RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 CEP78Q5JTW2 689 aa18.79■□□□□ 0.6
SYNGAP1-227ENST00000638142 C6orf132Q5T0Z8 1188 aa18.79■□□□□ 0.6
SYNGAP1-227ENST00000638142 RFPL4BQ6ZWI9 263 aa18.79■□□□□ 0.6
SYNGAP1-227ENST00000638142 GID4Q8IVV7 300 aa18.79■□□□□ 0.6
SYNGAP1-227ENST00000638142 SRFBP1Q8NEF9 429 aaKnown RBP18.79■□□□□ 0.6
SYNGAP1-227ENST00000638142 OR9A2Q8NGT5 310 aa18.79■□□□□ 0.6
SYNGAP1-227ENST00000638142 KRCC1Q9NPI7 259 aaPredicted RBP18.79■□□□□ 0.6
SYNGAP1-227ENST00000638142 HINT3Q9NQE9 182 aaKnown RBP18.79■□□□□ 0.6
SYNGAP1-227ENST00000638142 A0A1W2PS29 197 aa18.79■□□□□ 0.6
SYNGAP1-227ENST00000638142 RNF13O43567 381 aa18.79■□□□□ 0.6
SYNGAP1-227ENST00000638142 ITGB8P26012 769 aa18.79■□□□□ 0.6
SYNGAP1-227ENST00000638142 HTRA3P83110 453 aa18.79■□□□□ 0.6
SYNGAP1-227ENST00000638142 MAB21L1Q13394 359 aa18.79■□□□□ 0.6
SYNGAP1-227ENST00000638142 ZNF57Q68EA5 555 aaPredicted RBP18.79■□□□□ 0.6
SYNGAP1-227ENST00000638142 FAM109AQ8N4B1 249 aa18.79■□□□□ 0.6
SYNGAP1-227ENST00000638142 SIRT6Q8N6T7 355 aa18.79■□□□□ 0.6
SYNGAP1-227ENST00000638142 TEX101Q9BY14 249 aa18.79■□□□□ 0.6
SYNGAP1-227ENST00000638142 OSGEPL1Q9H4B0 414 aa18.79■□□□□ 0.6
SYNGAP1-227ENST00000638142 IMP3Q9NV31 184 aaKnown RBP18.79■□□□□ 0.6
SYNGAP1-227ENST00000638142 MCUBQ9NWR8 336 aa18.79■□□□□ 0.6
SYNGAP1-227ENST00000638142 PTGFRNQ9P2B2 879 aa18.79■□□□□ 0.6
SYNGAP1-227ENST00000638142 MRPS23Q9Y3D9 190 aaKnown RBP18.79■□□□□ 0.6
SYNGAP1-227ENST00000638142 LOC102723532A0A0G2JNH3 316 aa18.78■□□□□ 0.6
SYNGAP1-227ENST00000638142 INMT-MINDY4F8WBC2 141 aa18.78■□□□□ 0.6
SYNGAP1-227ENST00000638142 OR2B3O76000 313 aa18.78■□□□□ 0.6
SYNGAP1-227ENST00000638142 THY1P04216 161 aa18.78■□□□□ 0.6
SYNGAP1-227ENST00000638142 ELK1P19419 428 aa18.78■□□□□ 0.6
SYNGAP1-227ENST00000638142 CERS1P27544 350 aa18.78■□□□□ 0.6
SYNGAP1-227ENST00000638142 BTBD16Q32M84 506 aa18.78■□□□□ 0.6
SYNGAP1-227ENST00000638142 CXXC5Q7LFL8 322 aaKnown RBP18.78■□□□□ 0.6
SYNGAP1-227ENST00000638142 CPOQ8IVL8 374 aa18.78■□□□□ 0.6
SYNGAP1-227ENST00000638142 SUN5Q8TC36 379 aa18.78■□□□□ 0.6
SYNGAP1-227ENST00000638142 TMEM255BQ8WV15 326 aa18.78■□□□□ 0.6
SYNGAP1-227ENST00000638142 SUSD6Q92537 303 aa18.78■□□□□ 0.6
SYNGAP1-227ENST00000638142 RSPRY1Q96DX4 576 aa18.78■□□□□ 0.6
SYNGAP1-227ENST00000638142 ZNF681Q96N22 645 aa18.78■□□□□ 0.6
SYNGAP1-227ENST00000638142 SLC6A20Q9NP91 592 aa18.78■□□□□ 0.6
SYNGAP1-227ENST00000638142 STMN3Q9NZ72 180 aa18.78■□□□□ 0.6
SYNGAP1-227ENST00000638142 EXTL2Q9UBQ6 330 aa18.78■□□□□ 0.6
SYNGAP1-227ENST00000638142 GPSM3Q9Y4H4 160 aa18.78■□□□□ 0.6
SYNGAP1-227ENST00000638142 ZNF780BQ9Y6R6 833 aa18.78■□□□□ 0.6
SYNGAP1-227ENST00000638142 PTPRSQ13332 1948 aa18.78■□□□□ 0.6
SYNGAP1-227ENST00000638142 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.78■□□□□ 0.6
SYNGAP1-227ENST00000638142 DUXAA6NLW8 204 aa18.78■□□□□ 0.6
SYNGAP1-227ENST00000638142 SOCS6O14544 535 aa18.78■□□□□ 0.6
SYNGAP1-227ENST00000638142 ZIC2O95409 532 aaPredicted RBP18.78■□□□□ 0.6
SYNGAP1-227ENST00000638142 SLC2A10O95528 541 aa18.78■□□□□ 0.6
SYNGAP1-227ENST00000638142 EPCAMP16422 314 aa18.78■□□□□ 0.6
SYNGAP1-227ENST00000638142 GCGRP47871 477 aa18.78■□□□□ 0.6
SYNGAP1-227ENST00000638142 HTRA4P83105 476 aaPredicted RBP18.78■□□□□ 0.6
SYNGAP1-227ENST00000638142 CSTF1Q05048 431 aaKnown RBP18.78■□□□□ 0.6
SYNGAP1-227ENST00000638142 HBMQ6B0K9 141 aa18.78■□□□□ 0.6
SYNGAP1-227ENST00000638142 HEPHL1Q6MZM0 1159 aa18.78■□□□□ 0.6
SYNGAP1-227ENST00000638142 SMARCD3Q6STE5 483 aa18.78■□□□□ 0.6
SYNGAP1-227ENST00000638142 LRRC28Q86X40 367 aaPredicted RBP18.78■□□□□ 0.6
SYNGAP1-227ENST00000638142 ACBD7Q8N6N7 88 aa18.78■□□□□ 0.6
SYNGAP1-227ENST00000638142 AKAP1Q92667 903 aaKnown RBP eCLIP18.78■□□□□ 0.6
SYNGAP1-227ENST00000638142 GIMAP5Q96F15 307 aa18.78■□□□□ 0.6
SYNGAP1-227ENST00000638142 WACQ9BTA9 647 aa18.78■□□□□ 0.6
SYNGAP1-227ENST00000638142 SARGQ9BW04 601 aa18.78■□□□□ 0.6
SYNGAP1-227ENST00000638142 NTNG1Q9Y2I2 539 aa18.78■□□□□ 0.6
SYNGAP1-227ENST00000638142 TPD52L2O43399 206 aaKnown RBP18.77■□□□□ 0.6
SYNGAP1-227ENST00000638142 PIP5K1CO60331 668 aa18.77■□□□□ 0.6
SYNGAP1-227ENST00000638142 NFATC1O95644 943 aa18.77■□□□□ 0.6
SYNGAP1-227ENST00000638142 CCL5P13501 91 aa18.77■□□□□ 0.6
SYNGAP1-227ENST00000638142 PAICSP22234 425 aaKnown RBP18.77■□□□□ 0.6
SYNGAP1-227ENST00000638142 PDX1P52945 283 aa18.77■□□□□ 0.6
SYNGAP1-227ENST00000638142 ATP12AP54707 1039 aa18.77■□□□□ 0.6
SYNGAP1-227ENST00000638142 BTG1P62324 171 aa18.77■□□□□ 0.6
SYNGAP1-227ENST00000638142 GAB4Q2WGN9 574 aa18.77■□□□□ 0.6
SYNGAP1-227ENST00000638142 FAM214AQ32MH5 1076 aa18.77■□□□□ 0.6
SYNGAP1-227ENST00000638142 BICRALQ6AI39 1079 aa18.77■□□□□ 0.6
SYNGAP1-227ENST00000638142 LAMTOR1Q6IAA8 161 aa18.77■□□□□ 0.6
SYNGAP1-227ENST00000638142 FAM20CQ8IXL6 584 aa18.77■□□□□ 0.6
SYNGAP1-227ENST00000638142 OR51G2Q8NGK0 314 aa18.77■□□□□ 0.6
SYNGAP1-227ENST00000638142 OR5M3Q8NGP4 307 aa18.77■□□□□ 0.6
SYNGAP1-227ENST00000638142 ADAMTS15Q8TE58 950 aa18.77■□□□□ 0.6
SYNGAP1-227ENST00000638142 GANCQ8TET4 914 aa18.77■□□□□ 0.6
SYNGAP1-227ENST00000638142 KCTD12Q96CX2 325 aaKnown RBP18.77■□□□□ 0.6
SYNGAP1-227ENST00000638142 SAMD8Q96LT4 415 aa18.77■□□□□ 0.6
SYNGAP1-227ENST00000638142 FCRL4Q96PJ5 515 aa18.77■□□□□ 0.6
SYNGAP1-227ENST00000638142 CITED4Q96RK1 184 aa18.77■□□□□ 0.6
SYNGAP1-227ENST00000638142 MKRN2Q9H000 416 aaKnown RBP18.77■□□□□ 0.6
SYNGAP1-227ENST00000638142 CYSLTR2Q9NS75 346 aa18.77■□□□□ 0.6
SYNGAP1-227ENST00000638142 BABAM2Q9NXR7 383 aa18.77■□□□□ 0.6
SYNGAP1-227ENST00000638142 FCMRO60667 390 aa18.77■□□□□ 0.59
SYNGAP1-227ENST00000638142 ICMTO60725 284 aa18.77■□□□□ 0.59
SYNGAP1-227ENST00000638142 HOXB3P14651 431 aaPredicted RBP18.77■□□□□ 0.59
SYNGAP1-227ENST00000638142 ERVK-21P61565 698 aa18.77■□□□□ 0.59
SYNGAP1-227ENST00000638142 SFTPA1Q8IWL2 248 aa18.77■□□□□ 0.59
SYNGAP1-227ENST00000638142 OR4M1Q8NGD0 313 aa18.77■□□□□ 0.59
SYNGAP1-227ENST00000638142 OR5H6Q8NGV6 325 aa18.77■□□□□ 0.59
SYNGAP1-227ENST00000638142 UBQLN3Q9H347 655 aa18.77■□□□□ 0.59
SYNGAP1-227ENST00000638142 WDR26Q9H7D7 661 aa18.77■□□□□ 0.59
SYNGAP1-227ENST00000638142 ZNF443Q9Y2A4 671 aaPredicted RBP18.77■□□□□ 0.59
SYNGAP1-227ENST00000638142 AKR7A2O43488 359 aa18.76■□□□□ 0.59
SYNGAP1-227ENST00000638142 SLC6A1P30531 599 aa18.76■□□□□ 0.59
SYNGAP1-227ENST00000638142 NUDT1P36639 197 aa18.76■□□□□ 0.59
SYNGAP1-227ENST00000638142 TALDO1P37837 337 aa18.76■□□□□ 0.59
SYNGAP1-227ENST00000638142 SMUG1Q53HV7 270 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms