RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 NAA30Q147X3 362 aaPredicted RBP11.45□□□□□ -0.58
TUBB1-201ENST00000217133 ADCK5Q3MIX3 580 aa11.45□□□□□ -0.58
TUBB1-201ENST00000217133 DDX19AQ9NUU7 478 aaKnown RBP11.45□□□□□ -0.58
TUBB1-201ENST00000217133 CTNNA3Q9UI47 895 aa11.45□□□□□ -0.58
TUBB1-201ENST00000217133 ADGRL3Q9HAR2 1447 aa11.45□□□□□ -0.58
TUBB1-201ENST00000217133 TTC21BQ7Z4L5 1316 aa11.45□□□□□ -0.58
TUBB1-201ENST00000217133 ME3Q16798 604 aa11.45□□□□□ -0.58
TUBB1-201ENST00000217133 SCAND2PQ9GZW5 306 aaPredicted RBP11.45□□□□□ -0.58
TUBB1-201ENST00000217133 GABPB1Q06547 395 aaPredicted RBP11.45□□□□□ -0.58
TUBB1-201ENST00000217133 HSP90AB4PQ58FF6 505 aa11.45□□□□□ -0.58
TUBB1-201ENST00000217133 CEP135Q66GS9 1140 aa11.45□□□□□ -0.58
TUBB1-201ENST00000217133 MAP3K19Q56UN5 1328 aa11.45□□□□□ -0.58
TUBB1-201ENST00000217133 PTH1RQ03431 593 aa11.44□□□□□ -0.58
TUBB1-201ENST00000217133 SYCP1Q15431 976 aa11.44□□□□□ -0.58
TUBB1-201ENST00000217133 HDGFL1Q5TGJ6 251 aa11.44□□□□□ -0.58
TUBB1-201ENST00000217133 CDC37L1Q7L3B6 337 aa11.44□□□□□ -0.58
TUBB1-201ENST00000217133 DNAJC25Q9H1X3 360 aa11.44□□□□□ -0.58
TUBB1-201ENST00000217133 AMPHP49418 695 aa11.44□□□□□ -0.58
TUBB1-201ENST00000217133 CLASRPQ8N2M8 674 aaKnown RBP11.44□□□□□ -0.58
TUBB1-201ENST00000217133 GPATCH3Q96I76 525 aa11.44□□□□□ -0.58
TUBB1-201ENST00000217133 CHD2O14647 1828 aaKnown RBP11.44□□□□□ -0.58
TUBB1-201ENST00000217133 EIF2S2P20042 333 aaKnown RBP11.44□□□□□ -0.58
TUBB1-201ENST00000217133 ARHGEF10O15013 1369 aa11.43□□□□□ -0.58
TUBB1-201ENST00000217133 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.43□□□□□ -0.58
TUBB1-201ENST00000217133 PDIA4P13667 645 aaKnown RBP11.43□□□□□ -0.58
TUBB1-201ENST00000217133 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.43□□□□□ -0.58
TUBB1-201ENST00000217133 ZSWIM6Q9HCJ5 1215 aa11.43□□□□□ -0.58
TUBB1-201ENST00000217133 NPHP3Q7Z494 1330 aa11.43□□□□□ -0.58
TUBB1-201ENST00000217133 IFIT2P09913 472 aaKnown RBP11.43□□□□□ -0.58
TUBB1-201ENST00000217133 PSMA5P28066 241 aa11.43□□□□□ -0.58
TUBB1-201ENST00000217133 CADPS2Q86UW7 1296 aa11.43□□□□□ -0.58
TUBB1-201ENST00000217133 CABLES1Q8TDN4 633 aa11.43□□□□□ -0.58
TUBB1-201ENST00000217133 CACTINQ8WUQ7 758 aaKnown RBP11.43□□□□□ -0.58
TUBB1-201ENST00000217133 SLAIN2Q9P270 581 aa11.43□□□□□ -0.58
TUBB1-201ENST00000217133 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.43□□□□□ -0.58
TUBB1-201ENST00000217133 DDX41Q9UJV9 622 aaKnown RBP11.43□□□□□ -0.58
TUBB1-201ENST00000217133 V9GYY5 206 aaPredicted RBP11.43□□□□□ -0.58
TUBB1-201ENST00000217133 BECN2A8MW95 431 aa11.43□□□□□ -0.58
TUBB1-201ENST00000217133 HTATSF1O43719 755 aaKnown RBP11.43□□□□□ -0.58
TUBB1-201ENST00000217133 PIP4K2BP78356 416 aa11.43□□□□□ -0.58
TUBB1-201ENST00000217133 PTPN14Q15678 1187 aa11.43□□□□□ -0.58
TUBB1-201ENST00000217133 TCEANC2Q96MN5 208 aa11.43□□□□□ -0.58
TUBB1-201ENST00000217133 TM6SF1Q9BZW5 370 aa11.43□□□□□ -0.58
TUBB1-201ENST00000217133 STRCP1A6NGW2 1772 aa11.43□□□□□ -0.58
TUBB1-201ENST00000217133 CDK11BP21127 795 aaKnown RBP11.42□□□□□ -0.58
TUBB1-201ENST00000217133 STK3Q13188 491 aa11.42□□□□□ -0.58
TUBB1-201ENST00000217133 KRT222Q8N1A0 295 aa11.42□□□□□ -0.58
TUBB1-201ENST00000217133 BBXQ8WY36 941 aaPredicted RBP11.42□□□□□ -0.58
TUBB1-201ENST00000217133 CLSTN2Q9H4D0 955 aa11.42□□□□□ -0.58
TUBB1-201ENST00000217133 TPCN1Q9ULQ1 816 aa11.42□□□□□ -0.58
TUBB1-201ENST00000217133 ELP1O95163 1332 aa11.42□□□□□ -0.58
TUBB1-201ENST00000217133 TDRD7Q8NHU6 1098 aaKnown RBP11.42□□□□□ -0.58
TUBB1-201ENST00000217133 PHAXQ9H814 394 aaKnown RBP11.42□□□□□ -0.58
TUBB1-201ENST00000217133 RBM8AQ9Y5S9 174 aaKnown RBP11.42□□□□□ -0.58
TUBB1-201ENST00000217133 CCDC66A2RUB6 948 aa11.41□□□□□ -0.58
TUBB1-201ENST00000217133 BLOC1S2Q6QNY1 142 aa11.41□□□□□ -0.58
TUBB1-201ENST00000217133 KRT28Q7Z3Y7 464 aa11.41□□□□□ -0.58
TUBB1-201ENST00000217133 FILIP1Q7Z7B0 1213 aa11.41□□□□□ -0.58
TUBB1-201ENST00000217133 GNAT3A8MTJ3 354 aa11.41□□□□□ -0.58
TUBB1-201ENST00000217133 NPHP1O15259 732 aa11.41□□□□□ -0.58
TUBB1-201ENST00000217133 PLA2G4DQ86XP0 818 aa11.41□□□□□ -0.58
TUBB1-201ENST00000217133 ZNF397Q8NF99 534 aaPredicted RBP11.41□□□□□ -0.58
TUBB1-201ENST00000217133 LEO1Q8WVC0 666 aaPredicted RBP11.41□□□□□ -0.58
TUBB1-201ENST00000217133 ECHDC1Q9NTX5 307 aa11.41□□□□□ -0.58
TUBB1-201ENST00000217133 TRMT1Q9NXH9 659 aaKnown RBP11.41□□□□□ -0.58
TUBB1-201ENST00000217133 TTC41PQ6P2S7 1318 aa11.41□□□□□ -0.58
TUBB1-201ENST00000217133 CCDC171Q6TFL3 1326 aa11.41□□□□□ -0.58
TUBB1-201ENST00000217133 H3BQV1 296 aa11.41□□□□□ -0.58
TUBB1-201ENST00000217133 IFFO2Q5TF58 517 aa11.41□□□□□ -0.58
TUBB1-201ENST00000217133 RNF20Q5VTR2 975 aa11.41□□□□□ -0.58
TUBB1-201ENST00000217133 CREB3L3Q68CJ9 461 aa11.41□□□□□ -0.58
TUBB1-201ENST00000217133 KIF18AQ8NI77 898 aa11.41□□□□□ -0.58
TUBB1-201ENST00000217133 NALCNQ8IZF0 1738 aa11.41□□□□□ -0.58
TUBB1-201ENST00000217133 USP6P35125 1406 aa11.4□□□□□ -0.58
TUBB1-201ENST00000217133 RGPD8O14715 1765 aaPredicted RBP11.4□□□□□ -0.58
TUBB1-201ENST00000217133 NBPF7P0C2Y1 421 aaPredicted RBP11.4□□□□□ -0.58
TUBB1-201ENST00000217133 POLA2Q14181 598 aa11.4□□□□□ -0.58
TUBB1-201ENST00000217133 ANKRD1Q15327 319 aa11.4□□□□□ -0.58
TUBB1-201ENST00000217133 LARP1Q6PKG0 1096 aaKnown RBP11.4□□□□□ -0.58
TUBB1-201ENST00000217133 ZNF215Q9UL58 517 aaPredicted RBP11.4□□□□□ -0.58
TUBB1-201ENST00000217133 NR1I2O75469 434 aa11.4□□□□□ -0.58
TUBB1-201ENST00000217133 SKILP12757 684 aa11.4□□□□□ -0.58
TUBB1-201ENST00000217133 ST3GAL1Q11201 340 aa11.4□□□□□ -0.58
TUBB1-201ENST00000217133 TAF7Q15545 349 aaPredicted RBP11.4□□□□□ -0.58
TUBB1-201ENST00000217133 BRINP3Q76B58 766 aa11.4□□□□□ -0.58
TUBB1-201ENST00000217133 CEBPZQ03701 1054 aaKnown RBP11.4□□□□□ -0.59
TUBB1-201ENST00000217133 CCDC144BQ3MJ40 725 aa11.4□□□□□ -0.59
TUBB1-201ENST00000217133 CCDC144CPQ8IYA2 1237 aa11.4□□□□□ -0.59
TUBB1-201ENST00000217133 C1orf167Q5SNV9 1468 aa11.4□□□□□ -0.59
TUBB1-201ENST00000217133 NEMFO60524 1076 aa11.39□□□□□ -0.59
TUBB1-201ENST00000217133 LTV1Q96GA3 475 aaPredicted RBP11.39□□□□□ -0.59
TUBB1-201ENST00000217133 EYA1Q99502 592 aa11.39□□□□□ -0.59
TUBB1-201ENST00000217133 MORC2Q9Y6X9 1032 aaPredicted RBP11.39□□□□□ -0.59
TUBB1-201ENST00000217133 ERICH4A6NGS2 130 aa11.39□□□□□ -0.59
TUBB1-201ENST00000217133 CAVIN2O95810 425 aa11.39□□□□□ -0.59
TUBB1-201ENST00000217133 MAP3K5Q99683 1374 aa11.39□□□□□ -0.59
TUBB1-201ENST00000217133 AACSQ86V21 672 aa11.39□□□□□ -0.59
TUBB1-201ENST00000217133 LRRC8AQ8IWT6 810 aa11.39□□□□□ -0.59
TUBB1-201ENST00000217133 EVI5LQ96CN4 794 aa11.39□□□□□ -0.59
TUBB1-201ENST00000217133 SLFN14P0C7P3 912 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms