9SF4-201ENST00000217315 HMG20BQ9P0W2 317 aa14.57□□□□□ -0.08
TM9SF4-201ENST00000217315 STAP2Q9UGK3 403 aa14.57□□□□□ -0.08
TM9SF4-201ENST00000217315 RASSF8Q8NHQ8 419 aa14.57□□□□□ -0.08
TM9SF4-201ENST00000217315 SLC52A2Q9HAB3 445 aa14.56□□□□□ -0.08
TM9SF4-201ENST00000217315 USP16Q9Y5T5 823 aa14.56□□□□□ -0.08
TM9SF4-201ENST00000217315 CLTCQ00610 1675 aaKnown RBP14.56□□□□□ -0.08
TM9SF4-201ENST00000217315 FSD2A1L4K1 749 aa14.56□□□□□ -0.08
TM9SF4-201ENST00000217315 SAFBQ15424 915 aaKnown RBP eCLIP14.56□□□□□ -0.08
TM9SF4-201ENST00000217315 VPS53Q5VIR6 699 aa14.56□□□□□ -0.08
TM9SF4-201ENST00000217315 ARHGEF25Q86VW2 580 aa14.56□□□□□ -0.08
TM9SF4-201ENST00000217315 EAF2Q96CJ1 260 aaPredicted RBP14.56□□□□□ -0.08
TM9SF4-201ENST00000217315 TMEM63CQ9P1W3 806 aa14.56□□□□□ -0.08
TM9SF4-201ENST00000217315 AKAP2Q9Y2D5 859 aa14.56□□□□□ -0.08
TM9SF4-201ENST00000217315 RUFY3Q7L099 469 aa14.56□□□□□ -0.08
TM9SF4-201ENST00000217315 VSIG10Q8N0Z9 540 aa14.56□□□□□ -0.08
TM9SF4-201ENST00000217315 METTL22Q9BUU2 404 aaPredicted RBP14.56□□□□□ -0.08
TM9SF4-201ENST00000217315 TIMM10P62072 90 aa14.55□□□□□ -0.08
TM9SF4-201ENST00000217315 GCKRQ14397 625 aa14.55□□□□□ -0.08
TM9SF4-201ENST00000217315 ADCY5O95622 1261 aa14.55□□□□□ -0.08
TM9SF4-201ENST00000217315 BRD1O95696 1058 aa14.55□□□□□ -0.08
TM9SF4-201ENST00000217315 FAM173BQ6P4H8 233 aa14.55□□□□□ -0.08
TM9SF4-201ENST00000217315 LDHAL6AQ6ZMR3 332 aa14.55□□□□□ -0.08
TM9SF4-201ENST00000217315 RAB11FIP4Q86YS3 637 aa14.55□□□□□ -0.08
TM9SF4-201ENST00000217315 DBNDD2Q9BQY9 259 aa14.55□□□□□ -0.08
TM9SF4-201ENST00000217315 ARHGEF28Q8N1W1 1705 aaKnown RBP14.55□□□□□ -0.08
TM9SF4-201ENST00000217315 COL3A1P02461 1466 aaPredicted RBP14.55□□□□□ -0.08
TM9SF4-201ENST00000217315 MCMDC2Q4G0Z9 681 aa14.55□□□□□ -0.08
TM9SF4-201ENST00000217315 RASEFQ8IZ41 740 aa14.55□□□□□ -0.08
TM9SF4-201ENST00000217315 PREX1Q8TCU6 1659 aa14.54□□□□□ -0.08
TM9SF4-201ENST00000217315 PTH1RQ03431 593 aa14.54□□□□□ -0.08
TM9SF4-201ENST00000217315 NAT10Q9H0A0 1025 aaKnown RBP14.54□□□□□ -0.08
TM9SF4-201ENST00000217315 TRMT112Q9UI30 125 aaKnown RBP14.54□□□□□ -0.08
TM9SF4-201ENST00000217315 GADD45BO75293 160 aaPredicted RBP14.54□□□□□ -0.08
TM9SF4-201ENST00000217315 HMGB1P09429 215 aaKnown RBP14.54□□□□□ -0.08
TM9SF4-201ENST00000217315 CCDC129Q6ZRS4 1044 aa14.54□□□□□ -0.08
TM9SF4-201ENST00000217315 ZNF445P59923 1031 aa14.54□□□□□ -0.08
TM9SF4-201ENST00000217315 ZNF830Q96NB3 372 aaPredicted RBP14.54□□□□□ -0.08
TM9SF4-201ENST00000217315 DLC1Q96QB1 1528 aa14.53□□□□□ -0.08
TM9SF4-201ENST00000217315 UQCRHLA0A096LP55 91 aa14.53□□□□□ -0.08
TM9SF4-201ENST00000217315 UQCRHP07919 91 aa14.53□□□□□ -0.08
TM9SF4-201ENST00000217315 Q6ZUG5 572 aa14.53□□□□□ -0.08
TM9SF4-201ENST00000217315 TPM3P06753 285 aa14.53□□□□□ -0.08
TM9SF4-201ENST00000217315 TMEM131LA2VDJ0 1609 aa14.53□□□□□ -0.08
TM9SF4-201ENST00000217315 CHST3Q7LGC8 479 aa14.53□□□□□ -0.08
TM9SF4-201ENST00000217315 A1BGP04217 495 aa14.52□□□□□ -0.08
TM9SF4-201ENST00000217315 FILIP1Q7Z7B0 1213 aa14.52□□□□□ -0.08
TM9SF4-201ENST00000217315 NEURL1BA8MQ27 555 aa14.52□□□□□ -0.08
TM9SF4-201ENST00000217315 SLC27A2O14975 620 aa14.52□□□□□ -0.08
TM9SF4-201ENST00000217315 SART3Q15020 963 aaKnown RBP14.52□□□□□ -0.08
TM9SF4-201ENST00000217315 ZSCAN25Q6NSZ9 544 aa14.52□□□□□ -0.08
TM9SF4-201ENST00000217315 IL15P40933 162 aaPredicted RBP14.52□□□□□ -0.09
TM9SF4-201ENST00000217315 HMGN5P82970 282 aaKnown RBP14.52□□□□□ -0.09
TM9SF4-201ENST00000217315 TNNI3KQ59H18 835 aa14.52□□□□□ -0.09
TM9SF4-201ENST00000217315 FPGT-TNNI3KV9GXZ4 949 aa14.52□□□□□ -0.09
TM9SF4-201ENST00000217315 SMC2O95347 1197 aa14.51□□□□□ -0.09
TM9SF4-201ENST00000217315 AIDAQ96BJ3 306 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms