RNA–Protein interactions for RNA: ENST00000633552.1

GPCPD1-207, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-207ENST00000633552 EIF3LQ9Y262 564 aaKnown RBP3.31□□□□□ -1.88
GPCPD1-207ENST00000633552 U3KQV3 271 aa3.31□□□□□ -1.88
GPCPD1-207ENST00000633552 NCAPD2Q15021 1401 aa3.3□□□□□ -1.88
GPCPD1-207ENST00000633552 A0A087WZY1 265 aa3.3□□□□□ -1.88
GPCPD1-207ENST00000633552 IGHV3-35A0A0C4DH35 117 aa3.3□□□□□ -1.88
GPCPD1-207ENST00000633552 ZSCAN5BA6NJL1 495 aa3.3□□□□□ -1.88
GPCPD1-207ENST00000633552 E9PLD3 99 aa3.3□□□□□ -1.88
GPCPD1-207ENST00000633552 TM9SF1O15321 606 aa3.3□□□□□ -1.88
GPCPD1-207ENST00000633552 MBD3O95983 291 aa3.3□□□□□ -1.88
GPCPD1-207ENST00000633552 IGHV1-2P23083 117 aa3.3□□□□□ -1.88
GPCPD1-207ENST00000633552 FASP25445 335 aa3.3□□□□□ -1.88
GPCPD1-207ENST00000633552 ATP5A1P25705 553 aaKnown RBP3.3□□□□□ -1.88
GPCPD1-207ENST00000633552 ADRA1AP35348 466 aa3.3□□□□□ -1.88
GPCPD1-207ENST00000633552 CD86P42081 329 aa3.3□□□□□ -1.88
GPCPD1-207ENST00000633552 OR3A4PP47883 348 aa3.3□□□□□ -1.88
GPCPD1-207ENST00000633552 DHPSP49366 369 aaPredicted RBP3.3□□□□□ -1.88
GPCPD1-207ENST00000633552 GPC3P51654 580 aa3.3□□□□□ -1.88
GPCPD1-207ENST00000633552 NTHL1P78549 312 aa3.3□□□□□ -1.88
GPCPD1-207ENST00000633552 HTD2P86397 168 aa3.3□□□□□ -1.88
GPCPD1-207ENST00000633552 PDZK1IP1Q13113 114 aa3.3□□□□□ -1.88
GPCPD1-207ENST00000633552 DCAF4L1Q3SXM0 396 aa3.3□□□□□ -1.88
GPCPD1-207ENST00000633552 TTC31Q49AM3 519 aaPredicted RBP3.3□□□□□ -1.88
GPCPD1-207ENST00000633552 ZNF57Q68EA5 555 aaPredicted RBP3.3□□□□□ -1.88
GPCPD1-207ENST00000633552 LRRC8BQ6P9F7 803 aa3.3□□□□□ -1.88
GPCPD1-207ENST00000633552 CBWD2Q8IUF1 395 aa3.3□□□□□ -1.88
GPCPD1-207ENST00000633552 FBXL16Q8N461 479 aa3.3□□□□□ -1.88
GPCPD1-207ENST00000633552 CNIH3Q8TBE1 160 aa3.3□□□□□ -1.88
GPCPD1-207ENST00000633552 UBE2Q2Q8WVN8 375 aa3.3□□□□□ -1.88
GPCPD1-207ENST00000633552 AKR1E2Q96JD6 320 aa3.3□□□□□ -1.88
GPCPD1-207ENST00000633552 C16orf45Q96MC5 204 aaPredicted RBP3.3□□□□□ -1.88
GPCPD1-207ENST00000633552 CRNKL1Q9BZJ0 848 aaKnown RBP3.3□□□□□ -1.88
GPCPD1-207ENST00000633552 CCSER1Q9C0I3 900 aa3.3□□□□□ -1.88
GPCPD1-207ENST00000633552 POLR3FQ9H1D9 316 aaPredicted RBP3.3□□□□□ -1.88
GPCPD1-207ENST00000633552 IKZF5Q9H5V7 419 aa3.3□□□□□ -1.88
GPCPD1-207ENST00000633552 DHX33Q9H6R0 707 aaKnown RBP3.3□□□□□ -1.88
GPCPD1-207ENST00000633552 POLE3Q9NRF9 147 aa3.3□□□□□ -1.88
GPCPD1-207ENST00000633552 FLVCR1Q9Y5Y0 555 aa3.3□□□□□ -1.88
GPCPD1-207ENST00000633552 KLF18A0A0U1RQI7 1052 aa3.29□□□□□ -1.88
GPCPD1-207ENST00000633552 FAM168BA1KXE4 195 aa3.29□□□□□ -1.88
GPCPD1-207ENST00000633552 SAGE2PA6NJ88 616 aa3.29□□□□□ -1.88
GPCPD1-207ENST00000633552 CHADO15335 359 aa3.29□□□□□ -1.88
GPCPD1-207ENST00000633552 CLDN3O15551 220 aa3.29□□□□□ -1.88
GPCPD1-207ENST00000633552 JAK2O60674 1132 aa3.29□□□□□ -1.88
GPCPD1-207ENST00000633552 RAMP1O60894 148 aa3.29□□□□□ -1.88
GPCPD1-207ENST00000633552 OR4F21O95013 312 aa3.29□□□□□ -1.88
GPCPD1-207ENST00000633552 BCKDHAP12694 445 aa3.29□□□□□ -1.88
GPCPD1-207ENST00000633552 ZBTB25P24278 435 aa3.29□□□□□ -1.88
GPCPD1-207ENST00000633552 P2RY4P51582 365 aa3.29□□□□□ -1.88
GPCPD1-207ENST00000633552 IGLV3-21P80748 117 aaPredicted RBP3.29□□□□□ -1.88
GPCPD1-207ENST00000633552 TPD52L1Q16890 204 aaPredicted RBP3.29□□□□□ -1.88
GPCPD1-207ENST00000633552 CCDC57Q2TAC2 916 aa3.29□□□□□ -1.88
GPCPD1-207ENST00000633552 KRT71Q3SY84 523 aa3.29□□□□□ -1.88
GPCPD1-207ENST00000633552 USH1GQ495M9 461 aa3.29□□□□□ -1.88
GPCPD1-207ENST00000633552 NIPAL3Q6P499 406 aa3.29□□□□□ -1.88
GPCPD1-207ENST00000633552 PAMR1Q6UXH9 720 aa3.29□□□□□ -1.88
GPCPD1-207ENST00000633552 LANCL3Q6ZV70 420 aa3.29□□□□□ -1.88
GPCPD1-207ENST00000633552 TMEM17Q86X19 198 aa3.29□□□□□ -1.88
GPCPD1-207ENST00000633552 CENPLQ8N0S6 344 aaPredicted RBP3.29□□□□□ -1.88
GPCPD1-207ENST00000633552 ADAMTS16Q8TE57 1224 aa3.29□□□□□ -1.88
GPCPD1-207ENST00000633552 PSMG2Q969U7 264 aa3.29□□□□□ -1.88
GPCPD1-207ENST00000633552 C18orf25Q96B23 403 aaPredicted RBP3.29□□□□□ -1.88
GPCPD1-207ENST00000633552 TMEM80Q96HE8 168 aa3.29□□□□□ -1.88
GPCPD1-207ENST00000633552 CNOT6LQ96LI5 555 aaKnown RBP3.29□□□□□ -1.88
GPCPD1-207ENST00000633552 TMEM121Q9BTD3 319 aa3.29□□□□□ -1.88
GPCPD1-207ENST00000633552 THUMPD2Q9BTF0 503 aaKnown RBP3.29□□□□□ -1.88
GPCPD1-207ENST00000633552 PAXXQ9BUH6 204 aa3.29□□□□□ -1.88
GPCPD1-207ENST00000633552 WDR76Q9H967 626 aa3.29□□□□□ -1.88
GPCPD1-207ENST00000633552 EHFQ9NZC4 300 aa3.29□□□□□ -1.88
GPCPD1-207ENST00000633552 B4GALT7Q9UBV7 327 aa3.29□□□□□ -1.88
GPCPD1-207ENST00000633552 KLHL21Q9UJP4 597 aa3.29□□□□□ -1.88
GPCPD1-207ENST00000633552 PPIAL4AQ9Y536 164 aa3.29□□□□□ -1.88
GPCPD1-207ENST00000633552 CFAP65Q6ZU64 1925 aaKnown RBP3.29□□□□□ -1.88
GPCPD1-207ENST00000633552 C19orf81C9J6K1 198 aa3.28□□□□□ -1.88
GPCPD1-207ENST00000633552 DUX1O43812 170 aa3.28□□□□□ -1.88
GPCPD1-207ENST00000633552 TRIM3O75382 744 aaPredicted RBP3.28□□□□□ -1.88
GPCPD1-207ENST00000633552 PTMAP06454 111 aaKnown RBP3.28□□□□□ -1.88
GPCPD1-207ENST00000633552 CD55P08174 381 aa3.28□□□□□ -1.88
GPCPD1-207ENST00000633552 UGT1A3P35503 534 aa3.28□□□□□ -1.88
GPCPD1-207ENST00000633552 ERVPABLB-1P60509 514 aa3.28□□□□□ -1.88
GPCPD1-207ENST00000633552 RPL32P62910 135 aaKnown RBP3.28□□□□□ -1.88
GPCPD1-207ENST00000633552 BCL2L1Q07817 233 aa3.28□□□□□ -1.88
GPCPD1-207ENST00000633552 TMEM41BQ5BJD5 291 aa3.28□□□□□ -1.88
GPCPD1-207ENST00000633552 FHL5Q5TD97 284 aa3.28□□□□□ -1.88
GPCPD1-207ENST00000633552 SULT1C3Q6IMI6 304 aa3.28□□□□□ -1.88
GPCPD1-207ENST00000633552 TMEM184AQ6ZMB5 413 aa3.28□□□□□ -1.88
GPCPD1-207ENST00000633552 DPY19L4Q7Z388 723 aa3.28□□□□□ -1.88
GPCPD1-207ENST00000633552 LHFPL4Q7Z7J7 247 aa3.28□□□□□ -1.88
GPCPD1-207ENST00000633552 ZNF573Q86YE8 665 aa3.28□□□□□ -1.88
GPCPD1-207ENST00000633552 APOBEC3FQ8IUX4 373 aaKnown RBP3.28□□□□□ -1.88
GPCPD1-207ENST00000633552 HSCBQ8IWL3 235 aa3.28□□□□□ -1.88
GPCPD1-207ENST00000633552 FBXO16Q8IX29 292 aaPredicted RBP3.28□□□□□ -1.88
GPCPD1-207ENST00000633552 C9orf40Q8IXQ3 194 aa3.28□□□□□ -1.88
GPCPD1-207ENST00000633552 SPEM1Q8N4L4 309 aa3.28□□□□□ -1.88
GPCPD1-207ENST00000633552 OR5AU1Q8NGC0 362 aa3.28□□□□□ -1.88
GPCPD1-207ENST00000633552 KIR2DL4Q99706 377 aa3.28□□□□□ -1.88
GPCPD1-207ENST00000633552 COG4Q9H9E3 785 aa3.28□□□□□ -1.88
GPCPD1-207ENST00000633552 AGPAT5Q9NUQ2 364 aa3.28□□□□□ -1.88
GPCPD1-207ENST00000633552 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.28□□□□□ -1.88
GPCPD1-207ENST00000633552 Q9UF83 564 aa3.28□□□□□ -1.88
GPCPD1-207ENST00000633552 XPO7Q9UIA9 1087 aaKnown RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms