RNA–Protein interactions for RNA: ENST00000216492.9

CHGA-201, Transcript of chromogranin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHGA, Length 2,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-201ENST00000216492 GSPT1P15170 499 aaKnown RBP20.76■□□□□ 0.91
CHGA-201ENST00000216492 HLFQ16534 295 aa20.76■□□□□ 0.91
CHGA-201ENST00000216492 DZIP3Q86Y13 1208 aaKnown RBP20.76■□□□□ 0.91
CHGA-201ENST00000216492 OTUD7AQ8TE49 926 aaPredicted RBP20.76■□□□□ 0.91
CHGA-201ENST00000216492 CIZ1Q9ULV3 898 aaPredicted RBP20.76■□□□□ 0.91
CHGA-201ENST00000216492 ERVV-1B6SEH8 477 aa20.74■□□□□ 0.91
CHGA-201ENST00000216492 CASC1Q6TDU7 716 aa20.74■□□□□ 0.91
CHGA-201ENST00000216492 IL27Q8NEV9 243 aa20.74■□□□□ 0.91
CHGA-201ENST00000216492 HSP90AB3PQ58FF7 597 aa20.74■□□□□ 0.91
CHGA-201ENST00000216492 RHPN1Q8TCX5 695 aa20.74■□□□□ 0.91
CHGA-201ENST00000216492 KIF2CQ99661 725 aa20.74■□□□□ 0.91
CHGA-201ENST00000216492 ARFGEF2Q9Y6D5 1785 aa20.74■□□□□ 0.91
CHGA-201ENST00000216492 ZNF772Q68DY9 489 aaPredicted RBP20.73■□□□□ 0.91
CHGA-201ENST00000216492 KIF1BPQ96EK5 621 aa20.73■□□□□ 0.91
CHGA-201ENST00000216492 COL15A1P39059 1388 aa20.73■□□□□ 0.91
CHGA-201ENST00000216492 DDX11L8A8MPP1 907 aa20.73■□□□□ 0.91
CHGA-201ENST00000216492 KCNQ4P56696 695 aa20.73■□□□□ 0.91
CHGA-201ENST00000216492 OS9Q13438 667 aaPredicted RBP20.73■□□□□ 0.91
CHGA-201ENST00000216492 L1TD1Q5T7N2 865 aaKnown RBP20.73■□□□□ 0.91
CHGA-201ENST00000216492 PA2G4Q9UQ80 394 aaKnown RBP20.73■□□□□ 0.91
CHGA-201ENST00000216492 DDIT3P35638 169 aa20.72■□□□□ 0.91
CHGA-201ENST00000216492 RABL6Q3YEC7 729 aaPredicted RBP20.72■□□□□ 0.91
CHGA-201ENST00000216492 IL1RAPL2Q9NP60 686 aa20.72■□□□□ 0.91
CHGA-201ENST00000216492 BRPF3Q9ULD4 1205 aa20.72■□□□□ 0.91
CHGA-201ENST00000216492 HSP90AA1P07900 732 aaKnown RBP20.71■□□□□ 0.91
CHGA-201ENST00000216492 TJP1Q07157 1748 aa20.71■□□□□ 0.91
CHGA-201ENST00000216492 LINC00116Q8NCU8 138 aa20.71■□□□□ 0.91
CHGA-201ENST00000216492 K7ELQ4 463 aaPredicted RBP20.7■□□□□ 0.9
CHGA-201ENST00000216492 GPTP24298 496 aa20.7■□□□□ 0.9
CHGA-201ENST00000216492 FOXO4P98177 505 aa20.7■□□□□ 0.9
CHGA-201ENST00000216492 LMBR1LQ6UX01 489 aa20.7■□□□□ 0.9
CHGA-201ENST00000216492 KRT27Q7Z3Y8 459 aa20.7■□□□□ 0.9
CHGA-201ENST00000216492 OSBPL3Q9H4L5 887 aa20.7■□□□□ 0.9
CHGA-201ENST00000216492 PDE1AP54750 535 aa20.69■□□□□ 0.9
CHGA-201ENST00000216492 G3BP1Q13283 466 aaKnown RBP eCLIP20.69■□□□□ 0.9
CHGA-201ENST00000216492 RBM6P78332 1123 aaKnown RBP20.69■□□□□ 0.9
CHGA-201ENST00000216492 FAM196AQ6ZSG2 479 aa20.69■□□□□ 0.9
CHGA-201ENST00000216492 NLRP10Q86W26 655 aa20.69■□□□□ 0.9
CHGA-201ENST00000216492 ERC1Q8IUD2 1116 aa20.69■□□□□ 0.9
CHGA-201ENST00000216492 ZBTB38Q8NAP3 1195 aaPredicted RBP20.69■□□□□ 0.9
CHGA-201ENST00000216492 BCL11BQ9C0K0 894 aaPredicted RBP20.69■□□□□ 0.9
CHGA-201ENST00000216492 PCCAP05165 728 aaPredicted RBP20.68■□□□□ 0.9
CHGA-201ENST00000216492 FAM89AQ96GI7 184 aa20.68■□□□□ 0.9
CHGA-201ENST00000216492 NUP188Q5SRE5 1749 aa20.68■□□□□ 0.9
CHGA-201ENST00000216492 RABEP1Q15276 862 aa20.68■□□□□ 0.9
CHGA-201ENST00000216492 KLHDC4Q8TBB5 520 aa20.68■□□□□ 0.9
CHGA-201ENST00000216492 CCNL1Q9UK58 526 aaPredicted RBP20.68■□□□□ 0.9
CHGA-201ENST00000216492 MX1P20591 662 aa20.67■□□□□ 0.9
CHGA-201ENST00000216492 SALL3Q9BXA9 1300 aa20.66■□□□□ 0.9
CHGA-201ENST00000216492 RFX5P48382 616 aaPredicted RBP20.66■□□□□ 0.9
CHGA-201ENST00000216492 GBP4Q96PP9 640 aa20.66■□□□□ 0.9
CHGA-201ENST00000216492 SIL1Q9H173 461 aa20.66■□□□□ 0.9
CHGA-201ENST00000216492 COPRSQ9NQ92 184 aa20.66■□□□□ 0.9
CHGA-201ENST00000216492 CHMP3Q9Y3E7 222 aa20.66■□□□□ 0.9
CHGA-201ENST00000216492 PTPN12Q05209 780 aaKnown RBP20.66■□□□□ 0.9
CHGA-201ENST00000216492 NUTM1Q86Y26 1132 aa20.66■□□□□ 0.9
CHGA-201ENST00000216492 ZNF34Q8IZ26 560 aa20.66■□□□□ 0.9
CHGA-201ENST00000216492 CLASRPQ8N2M8 674 aaKnown RBP20.66■□□□□ 0.9
CHGA-201ENST00000216492 TRAK2O60296 914 aa20.65■□□□□ 0.9
CHGA-201ENST00000216492 CAMTA2O94983 1202 aa20.65■□□□□ 0.9
CHGA-201ENST00000216492 SDSP20132 328 aa20.65■□□□□ 0.9
CHGA-201ENST00000216492 PTMSP20962 102 aa20.65■□□□□ 0.9
CHGA-201ENST00000216492 RC3H1Q5TC82 1133 aaKnown RBP20.65■□□□□ 0.9
CHGA-201ENST00000216492 STAP2Q9UGK3 403 aa20.65■□□□□ 0.9
CHGA-201ENST00000216492 AFDNP55196 1824 aaKnown RBP20.65■□□□□ 0.9
CHGA-201ENST00000216492 CNTNAP4Q9C0A0 1308 aa20.65■□□□□ 0.9
CHGA-201ENST00000216492 SASH1O94885 1247 aa20.65■□□□□ 0.9
CHGA-201ENST00000216492 REC8O95072 547 aa20.64■□□□□ 0.89
CHGA-201ENST00000216492 RAB3GAP1Q15042 981 aa20.64■□□□□ 0.89
CHGA-201ENST00000216492 TSHZ3Q63HK5 1081 aa20.64■□□□□ 0.89
CHGA-201ENST00000216492 TRMT112Q9UI30 125 aaKnown RBP20.64■□□□□ 0.89
CHGA-201ENST00000216492 USP26Q9BXU7 913 aa20.63■□□□□ 0.89
CHGA-201ENST00000216492 SYNE4Q8N205 404 aa20.63■□□□□ 0.89
CHGA-201ENST00000216492 PLA2G12BQ9BX93 195 aa20.63■□□□□ 0.89
CHGA-201ENST00000216492 NHSQ6T4R5 1651 aa20.62■□□□□ 0.89
CHGA-201ENST00000216492 CD2BP2O95400 341 aaKnown RBP20.62■□□□□ 0.89
CHGA-201ENST00000216492 TNPO1Q92973 898 aaKnown RBP20.62■□□□□ 0.89
CHGA-201ENST00000216492 UBN2Q6ZU65 1347 aa20.62■□□□□ 0.89
CHGA-201ENST00000216492 CICQ96RK0 1608 aaPredicted RBP20.62■□□□□ 0.89
CHGA-201ENST00000216492 GOLGA6L3A6NEY3 463 aa20.62■□□□□ 0.89
CHGA-201ENST00000216492 RPS6KA4O75676 772 aa20.62■□□□□ 0.89
CHGA-201ENST00000216492 TRIM37O94972 964 aa20.61■□□□□ 0.89
CHGA-201ENST00000216492 CLEC4GQ6UXB4 293 aa20.61■□□□□ 0.89
CHGA-201ENST00000216492 ZNF652Q9Y2D9 606 aa20.61■□□□□ 0.89
CHGA-201ENST00000216492 MYH14Q7Z406 1995 aaKnown RBP20.61■□□□□ 0.89
CHGA-201ENST00000216492 CDHR2Q9BYE9 1310 aa20.61■□□□□ 0.89
CHGA-201ENST00000216492 BTAF1O14981 1849 aa20.61■□□□□ 0.89
CHGA-201ENST00000216492 ZNF831Q5JPB2 1677 aa20.6■□□□□ 0.89
CHGA-201ENST00000216492 RXRBP28702 533 aa20.6■□□□□ 0.89
CHGA-201ENST00000216492 IRS4O14654 1257 aaPredicted RBP20.6■□□□□ 0.89
CHGA-201ENST00000216492 CSF1RP07333 972 aa20.6■□□□□ 0.89
CHGA-201ENST00000216492 IFIT2P09913 472 aaKnown RBP20.6■□□□□ 0.89
CHGA-201ENST00000216492 SUSD4Q5VX71 490 aa20.6■□□□□ 0.89
CHGA-201ENST00000216492 NIP7Q9Y221 180 aaKnown RBP eCLIP20.6■□□□□ 0.89
CHGA-201ENST00000216492 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.6■□□□□ 0.89
CHGA-201ENST00000216492 GNPATO15228 680 aa20.59■□□□□ 0.89
CHGA-201ENST00000216492 CCDC57Q2TAC2 916 aa20.59■□□□□ 0.89
CHGA-201ENST00000216492 PARP10Q53GL7 1025 aa20.59■□□□□ 0.89
CHGA-201ENST00000216492 SMIM5Q71RC9 77 aa20.59■□□□□ 0.89
CHGA-201ENST00000216492 RTCBQ9Y3I0 505 aaKnown RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms