RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 GRHL3Q8TE85 626 aa13.64□□□□□ -0.23
SCARB2-221ENST00000640341 ELP4Q96EB1 424 aa13.64□□□□□ -0.23
SCARB2-221ENST00000640341 ENKD1Q9H0I2 346 aa13.64□□□□□ -0.23
SCARB2-221ENST00000640341 IRF2BPLQ9H1B7 796 aa13.64□□□□□ -0.23
SCARB2-221ENST00000640341 BEX1Q9HBH7 125 aa13.64□□□□□ -0.23
SCARB2-221ENST00000640341 APOBEC3BQ9UH17 382 aaKnown RBP13.64□□□□□ -0.23
SCARB2-221ENST00000640341 ASB4Q9Y574 426 aa13.64□□□□□ -0.23
SCARB2-221ENST00000640341 ALPK2Q86TB3 2170 aa13.64□□□□□ -0.23
SCARB2-221ENST00000640341 EMC8O43402 210 aa13.64□□□□□ -0.23
SCARB2-221ENST00000640341 TIMP1P01033 207 aa13.64□□□□□ -0.23
SCARB2-221ENST00000640341 MNX1P50219 401 aaPredicted RBP13.64□□□□□ -0.23
SCARB2-221ENST00000640341 OR10A3P58181 314 aa13.64□□□□□ -0.23
SCARB2-221ENST00000640341 SRP54P61011 504 aaKnown RBP13.64□□□□□ -0.23
SCARB2-221ENST00000640341 BTBD16Q32M84 506 aa13.64□□□□□ -0.23
SCARB2-221ENST00000640341 ZNF628Q5EBL2 1059 aa13.64□□□□□ -0.23
SCARB2-221ENST00000640341 CXXC5Q7LFL8 322 aaKnown RBP13.64□□□□□ -0.23
SCARB2-221ENST00000640341 GDF7Q7Z4P5 450 aa13.64□□□□□ -0.23
SCARB2-221ENST00000640341 OR51L1Q8NGJ5 315 aa13.64□□□□□ -0.23
SCARB2-221ENST00000640341 OR10G6Q8NH81 332 aa13.64□□□□□ -0.23
SCARB2-221ENST00000640341 SLC35A4Q96G79 324 aa13.64□□□□□ -0.23
SCARB2-221ENST00000640341 ATF6BQ99941 703 aa13.64□□□□□ -0.23
SCARB2-221ENST00000640341 PRDM7Q9NQW5 492 aa13.64□□□□□ -0.23
SCARB2-221ENST00000640341 TEKT2Q9UIF3 430 aa13.64□□□□□ -0.23
SCARB2-221ENST00000640341 CACNA1CQ13936 2221 aa13.64□□□□□ -0.23
SCARB2-221ENST00000640341 NOTOA8MTQ0 251 aa13.64□□□□□ -0.23
SCARB2-221ENST00000640341 DNAJB6O75190 326 aa13.64□□□□□ -0.23
SCARB2-221ENST00000640341 ZIC2O95409 532 aaPredicted RBP13.64□□□□□ -0.23
SCARB2-221ENST00000640341 NFATC1O95644 943 aa13.64□□□□□ -0.23
SCARB2-221ENST00000640341 CLUP10909 449 aa13.64□□□□□ -0.23
SCARB2-221ENST00000640341 SPTBP11277 2137 aa13.64□□□□□ -0.23
SCARB2-221ENST00000640341 ELK1P19419 428 aa13.64□□□□□ -0.23
SCARB2-221ENST00000640341 SHC1P29353 583 aa13.64□□□□□ -0.23
SCARB2-221ENST00000640341 OMPP47874 163 aa13.64□□□□□ -0.23
SCARB2-221ENST00000640341 FIGNL1Q6PIW4 674 aa13.64□□□□□ -0.23
SCARB2-221ENST00000640341 ETFBKMTQ8IXQ9 262 aa13.64□□□□□ -0.23
SCARB2-221ENST00000640341 OR2T33Q8NG76 320 aa13.64□□□□□ -0.23
SCARB2-221ENST00000640341 OR56A1Q8NGH5 318 aa13.64□□□□□ -0.23
SCARB2-221ENST00000640341 PFN4Q8NHR9 129 aa13.64□□□□□ -0.23
SCARB2-221ENST00000640341 SPPL3Q8TCT6 385 aa13.64□□□□□ -0.23
SCARB2-221ENST00000640341 HCAR2Q8TDS4 363 aa13.64□□□□□ -0.23
SCARB2-221ENST00000640341 CHFRQ96EP1 664 aa13.64□□□□□ -0.23
SCARB2-221ENST00000640341 COX14Q96I36 57 aa13.64□□□□□ -0.23
SCARB2-221ENST00000640341 HCAR1Q9BXC0 346 aa13.64□□□□□ -0.23
SCARB2-221ENST00000640341 CHST2Q9Y4C5 530 aa13.64□□□□□ -0.23
SCARB2-221ENST00000640341 DAPL1A0PJW8 107 aa13.63□□□□□ -0.23
SCARB2-221ENST00000640341 SURF4O15260 269 aa13.63□□□□□ -0.23
SCARB2-221ENST00000640341 FGF19O95750 216 aa13.63□□□□□ -0.23
SCARB2-221ENST00000640341 LINC00271P0C7V0 271 aa13.63□□□□□ -0.23
SCARB2-221ENST00000640341 AK4P27144 223 aaPredicted RBP13.63□□□□□ -0.23
SCARB2-221ENST00000640341 DRD3P35462 400 aa13.63□□□□□ -0.23
SCARB2-221ENST00000640341 SRP9P49458 86 aaKnown RBP13.63□□□□□ -0.23
SCARB2-221ENST00000640341 VEGFBP49765 207 aa13.63□□□□□ -0.23
SCARB2-221ENST00000640341 MRPL28Q13084 256 aaKnown RBP13.63□□□□□ -0.23
SCARB2-221ENST00000640341 PGGHGQ32M88 737 aa13.63□□□□□ -0.23
SCARB2-221ENST00000640341 RDH10Q8IZV5 341 aa13.63□□□□□ -0.23
SCARB2-221ENST00000640341 OR7G2Q8NG99 324 aa13.63□□□□□ -0.23
SCARB2-221ENST00000640341 DIO2Q92813 273 aa13.63□□□□□ -0.23
SCARB2-221ENST00000640341 ZFP3Q96NJ6 502 aa13.63□□□□□ -0.23
SCARB2-221ENST00000640341 MAT2BQ9NZL9 334 aa13.63□□□□□ -0.23
SCARB2-221ENST00000640341 CA5BQ9Y2D0 317 aa13.63□□□□□ -0.23
SCARB2-221ENST00000640341 LRRK1Q38SD2 2015 aa13.63□□□□□ -0.23
SCARB2-221ENST00000640341 ARHGEF9O43307 516 aa13.63□□□□□ -0.23
SCARB2-221ENST00000640341 TBXA2RP21731 343 aa13.63□□□□□ -0.23
SCARB2-221ENST00000640341 NOS3P29474 1203 aa13.63□□□□□ -0.23
SCARB2-221ENST00000640341 RPS5P46782 204 aaKnown RBP13.63□□□□□ -0.23
SCARB2-221ENST00000640341 EFR3AQ14156 821 aa13.63□□□□□ -0.23
SCARB2-221ENST00000640341 TMEM99Q8N816 258 aa13.63□□□□□ -0.23
SCARB2-221ENST00000640341 SLC37A3Q8NCC5 494 aa13.63□□□□□ -0.23
SCARB2-221ENST00000640341 OR2L5Q8NG80 312 aa13.63□□□□□ -0.23
SCARB2-221ENST00000640341 OSTF1Q92882 214 aa13.63□□□□□ -0.23
SCARB2-221ENST00000640341 BTBD1Q9H0C5 482 aa13.63□□□□□ -0.23
SCARB2-221ENST00000640341 RBFOX1Q9NWB1 397 aaKnown RBP13.63□□□□□ -0.23
SCARB2-221ENST00000640341 SIRT4Q9Y6E7 314 aaPredicted RBP13.63□□□□□ -0.23
SCARB2-221ENST00000640341 MAU2Q9Y6X3 613 aa13.63□□□□□ -0.23
SCARB2-221ENST00000640341 SDK1Q7Z5N4 2213 aa13.63□□□□□ -0.23
SCARB2-221ENST00000640341 LRRC72A6NJI9 287 aa13.62□□□□□ -0.23
SCARB2-221ENST00000640341 J3QLW9 94 aa13.62□□□□□ -0.23
SCARB2-221ENST00000640341 STK25O00506 426 aa13.62□□□□□ -0.23
SCARB2-221ENST00000640341 EEF1E1O43324 174 aaKnown RBP13.62□□□□□ -0.23
SCARB2-221ENST00000640341 LANCL1O43813 399 aa13.62□□□□□ -0.23
SCARB2-221ENST00000640341 THY1P04216 161 aa13.62□□□□□ -0.23
SCARB2-221ENST00000640341 ZNF888P0CJ79 500 aaPredicted RBP13.62□□□□□ -0.23
SCARB2-221ENST00000640341 ZNF19P17023 458 aa13.62□□□□□ -0.23
SCARB2-221ENST00000640341 NDUFV2P19404 249 aa13.62□□□□□ -0.23
SCARB2-221ENST00000640341 HSD17B2P37059 387 aa13.62□□□□□ -0.23
SCARB2-221ENST00000640341 SLC48A1Q6P1K1 146 aa13.62□□□□□ -0.23
SCARB2-221ENST00000640341 RASSF6Q6ZTQ3 369 aa13.62□□□□□ -0.23
SCARB2-221ENST00000640341 OR2L3Q8NG85 312 aa13.62□□□□□ -0.23
SCARB2-221ENST00000640341 ACOT11Q8WXI4 607 aaPredicted RBP13.62□□□□□ -0.23
SCARB2-221ENST00000640341 SNAPC3Q92966 411 aa13.62□□□□□ -0.23
SCARB2-221ENST00000640341 IFT27Q9BW83 186 aa13.62□□□□□ -0.23
SCARB2-221ENST00000640341 FBXL4Q9UKA2 621 aa13.62□□□□□ -0.23
SCARB2-221ENST00000640341 INMT-MINDY4F8WBC2 141 aa13.62□□□□□ -0.23
SCARB2-221ENST00000640341 CASC3O15234 703 aaKnown RBP13.62□□□□□ -0.23
SCARB2-221ENST00000640341 LDB3O75112 727 aa13.62□□□□□ -0.23
SCARB2-221ENST00000640341 F3P13726 295 aa13.62□□□□□ -0.23
SCARB2-221ENST00000640341 BMP7P18075 431 aa13.62□□□□□ -0.23
SCARB2-221ENST00000640341 EVI2BP34910 448 aa13.62□□□□□ -0.23
SCARB2-221ENST00000640341 TALDO1P37837 337 aa13.62□□□□□ -0.23
SCARB2-221ENST00000640341 ZNF155Q12901 538 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms