RNA–Protein interactions for RNA: ENST00000639002.1

CD44-239, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 528 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-239ENST00000639002 IGHV7-81A0A0B4J1V7 117 aa2.17□□□□□ -2.06
CD44-239ENST00000639002 KIR2DL5BA0A0G2JN68 375 aa2.17□□□□□ -2.06
CD44-239ENST00000639002 KIR2DL5BA0A0G2JPC4 375 aa2.17□□□□□ -2.06
CD44-239ENST00000639002 ZNF320A2RRD8 509 aa2.17□□□□□ -2.06
CD44-239ENST00000639002 SAGE2PA6NJ88 616 aa2.17□□□□□ -2.06
CD44-239ENST00000639002 C19orf81C9J6K1 198 aa2.17□□□□□ -2.06
CD44-239ENST00000639002 BUB1O43683 1085 aa2.17□□□□□ -2.06
CD44-239ENST00000639002 NME2P1O60361 137 aa2.17□□□□□ -2.06
CD44-239ENST00000639002 ICOSLGO75144 302 aa2.17□□□□□ -2.06
CD44-239ENST00000639002 SYNGR4O95473 234 aa2.17□□□□□ -2.06
CD44-239ENST00000639002 JCHAINP01591 159 aa2.17□□□□□ -2.06
CD44-239ENST00000639002 CHRNA1P02708 482 aa2.17□□□□□ -2.06
CD44-239ENST00000639002 IGHV4-34P06331 123 aa2.17□□□□□ -2.06
CD44-239ENST00000639002 CD55P08174 381 aa2.17□□□□□ -2.06
CD44-239ENST00000639002 ZNF823P16415 610 aa2.17□□□□□ -2.06
CD44-239ENST00000639002 FERP16591 822 aa2.17□□□□□ -2.06
CD44-239ENST00000639002 ADORA2BP29275 332 aa2.17□□□□□ -2.06
CD44-239ENST00000639002 ATP5DP30049 168 aa2.17□□□□□ -2.06
CD44-239ENST00000639002 CTNNA1P35221 906 aaKnown RBP2.17□□□□□ -2.06
CD44-239ENST00000639002 BTDP43251 543 aa2.17□□□□□ -2.06
CD44-239ENST00000639002 LHX2P50458 406 aa2.17□□□□□ -2.06
CD44-239ENST00000639002 CCZ1BP86790 482 aa2.17□□□□□ -2.06
CD44-239ENST00000639002 CCZ1P86791 482 aaPredicted RBP2.17□□□□□ -2.06
CD44-239ENST00000639002 ZNF154Q13106 437 aa2.17□□□□□ -2.06
CD44-239ENST00000639002 ACSF3Q4G176 576 aaPredicted RBP2.17□□□□□ -2.06
CD44-239ENST00000639002 IQCA1Q86XH1 822 aa2.17□□□□□ -2.06
CD44-239ENST00000639002 SERPINA12Q8IW75 414 aa2.17□□□□□ -2.06
CD44-239ENST00000639002 KIR2DL5AQ8N109 375 aa2.17□□□□□ -2.06
CD44-239ENST00000639002 CNPY4Q8N129 248 aa2.17□□□□□ -2.06
CD44-239ENST00000639002 COLGALT1Q8NBJ5 622 aa2.17□□□□□ -2.06
CD44-239ENST00000639002 MDS2Q8NDY4 140 aa2.17□□□□□ -2.06
CD44-239ENST00000639002 GDAP1Q8TB36 358 aa2.17□□□□□ -2.06
CD44-239ENST00000639002 BLOC1S5Q8TDH9 187 aa2.17□□□□□ -2.06
CD44-239ENST00000639002 TRPV6Q9H1D0 765 aa2.17□□□□□ -2.06
CD44-239ENST00000639002 AKAP7Q9P0M2 348 aaPredicted RBP2.17□□□□□ -2.06
CD44-239ENST00000639002 EXOSC1Q9Y3B2 195 aaKnown RBP2.17□□□□□ -2.06
CD44-239ENST00000639002 CDH10Q9Y6N8 788 aa2.17□□□□□ -2.06
CD44-239ENST00000639002 IGHV1OR15-1A0A075B7D0 117 aa2.16□□□□□ -2.06
CD44-239ENST00000639002 BICDL2A1A5D9 508 aa2.16□□□□□ -2.06
CD44-239ENST00000639002 H0Y626 953 aa2.16□□□□□ -2.06
CD44-239ENST00000639002 ZNF263O14978 683 aa2.16□□□□□ -2.06
CD44-239ENST00000639002 SLC7A4O43246 635 aa2.16□□□□□ -2.06
CD44-239ENST00000639002 MAGP20916 626 aa2.16□□□□□ -2.06
CD44-239ENST00000639002 UGT1A5P35504 534 aa2.16□□□□□ -2.06
CD44-239ENST00000639002 RPL29P47914 159 aaKnown RBP2.16□□□□□ -2.06
CD44-239ENST00000639002 MOBPQ13875 183 aa2.16□□□□□ -2.06
CD44-239ENST00000639002 KRTAP21-2Q3LI59 83 aa2.16□□□□□ -2.06
CD44-239ENST00000639002 PRAMEF7Q5VXH5 474 aa2.16□□□□□ -2.06
CD44-239ENST00000639002 LEG1Q6P5S2 330 aa2.16□□□□□ -2.06
CD44-239ENST00000639002 YRDCQ86U90 279 aaKnown RBP2.16□□□□□ -2.06
CD44-239ENST00000639002 SERPINA9Q86WD7 417 aa2.16□□□□□ -2.06
CD44-239ENST00000639002 CENPSQ8N2Z9 138 aa2.16□□□□□ -2.06
CD44-239ENST00000639002 OR2AP1Q8NGE2 309 aa2.16□□□□□ -2.06
CD44-239ENST00000639002 PSMA8Q8TAA3 256 aa2.16□□□□□ -2.06
CD44-239ENST00000639002 SLC17A9Q9BYT1 436 aa2.16□□□□□ -2.06
CD44-239ENST00000639002 FANCFQ9NPI8 374 aa2.16□□□□□ -2.06
CD44-239ENST00000639002 DUS2Q9NX74 493 aaKnown RBP2.16□□□□□ -2.06
CD44-239ENST00000639002 FBXW2Q9UKT8 454 aa2.16□□□□□ -2.06
CD44-239ENST00000639002 FZR1Q9UM11 496 aa2.16□□□□□ -2.06
CD44-239ENST00000639002 SNX5Q9Y5X3 404 aa2.16□□□□□ -2.06
CD44-239ENST00000639002 FKBP7Q9Y680 259 aa2.16□□□□□ -2.06
CD44-239ENST00000639002 SLCO1B1Q9Y6L6 691 aa2.16□□□□□ -2.06
CD44-239ENST00000639002 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.15□□□□□ -2.07
CD44-239ENST00000639002 CCDC69A6NI79 296 aa2.15□□□□□ -2.07
CD44-239ENST00000639002 PTMAP06454 111 aaKnown RBP2.15□□□□□ -2.07
CD44-239ENST00000639002 CNN1P51911 297 aaKnown RBP2.15□□□□□ -2.07
CD44-239ENST00000639002 APOC4P55056 127 aa2.15□□□□□ -2.07
CD44-239ENST00000639002 RCN2Q14257 317 aa2.15□□□□□ -2.07
CD44-239ENST00000639002 ZSWIM7Q19AV6 140 aa2.15□□□□□ -2.07
CD44-239ENST00000639002 SMU1Q2TAY7 513 aa2.15□□□□□ -2.07
CD44-239ENST00000639002 SLC39A12Q504Y0 691 aa2.15□□□□□ -2.07
CD44-239ENST00000639002 TEX44Q53QW1 395 aa2.15□□□□□ -2.07
CD44-239ENST00000639002 GPBP1Q86WP2 473 aa2.15□□□□□ -2.07
CD44-239ENST00000639002 UNC45BQ8IWX7 931 aa2.15□□□□□ -2.07
CD44-239ENST00000639002 SAXO1Q8IYX7 474 aa2.15□□□□□ -2.07
CD44-239ENST00000639002 C10orf53Q8N6V4 93 aa2.15□□□□□ -2.07
CD44-239ENST00000639002 OR9A4Q8NGU2 314 aa2.15□□□□□ -2.07
CD44-239ENST00000639002 ART4Q93070 314 aa2.15□□□□□ -2.07
CD44-239ENST00000639002 CCDC43Q96MW1 224 aaKnown RBP2.15□□□□□ -2.07
CD44-239ENST00000639002 FAM213AQ9BRX8 229 aa2.15□□□□□ -2.07
CD44-239ENST00000639002 TMEM245Q9H330 911 aa2.15□□□□□ -2.07
CD44-239ENST00000639002 MMADHCQ9H3L0 296 aaPredicted RBP2.15□□□□□ -2.07
CD44-239ENST00000639002 CAB39LQ9H9S4 337 aa2.15□□□□□ -2.07
CD44-239ENST00000639002 STOX2Q9P2F5 926 aaPredicted RBP2.15□□□□□ -2.07
CD44-239ENST00000639002 COPS7AQ9UBW8 275 aa2.15□□□□□ -2.07
CD44-239ENST00000639002 ZSCAN5BA6NJL1 495 aa2.14□□□□□ -2.07
CD44-239ENST00000639002 EFNA2O43921 213 aa2.14□□□□□ -2.07
CD44-239ENST00000639002 ATP6V1G1O75348 118 aa2.14□□□□□ -2.07
CD44-239ENST00000639002 TGDSO95455 350 aa2.14□□□□□ -2.07
CD44-239ENST00000639002 INSP01308 110 aa2.14□□□□□ -2.07
CD44-239ENST00000639002 MMP1P03956 469 aa2.14□□□□□ -2.07
CD44-239ENST00000639002 GLULP15104 373 aa2.14□□□□□ -2.07
CD44-239ENST00000639002 CCNA2P20248 432 aa2.14□□□□□ -2.07
CD44-239ENST00000639002 CCNCP24863 283 aa2.14□□□□□ -2.07
CD44-239ENST00000639002 TMOD1P28289 359 aa2.14□□□□□ -2.07
CD44-239ENST00000639002 MARCKSP29966 332 aaPredicted RBP2.14□□□□□ -2.07
CD44-239ENST00000639002 SUCLG1P53597 346 aaKnown RBP2.14□□□□□ -2.07
CD44-239ENST00000639002 IL9RQ01113 521 aa2.14□□□□□ -2.07
CD44-239ENST00000639002 PLOD1Q02809 727 aaPredicted RBP2.14□□□□□ -2.07
CD44-239ENST00000639002 ZP4Q12836 540 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms