RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 TEX35Q5T0J7 233 aa12.27□□□□□ -0.45
SNX1-214ENST00000625244 LGSNQ5TDP6 509 aa12.27□□□□□ -0.45
SNX1-214ENST00000625244 RINLQ6ZS11 566 aa12.27□□□□□ -0.45
SNX1-214ENST00000625244 PEG10Q86TG7 708 aaKnown RBP12.27□□□□□ -0.45
SNX1-214ENST00000625244 FBXO36Q8NEA4 188 aa12.27□□□□□ -0.45
SNX1-214ENST00000625244 FBXO25Q8TCJ0 367 aa12.27□□□□□ -0.45
SNX1-214ENST00000625244 C1GALT1C1Q96EU7 318 aa12.27□□□□□ -0.45
SNX1-214ENST00000625244 RADILQ96JH8 1075 aa12.27□□□□□ -0.45
SNX1-214ENST00000625244 RTN4RQ9BZR6 473 aa12.27□□□□□ -0.45
SNX1-214ENST00000625244 SAYSD1Q9NPB0 183 aa12.27□□□□□ -0.45
SNX1-214ENST00000625244 POU2F3Q9UKI9 436 aa12.27□□□□□ -0.45
SNX1-214ENST00000625244 CORO1CQ9ULV4 474 aaPredicted RBP12.27□□□□□ -0.45
SNX1-214ENST00000625244 ZNF814B7Z6K7 855 aa12.26□□□□□ -0.45
SNX1-214ENST00000625244 E7ESA3 106 aa12.26□□□□□ -0.45
SNX1-214ENST00000625244 BANF1O75531 89 aa12.26□□□□□ -0.45
SNX1-214ENST00000625244 SYNGR4O95473 234 aa12.26□□□□□ -0.45
SNX1-214ENST00000625244 CT45A8P0DMV1 189 aa12.26□□□□□ -0.45
SNX1-214ENST00000625244 CT45A9P0DMV2 189 aa12.26□□□□□ -0.45
SNX1-214ENST00000625244 IL2RGP31785 369 aa12.26□□□□□ -0.45
SNX1-214ENST00000625244 EVI2BP34910 448 aa12.26□□□□□ -0.45
SNX1-214ENST00000625244 ARFIP1P53367 373 aa12.26□□□□□ -0.45
SNX1-214ENST00000625244 CORO7P57737 925 aa12.26□□□□□ -0.45
SNX1-214ENST00000625244 ITGADQ13349 1161 aa12.26□□□□□ -0.45
SNX1-214ENST00000625244 CARTPTQ16568 116 aa12.26□□□□□ -0.45
SNX1-214ENST00000625244 TMEM44Q2T9K0 475 aa12.26□□□□□ -0.45
SNX1-214ENST00000625244 MSS51Q4VC12 460 aa12.26□□□□□ -0.45
SNX1-214ENST00000625244 CT45A2Q5DJT8 189 aa12.26□□□□□ -0.45
SNX1-214ENST00000625244 SULT1C3Q6IMI6 304 aa12.26□□□□□ -0.45
SNX1-214ENST00000625244 SLC22A25Q6T423 547 aa12.26□□□□□ -0.45
SNX1-214ENST00000625244 ANKMY2Q8IV38 441 aa12.26□□□□□ -0.45
SNX1-214ENST00000625244 SPATA6LQ8N4H0 392 aa12.26□□□□□ -0.45
SNX1-214ENST00000625244 KCTD4Q8WVF5 259 aa12.26□□□□□ -0.45
SNX1-214ENST00000625244 EFHD2Q96C19 240 aaPredicted RBP12.26□□□□□ -0.45
SNX1-214ENST00000625244 BTBD9Q96Q07 612 aa12.26□□□□□ -0.45
SNX1-214ENST00000625244 FMO2Q99518 471 aa12.26□□□□□ -0.45
SNX1-214ENST00000625244 USB1Q9BQ65 265 aaKnown RBP12.26□□□□□ -0.45
SNX1-214ENST00000625244 RHOXF2Q9BQY4 288 aa12.26□□□□□ -0.45
SNX1-214ENST00000625244 ZNF747Q9BV97 191 aa12.26□□□□□ -0.45
SNX1-214ENST00000625244 PRODH2Q9UF12 536 aa12.26□□□□□ -0.45
SNX1-214ENST00000625244 TEX264Q9Y6I9 313 aa12.26□□□□□ -0.45
SNX1-214ENST00000625244 LYZL6O75951 148 aa12.25□□□□□ -0.45
SNX1-214ENST00000625244 SLU7O95391 586 aaKnown RBP12.25□□□□□ -0.45
SNX1-214ENST00000625244 IL12BP29460 328 aa12.25□□□□□ -0.45
SNX1-214ENST00000625244 FEN1P39748 380 aaKnown RBP12.25□□□□□ -0.45
SNX1-214ENST00000625244 PIK3CBP42338 1070 aa12.25□□□□□ -0.45
SNX1-214ENST00000625244 TAS2R39P59534 338 aa12.25□□□□□ -0.45
SNX1-214ENST00000625244 DUSP2Q05923 314 aa12.25□□□□□ -0.45
SNX1-214ENST00000625244 GLYR1Q49A26 553 aaPredicted RBP12.25□□□□□ -0.45
SNX1-214ENST00000625244 NPSR1Q6W5P4 371 aa12.25□□□□□ -0.45
SNX1-214ENST00000625244 DEF8Q6ZN54 512 aa12.25□□□□□ -0.45
SNX1-214ENST00000625244 OR2W6PQ8NHA6 318 aa12.25□□□□□ -0.45
SNX1-214ENST00000625244 CDKL2Q92772 493 aa12.25□□□□□ -0.45
SNX1-214ENST00000625244 CERS2Q96G23 380 aa12.25□□□□□ -0.45
SNX1-214ENST00000625244 BPESC1Q9GZL8 116 aa12.25□□□□□ -0.45
SNX1-214ENST00000625244 PTGES2Q9H7Z7 377 aa12.25□□□□□ -0.45
SNX1-214ENST00000625244 PLAC1Q9HBJ0 212 aa12.25□□□□□ -0.45
SNX1-214ENST00000625244 FLRT3Q9NZU0 649 aa12.25□□□□□ -0.45
SNX1-214ENST00000625244 DMGDHQ9UI17 866 aaKnown RBP12.25□□□□□ -0.45
SNX1-214ENST00000625244 TRIM77I1YAP6 450 aa12.24□□□□□ -0.45
SNX1-214ENST00000625244 TNFSF11O14788 317 aa12.24□□□□□ -0.45
SNX1-214ENST00000625244 ADAMDEC1O15204 470 aa12.24□□□□□ -0.45
SNX1-214ENST00000625244 TP73O15350 636 aa12.24□□□□□ -0.45
SNX1-214ENST00000625244 FADS1O60427 444 aa12.24□□□□□ -0.45
SNX1-214ENST00000625244 ATP1B1P05026 303 aa12.24□□□□□ -0.45
SNX1-214ENST00000625244 GSTA2P09210 222 aa12.24□□□□□ -0.45
SNX1-214ENST00000625244 PCSK2P16519 638 aa12.24□□□□□ -0.45
SNX1-214ENST00000625244 PTX3P26022 381 aaPredicted RBP12.24□□□□□ -0.45
SNX1-214ENST00000625244 KRT20P35900 424 aa12.24□□□□□ -0.45
SNX1-214ENST00000625244 PNLIPRP2P54317 469 aa12.24□□□□□ -0.45
SNX1-214ENST00000625244 GPX6P59796 221 aa12.24□□□□□ -0.45
SNX1-214ENST00000625244 MRPS35P82673 323 aaKnown RBP12.24□□□□□ -0.45
SNX1-214ENST00000625244 LTB4RQ15722 352 aa12.24□□□□□ -0.45
SNX1-214ENST00000625244 TMEM201Q5SNT2 666 aa12.24□□□□□ -0.45
SNX1-214ENST00000625244 ARFGEF3Q5TH69 2177 aa12.24□□□□□ -0.45
SNX1-214ENST00000625244 SHISA2Q6UWI4 295 aa12.24□□□□□ -0.45
SNX1-214ENST00000625244 ZDHHC24Q6UX98 284 aa12.24□□□□□ -0.45
SNX1-214ENST00000625244 TUSC5Q8IXB3 177 aa12.24□□□□□ -0.45
SNX1-214ENST00000625244 LINC01356Q8N9X3 169 aa12.24□□□□□ -0.45
SNX1-214ENST00000625244 OR4N2Q8NGD1 307 aa12.24□□□□□ -0.45
SNX1-214ENST00000625244 OR2V1Q8NHB1 315 aa12.24□□□□□ -0.45
SNX1-214ENST00000625244 UHMK1Q8TAS1 419 aaKnown RBP12.24□□□□□ -0.45
SNX1-214ENST00000625244 ZNF418Q8TF45 676 aaPredicted RBP12.24□□□□□ -0.45
SNX1-214ENST00000625244 DUSP19Q8WTR2 217 aa12.24□□□□□ -0.45
SNX1-214ENST00000625244 ABHD3Q8WU67 409 aa12.24□□□□□ -0.45
SNX1-214ENST00000625244 MUCL1Q96DR8 90 aa12.24□□□□□ -0.45
SNX1-214ENST00000625244 SORCS2Q96PQ0 1159 aa12.24□□□□□ -0.45
SNX1-214ENST00000625244 RBM4Q9BWF3 364 aaKnown RBP12.24□□□□□ -0.45
SNX1-214ENST00000625244 ANKRA2Q9H9E1 313 aa12.24□□□□□ -0.45
SNX1-214ENST00000625244 PAQR5Q9NXK6 330 aaPredicted RBP12.24□□□□□ -0.45
SNX1-214ENST00000625244 NSMCE4AQ9NXX6 385 aa12.24□□□□□ -0.45
SNX1-214ENST00000625244 TXNDC16Q9P2K2 825 aa12.24□□□□□ -0.45
SNX1-214ENST00000625244 CES1P1Q9UKY3 287 aa12.24□□□□□ -0.45
SNX1-214ENST00000625244 PMF1-BGLAPU3KQ54 211 aa12.24□□□□□ -0.45
SNX1-214ENST00000625244 LOC390937A0A1W2PQ73 354 aa12.23□□□□□ -0.45
SNX1-214ENST00000625244 GMFGO60234 142 aa12.23□□□□□ -0.45
SNX1-214ENST00000625244 PHBP35232 272 aa12.23□□□□□ -0.45
SNX1-214ENST00000625244 MAGEA4P43358 317 aa12.23□□□□□ -0.45
SNX1-214ENST00000625244 HILS1P60008 231 aa12.23□□□□□ -0.45
SNX1-214ENST00000625244 MGAT5Q09328 741 aa12.23□□□□□ -0.45
SNX1-214ENST00000625244 ILF2Q12905 390 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms