RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 MICU1Q9BPX6 476 aa11.14□□□□□ -0.63
RBFOX1-224ENST00000641259 SUV39H2Q9H5I1 410 aa11.14□□□□□ -0.63
RBFOX1-224ENST00000641259 EVA1AQ9H8M9 152 aa11.14□□□□□ -0.63
RBFOX1-224ENST00000641259 CD84Q9UIB8 345 aa11.14□□□□□ -0.63
RBFOX1-224ENST00000641259 CRLS1Q9UJA2 301 aa11.14□□□□□ -0.63
RBFOX1-224ENST00000641259 KIF26AQ9ULI4 1882 aaPredicted RBP11.14□□□□□ -0.63
RBFOX1-224ENST00000641259 UBE2QL1A1L167 161 aa11.14□□□□□ -0.63
RBFOX1-224ENST00000641259 SULT1B1O43704 296 aa11.14□□□□□ -0.63
RBFOX1-224ENST00000641259 NME6O75414 186 aaPredicted RBP11.14□□□□□ -0.63
RBFOX1-224ENST00000641259 IFNW1P05000 195 aa11.14□□□□□ -0.63
RBFOX1-224ENST00000641259 PAICSP22234 425 aaKnown RBP11.14□□□□□ -0.63
RBFOX1-224ENST00000641259 FCARP24071 287 aa11.14□□□□□ -0.63
RBFOX1-224ENST00000641259 HK3P52790 923 aa11.14□□□□□ -0.63
RBFOX1-224ENST00000641259 HTR4Q13639 388 aa11.14□□□□□ -0.63
RBFOX1-224ENST00000641259 SEC23BQ15437 767 aa11.14□□□□□ -0.63
RBFOX1-224ENST00000641259 CHRNA6Q15825 494 aa11.14□□□□□ -0.63
RBFOX1-224ENST00000641259 DCST1Q5T197 706 aa11.14□□□□□ -0.63
RBFOX1-224ENST00000641259 FAM27D1Q5T7N8 215 aa11.14□□□□□ -0.63
RBFOX1-224ENST00000641259 RAB11FIP2Q7L804 512 aa11.14□□□□□ -0.63
RBFOX1-224ENST00000641259 TRMT11Q7Z4G4 463 aaKnown RBP11.14□□□□□ -0.63
RBFOX1-224ENST00000641259 SERPINA9Q86WD7 417 aa11.14□□□□□ -0.63
RBFOX1-224ENST00000641259 SIAH3Q8IW03 269 aa11.14□□□□□ -0.63
RBFOX1-224ENST00000641259 UCN3Q969E3 161 aa11.14□□□□□ -0.63
RBFOX1-224ENST00000641259 APIPQ96GX9 242 aa11.14□□□□□ -0.63
RBFOX1-224ENST00000641259 DPYSL5Q9BPU6 564 aa11.14□□□□□ -0.63
RBFOX1-224ENST00000641259 DPH7Q9BTV6 452 aa11.14□□□□□ -0.63
RBFOX1-224ENST00000641259 FAIM2Q9BWQ8 316 aa11.14□□□□□ -0.63
RBFOX1-224ENST00000641259 XKR8Q9H6D3 395 aa11.14□□□□□ -0.63
RBFOX1-224ENST00000641259 NMNAT1Q9HAN9 279 aaPredicted RBP11.14□□□□□ -0.63
RBFOX1-224ENST00000641259 RASD1Q9Y272 281 aa11.14□□□□□ -0.63
RBFOX1-224ENST00000641259 GPR171O14626 319 aa11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 BET1O15155 118 aa11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 SLC25A14O95258 325 aaPredicted RBP11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 EBLN1P0CF75 366 aa11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 ADH5P11766 374 aa11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 ZNF35P13682 527 aa11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 APEHP13798 732 aaKnown RBP11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 ACVR1BP36896 505 aa11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 TTPAP49638 278 aa11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 AGFG1P52594 562 aaKnown RBP11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 IRF8Q02556 426 aa11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 CACNG1Q06432 222 aa11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 CPTPQ5TA50 214 aa11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 HSDL2Q6YN16 418 aa11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 BTN2A2Q8WVV5 523 aa11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 CREB3L1Q96BA8 519 aa11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 MS4A3Q96HJ5 214 aa11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 HYKKA2RU49 373 aa11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 ZNF197O14709 1029 aa11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 YKT6O15498 198 aa11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 LEFTY1O75610 366 aa11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 PDYNP01213 254 aa11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 RPS17P08708 135 aaKnown RBP11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 CD63P08962 238 aa11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 C1SP09871 688 aa11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 LAMP1P11279 417 aa11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 HLA-EP13747 358 aa11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 ZNF3P17036 446 aa11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 CRB2Q5IJ48 1285 aa11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 IKBIPQ70UQ0 350 aa11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 CCDC36Q8IYA8 594 aa11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 CHFRQ96EP1 664 aa11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 SLC38A2Q96QD8 506 aa11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 KCNH6Q9H252 994 aa11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 ASB8Q9H765 288 aa11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 UNKLQ9H9P5 680 aaKnown RBP11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 FKBP7Q9Y680 259 aa11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 TCF20Q9UGU0 1960 aaKnown RBP11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 ARNTLO00327 626 aa11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 WNT9AO14904 365 aa11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 CSN2P05814 226 aa11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 PTBP1P26599 531 aaKnown RBP eCLIP11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 CRYBB2P43320 205 aa11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 RAB13P51153 203 aa11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 ST3GAL2Q16842 350 aa11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 TMED4Q7Z7H5 227 aa11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 RAB8BQ92930 207 aa11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 ELP4Q96EB1 424 aa11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 C7orf34Q96L11 122 aa11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 ZNF382Q96SR6 550 aa11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 SECISBP2Q96T21 854 aaKnown RBP11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 CPPED1Q9BRF8 314 aaPredicted RBP11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 DOHHQ9BU89 302 aa11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 POPDC3Q9HBV1 291 aa11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 B4GALT6Q9UBX8 382 aa11.13□□□□□ -0.63
RBFOX1-224ENST00000641259 KIAA1549LQ6ZVL6 1849 aa11.12□□□□□ -0.63
RBFOX1-224ENST00000641259 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.12□□□□□ -0.63
RBFOX1-224ENST00000641259 KHNYNO15037 678 aaKnown RBP11.12□□□□□ -0.63
RBFOX1-224ENST00000641259 SERPIND1P05546 499 aa11.12□□□□□ -0.63
RBFOX1-224ENST00000641259 SPP1P10451 314 aa11.12□□□□□ -0.63
RBFOX1-224ENST00000641259 GMFBP60983 142 aa11.12□□□□□ -0.63
RBFOX1-224ENST00000641259 B4GALNT1Q00973 533 aa11.12□□□□□ -0.63
RBFOX1-224ENST00000641259 ARSIQ5FYB1 569 aa11.12□□□□□ -0.63
RBFOX1-224ENST00000641259 ETFBKMTQ8IXQ9 262 aa11.12□□□□□ -0.63
RBFOX1-224ENST00000641259 OR4F15Q8NGB8 312 aa11.12□□□□□ -0.63
RBFOX1-224ENST00000641259 DNAJA3Q96EY1 480 aa11.12□□□□□ -0.63
RBFOX1-224ENST00000641259 LYSMD1Q96S90 227 aa11.12□□□□□ -0.63
RBFOX1-224ENST00000641259 PINK1Q9BXM7 581 aa11.12□□□□□ -0.63
RBFOX1-224ENST00000641259 CPEB1Q9BZB8 566 aaKnown RBP11.12□□□□□ -0.63
RBFOX1-224ENST00000641259 BRD9Q9H8M2 597 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms