RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 RAB3IPQ96QF0 476 aaPredicted RBP2.97□□□□□ -1.93
CCDC7-213ENST00000639290 PLK3Q9H4B4 646 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 SERHL2Q9H4I8 314 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 RANBP3Q9H6Z4 567 aaPredicted RBP2.97□□□□□ -1.93
CCDC7-213ENST00000639290 ZNF665Q9H7R5 613 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 ZBTB26Q9HCK0 441 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 SEMA4BQ9NPR2 832 aaPredicted RBP2.97□□□□□ -1.93
CCDC7-213ENST00000639290 RAB20Q9NX57 234 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 PPP1R14DQ9NXH3 145 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 SMARCAL1Q9NZC9 954 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 CNOT11Q9UKZ1 510 aaKnown RBP2.97□□□□□ -1.93
CCDC7-213ENST00000639290 COQ4Q9Y3A0 265 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 MMACHCQ9Y4U1 282 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 LRP1BQ9NZR2 4599 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 A0A0G2JLM5 398 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 C1orf232A0A0U1RR37 186 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 A0A1W2PQ09 198 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 TMEM233B4DJY2 109 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 ZBTB14O43829 449 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 GPR137BO60478 399 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 PFKFB2O60825 505 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 COQ9O75208 318 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 OR2J2O76002 312 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 CLDN7O95471 211 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 CLIC3O95833 236 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 AMY1AP04745 511 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 RPN2P04844 631 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 TCF4P15884 667 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 DDCP20711 480 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 GP5P40197 560 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 BUD31P41223 144 aaPredicted RBP2.97□□□□□ -1.93
CCDC7-213ENST00000639290 XCR1P46094 333 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 POLR2FP61218 127 aaKnown RBP2.97□□□□□ -1.93
CCDC7-213ENST00000639290 GBE1Q04446 702 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 LRRC74AQ0VAA2 488 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 DBPQ10586 325 aaPredicted RBP2.97□□□□□ -1.93
CCDC7-213ENST00000639290 ITGA9Q13797 1035 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 ZRSR1Q15695 479 aaKnown RBP2.97□□□□□ -1.93
CCDC7-213ENST00000639290 PIGGQ5H8A4 983 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 DCST1Q5T197 706 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 CDPF1Q6NVV7 123 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 Q6ZSV7 163 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 PIWIL3Q7Z3Z3 882 aaKnown RBP2.97□□□□□ -1.93
CCDC7-213ENST00000639290 MED12LQ86YW9 2145 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 RFX6Q8HWS3 928 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 WDTC1Q8N5D0 677 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 HSPH1Q92598 858 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 FAM162AQ96A26 154 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 MUCL1Q96DR8 90 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 MOGAT1Q96PD6 335 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 PANX2Q96RD6 677 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 THUMPD3Q9BV44 507 aaKnown RBP2.97□□□□□ -1.93
CCDC7-213ENST00000639290 TMEM165Q9HC07 324 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 MARCH4Q9P2E8 410 aaPredicted RBP2.97□□□□□ -1.93
CCDC7-213ENST00000639290 XPR1Q9UBH6 696 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 POU2F3Q9UKI9 436 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 RUVBL1Q9Y265 456 aaKnown RBP2.97□□□□□ -1.93
CCDC7-213ENST00000639290 TSC22D4Q9Y3Q8 395 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 RNF213Q63HN8 5207 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 A0A0U1RQK1 487 aa2.96□□□□□ -1.93
CCDC7-213ENST00000639290 ZNF320A2RRD8 509 aa2.96□□□□□ -1.93
CCDC7-213ENST00000639290 FAM90A18PA6NE21 464 aa2.96□□□□□ -1.93
CCDC7-213ENST00000639290 FAM90A16PA6NEW6 464 aa2.96□□□□□ -1.93
CCDC7-213ENST00000639290 FAM90A9PA6NNJ1 464 aa2.96□□□□□ -1.93
CCDC7-213ENST00000639290 KRTAP29-1A8MX34 341 aaPredicted RBP2.96□□□□□ -1.93
CCDC7-213ENST00000639290 CAPN14A8MX76 684 aa2.96□□□□□ -1.93
CCDC7-213ENST00000639290 FAM90A5PA8MXJ8 464 aa2.96□□□□□ -1.93
CCDC7-213ENST00000639290 GFYI3L273 518 aa2.96□□□□□ -1.93
CCDC7-213ENST00000639290 MYO1CO00159 1063 aa2.96□□□□□ -1.93
CCDC7-213ENST00000639290 RAMP1O60894 148 aa2.96□□□□□ -1.93
CCDC7-213ENST00000639290 KERAO60938 352 aa2.96□□□□□ -1.93
CCDC7-213ENST00000639290 AVILO75366 819 aa2.96□□□□□ -1.93
CCDC7-213ENST00000639290 SEC22BO75396 215 aa2.96□□□□□ -1.93
CCDC7-213ENST00000639290 GCM2O75603 506 aaPredicted RBP2.96□□□□□ -1.93
CCDC7-213ENST00000639290 LTA4HP09960 611 aaKnown RBP2.96□□□□□ -1.93
CCDC7-213ENST00000639290 FAM90A15PP0C7V4 464 aa2.96□□□□□ -1.93
CCDC7-213ENST00000639290 FAM90A14PP0C7W9 464 aa2.96□□□□□ -1.93
CCDC7-213ENST00000639290 ARL1P40616 181 aaPredicted RBP2.96□□□□□ -1.93
CCDC7-213ENST00000639290 GRIA3P42263 894 aa2.96□□□□□ -1.93
CCDC7-213ENST00000639290 ETV4P43268 484 aa2.96□□□□□ -1.93
CCDC7-213ENST00000639290 STARP49675 285 aa2.96□□□□□ -1.93
CCDC7-213ENST00000639290 GPR143P51810 404 aa2.96□□□□□ -1.93
CCDC7-213ENST00000639290 CLDN15P56746 228 aa2.96□□□□□ -1.93
CCDC7-213ENST00000639290 CTXN1P60606 82 aa2.96□□□□□ -1.93
CCDC7-213ENST00000639290 PHKG1Q16816 387 aa2.96□□□□□ -1.93
CCDC7-213ENST00000639290 ANKDD1AQ495B1 522 aa2.96□□□□□ -1.93
CCDC7-213ENST00000639290 KLF17Q5JT82 389 aaPredicted RBP2.96□□□□□ -1.93
CCDC7-213ENST00000639290 LIPMQ5VYY2 423 aa2.96□□□□□ -1.93
CCDC7-213ENST00000639290 TIGD3Q6B0B8 471 aa2.96□□□□□ -1.93
CCDC7-213ENST00000639290 KRT80Q6KB66 452 aa2.96□□□□□ -1.93
CCDC7-213ENST00000639290 WDR73Q6P4I2 378 aa2.96□□□□□ -1.93
CCDC7-213ENST00000639290 SBSNQ6UWP8 590 aa2.96□□□□□ -1.93
CCDC7-213ENST00000639290 C5orf24Q7Z6I8 188 aa2.96□□□□□ -1.93
CCDC7-213ENST00000639290 LDLRAD3Q86YD5 345 aa2.96□□□□□ -1.93
CCDC7-213ENST00000639290 MCOLN2Q8IZK6 566 aa2.96□□□□□ -1.93
CCDC7-213ENST00000639290 PQLC1Q8N2U9 271 aa2.96□□□□□ -1.93
CCDC7-213ENST00000639290 LILRA3Q8N6C8 439 aaPredicted RBP2.96□□□□□ -1.93
CCDC7-213ENST00000639290 MORN4Q8NDC4 146 aa2.96□□□□□ -1.93
CCDC7-213ENST00000639290 OR9A4Q8NGU2 314 aa2.96□□□□□ -1.93
CCDC7-213ENST00000639290 OR5K2Q8NHB8 316 aa2.96□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms