RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 ZNF330Q9Y3S2 320 aaPredicted RBP22.74■■□□□ 1.23
CTSA-201ENST00000191018 GLRX3O76003 335 aaKnown RBP22.73■■□□□ 1.23
CTSA-201ENST00000191018 LMBR1LQ6UX01 489 aa22.73■■□□□ 1.23
CTSA-201ENST00000191018 GIGYF2Q6Y7W6 1299 aaKnown RBP22.73■■□□□ 1.23
CTSA-201ENST00000191018 CERKQ8TCT0 537 aa22.73■■□□□ 1.23
CTSA-201ENST00000191018 EAF2Q96CJ1 260 aaPredicted RBP22.73■■□□□ 1.23
CTSA-201ENST00000191018 ACSBG1Q96GR2 724 aa22.73■■□□□ 1.23
CTSA-201ENST00000191018 ESYT1Q9BSJ8 1104 aa22.73■■□□□ 1.23
CTSA-201ENST00000191018 SIL1Q9H173 461 aa22.73■■□□□ 1.23
CTSA-201ENST00000191018 NUP98P52948 1817 aa22.73■■□□□ 1.23
CTSA-201ENST00000191018 IFIT2P09913 472 aaKnown RBP22.73■■□□□ 1.23
CTSA-201ENST00000191018 FAM98CQ17RN3 349 aaKnown RBP22.73■■□□□ 1.23
CTSA-201ENST00000191018 ECHDC1Q9NTX5 307 aa22.73■■□□□ 1.23
CTSA-201ENST00000191018 ZNF831Q5JPB2 1677 aa22.72■■□□□ 1.23
CTSA-201ENST00000191018 IL6STP40189 918 aaPredicted RBP22.72■■□□□ 1.23
CTSA-201ENST00000191018 AACSQ86V21 672 aa22.72■■□□□ 1.23
CTSA-201ENST00000191018 GPATCH3Q96I76 525 aa22.71■■□□□ 1.23
CTSA-201ENST00000191018 THSD7AQ9UPZ6 1657 aa22.7■■□□□ 1.22
CTSA-201ENST00000191018 CNTROBQ8N137 903 aa22.7■■□□□ 1.22
CTSA-201ENST00000191018 PCCAP05165 728 aaPredicted RBP22.69■■□□□ 1.22
CTSA-201ENST00000191018 HLFQ16534 295 aa22.69■■□□□ 1.22
CTSA-201ENST00000191018 COL5A3P25940 1745 aaPredicted RBP22.69■■□□□ 1.22
CTSA-201ENST00000191018 LOC102724428A0A0B4J2F2 783 aa22.68■■□□□ 1.22
CTSA-201ENST00000191018 SIK1P57059 783 aa22.68■■□□□ 1.22
CTSA-201ENST00000191018 HSP90AB3PQ58FF7 597 aa22.68■■□□□ 1.22
CTSA-201ENST00000191018 RTL5Q5HYW3 569 aaPredicted RBP22.68■■□□□ 1.22
CTSA-201ENST00000191018 ERVV-1B6SEH8 477 aa22.68■■□□□ 1.22
CTSA-201ENST00000191018 MAP4K4O95819 1239 aaPredicted RBP22.68■■□□□ 1.22
CTSA-201ENST00000191018 HSCBQ8IWL3 235 aa22.68■■□□□ 1.22
CTSA-201ENST00000191018 PLA2G12BQ9BX93 195 aa22.68■■□□□ 1.22
CTSA-201ENST00000191018 PALLDQ8WX93 1383 aa22.67■■□□□ 1.22
CTSA-201ENST00000191018 MYH14Q7Z406 1995 aaKnown RBP22.67■■□□□ 1.22
CTSA-201ENST00000191018 INTS5Q6P9B9 1019 aaKnown RBP22.67■■□□□ 1.22
CTSA-201ENST00000191018 CCDC8Q9H0W5 538 aaPredicted RBP22.67■■□□□ 1.22
CTSA-201ENST00000191018 ANTXR1Q9H6X2 564 aa22.67■■□□□ 1.22
CTSA-201ENST00000191018 USP21Q9UK80 565 aa22.67■■□□□ 1.22
CTSA-201ENST00000191018 ATP6V1AP38606 617 aa22.66■■□□□ 1.22
CTSA-201ENST00000191018 EIF5P55010 431 aaKnown RBP22.66■■□□□ 1.22
CTSA-201ENST00000191018 ZBTB38Q8NAP3 1195 aaPredicted RBP22.66■■□□□ 1.22
CTSA-201ENST00000191018 EPB41L2O43491 1005 aaKnown RBP22.66■■□□□ 1.22
CTSA-201ENST00000191018 KCNQ2O43526 872 aa22.66■■□□□ 1.22
CTSA-201ENST00000191018 SMARCC1Q92922 1105 aaPredicted RBP22.66■■□□□ 1.22
CTSA-201ENST00000191018 CCDC87Q9NVE4 849 aa22.66■■□□□ 1.22
CTSA-201ENST00000191018 TLR7Q9NYK1 1049 aaKnown RBP22.66■■□□□ 1.22
CTSA-201ENST00000191018 CDHR2Q9BYE9 1310 aa22.65■■□□□ 1.22
CTSA-201ENST00000191018 TFCP2Q12800 502 aa22.65■■□□□ 1.22
CTSA-201ENST00000191018 ITPK1Q13572 414 aa22.65■■□□□ 1.22
CTSA-201ENST00000191018 RABEP1Q15276 862 aa22.65■■□□□ 1.22
CTSA-201ENST00000191018 TNNI3KQ59H18 835 aa22.65■■□□□ 1.22
CTSA-201ENST00000191018 NLRP10Q86W26 655 aa22.65■■□□□ 1.22
CTSA-201ENST00000191018 DZIP3Q86Y13 1208 aaKnown RBP22.65■■□□□ 1.22
CTSA-201ENST00000191018 FPGT-TNNI3KV9GXZ4 949 aa22.65■■□□□ 1.22
CTSA-201ENST00000191018 A0A0G2JS52 829 aa22.64■■□□□ 1.22
CTSA-201ENST00000191018 CRKLP46109 303 aaKnown RBP22.64■■□□□ 1.22
CTSA-201ENST00000191018 ATG9AQ7Z3C6 839 aa22.64■■□□□ 1.22
CTSA-201ENST00000191018 ARXQ96QS3 562 aa22.64■■□□□ 1.22
CTSA-201ENST00000191018 MYH3P11055 1940 aa22.64■■□□□ 1.22
CTSA-201ENST00000191018 NBR1Q14596 966 aa22.64■■□□□ 1.21
CTSA-201ENST00000191018 CHMP3Q9Y3E7 222 aa22.64■■□□□ 1.21
CTSA-201ENST00000191018 FAM89AQ96GI7 184 aa22.63■■□□□ 1.21
CTSA-201ENST00000191018 IL25Q9H293 177 aa22.63■■□□□ 1.21
CTSA-201ENST00000191018 CD2BP2O95400 341 aaKnown RBP22.62■■□□□ 1.21
CTSA-201ENST00000191018 CSF1RP07333 972 aa22.62■■□□□ 1.21
CTSA-201ENST00000191018 EVI5LQ96CN4 794 aa22.62■■□□□ 1.21
CTSA-201ENST00000191018 SGSM2O43147 1006 aa22.62■■□□□ 1.21
CTSA-201ENST00000191018 SLKQ9H2G2 1235 aaPredicted RBP22.62■■□□□ 1.21
CTSA-201ENST00000191018 DBNLQ9UJU6 430 aaKnown RBP22.62■■□□□ 1.21
CTSA-201ENST00000191018 TBC1D2BQ9UPU7 963 aa22.62■■□□□ 1.21
CTSA-201ENST00000191018 CIAO1O76071 339 aa22.61■■□□□ 1.21
CTSA-201ENST00000191018 GPTP24298 496 aa22.61■■□□□ 1.21
CTSA-201ENST00000191018 IL15P40933 162 aaPredicted RBP22.61■■□□□ 1.21
CTSA-201ENST00000191018 GPR108Q9NPR9 543 aa22.61■■□□□ 1.21
CTSA-201ENST00000191018 NHSQ6T4R5 1651 aa22.6■■□□□ 1.21
CTSA-201ENST00000191018 EYA2O00167 538 aa22.6■■□□□ 1.21
CTSA-201ENST00000191018 ZNF34Q8IZ26 560 aa22.6■■□□□ 1.21
CTSA-201ENST00000191018 IL17RAQ96F46 866 aa22.6■■□□□ 1.21
CTSA-201ENST00000191018 ANO2Q9NQ90 1003 aa22.6■■□□□ 1.21
CTSA-201ENST00000191018 HSPA1LP34931 641 aa22.6■■□□□ 1.21
CTSA-201ENST00000191018 FBXO3Q9UK99 471 aa22.6■■□□□ 1.21
CTSA-201ENST00000191018 BTAF1O14981 1849 aa22.59■■□□□ 1.21
CTSA-201ENST00000191018 UBN2Q6ZU65 1347 aa22.59■■□□□ 1.21
CTSA-201ENST00000191018 K7ELQ4 463 aaPredicted RBP22.58■■□□□ 1.21
CTSA-201ENST00000191018 ATP5JP18859 108 aa22.58■■□□□ 1.21
CTSA-201ENST00000191018 BCORQ6W2J9 1755 aa22.58■■□□□ 1.21
CTSA-201ENST00000191018 ANAPC15P60006 121 aa22.58■■□□□ 1.2
CTSA-201ENST00000191018 CCDC57Q2TAC2 916 aa22.58■■□□□ 1.2
CTSA-201ENST00000191018 LRRC24Q50LG9 513 aa22.58■■□□□ 1.2
CTSA-201ENST00000191018 AEBP2Q6ZN18 517 aaPredicted RBP22.58■■□□□ 1.2
CTSA-201ENST00000191018 ZNF594Q96JF6 807 aaPredicted RBP22.58■■□□□ 1.2
CTSA-201ENST00000191018 SYNE4Q8N205 404 aa22.57■■□□□ 1.2
CTSA-201ENST00000191018 BOLA2Q9H3K6 86 aa22.57■■□□□ 1.2
CTSA-201ENST00000191018 MCCP23508 829 aa22.56■■□□□ 1.2
CTSA-201ENST00000191018 GJD4Q96KN9 370 aaPredicted RBP22.56■■□□□ 1.2
CTSA-201ENST00000191018 DBNDD2Q9BQY9 259 aa22.56■■□□□ 1.2
CTSA-201ENST00000191018 CAMTA2O94983 1202 aa22.56■■□□□ 1.2
CTSA-201ENST00000191018 NFKBIBQ15653 356 aa22.56■■□□□ 1.2
CTSA-201ENST00000191018 CWC27Q6UX04 472 aaKnown RBP22.56■■□□□ 1.2
CTSA-201ENST00000191018 RUFY2Q8WXA3 655 aa22.56■■□□□ 1.2
CTSA-201ENST00000191018 DIAPH3Q9NSV4 1193 aa22.56■■□□□ 1.2
CTSA-201ENST00000191018 RAD50Q92878 1312 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms