RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 AMZ1Q400G9 498 aa15.18■□□□□ 0.02
LDB3-208ENST00000623007 PLK5Q496M5 336 aa15.18■□□□□ 0.02
LDB3-208ENST00000623007 MRPL2Q5T653 305 aaKnown RBP15.18■□□□□ 0.02
LDB3-208ENST00000623007 UBE2UQ5VVX9 321 aa15.18■□□□□ 0.02
LDB3-208ENST00000623007 SLC27A4Q6P1M0 643 aa15.18■□□□□ 0.02
LDB3-208ENST00000623007 TTLL10Q6ZVT0 673 aa15.18■□□□□ 0.02
LDB3-208ENST00000623007 AHSA2Q719I0 299 aa15.18■□□□□ 0.02
LDB3-208ENST00000623007 KANSL1Q7Z3B3 1105 aa15.18■□□□□ 0.02
LDB3-208ENST00000623007 COMTD1Q86VU5 262 aa15.18■□□□□ 0.02
LDB3-208ENST00000623007 CYP4Z2PQ8N1L4 340 aa15.18■□□□□ 0.02
LDB3-208ENST00000623007 CLIP4Q8N3C7 705 aa15.18■□□□□ 0.02
LDB3-208ENST00000623007 STX19Q8N4C7 294 aa15.18■□□□□ 0.02
LDB3-208ENST00000623007 FAR1Q8WVX9 515 aa15.18■□□□□ 0.02
LDB3-208ENST00000623007 PIK3R3Q92569 461 aa15.18■□□□□ 0.02
LDB3-208ENST00000623007 ZG16BQ96DA0 208 aa15.18■□□□□ 0.02
LDB3-208ENST00000623007 TRIM2Q9C040 744 aa15.18■□□□□ 0.02
LDB3-208ENST00000623007 ACOT13Q9NPJ3 140 aa15.18■□□□□ 0.02
LDB3-208ENST00000623007 MED17Q9NVC6 651 aa15.18■□□□□ 0.02
LDB3-208ENST00000623007 ERVK-18Q9QC07 812 aa15.18■□□□□ 0.02
LDB3-208ENST00000623007 CHST2Q9Y4C5 530 aa15.18■□□□□ 0.02
LDB3-208ENST00000623007 XIRP2A4UGR9 3374 aa15.17■□□□□ 0.02
LDB3-208ENST00000623007 CNOT3O75175 753 aaKnown RBP15.17■□□□□ 0.02
LDB3-208ENST00000623007 CER1O95813 267 aa15.17■□□□□ 0.02
LDB3-208ENST00000623007 HBQ1P09105 142 aa15.17■□□□□ 0.02
LDB3-208ENST00000623007 ENDOUP21128 410 aaKnown RBP15.17■□□□□ 0.02
LDB3-208ENST00000623007 FBLP22087 321 aaKnown RBP15.17■□□□□ 0.02
LDB3-208ENST00000623007 GIPRP48546 466 aa15.17■□□□□ 0.02
LDB3-208ENST00000623007 DUSP3P51452 185 aaPredicted RBP15.17■□□□□ 0.02
LDB3-208ENST00000623007 ELAVL1Q15717 326 aaKnown RBP15.17■□□□□ 0.02
LDB3-208ENST00000623007 RNLSQ5VYX0 342 aa15.17■□□□□ 0.02
LDB3-208ENST00000623007 GDF7Q7Z4P5 450 aa15.17■□□□□ 0.02
LDB3-208ENST00000623007 FAM26EQ8N5C1 309 aa15.17■□□□□ 0.02
LDB3-208ENST00000623007 ZNF527Q8NB42 609 aa15.17■□□□□ 0.02
LDB3-208ENST00000623007 OR4D9Q8NGE8 314 aa15.17■□□□□ 0.02
LDB3-208ENST00000623007 SAP25Q8TEE9 199 aa15.17■□□□□ 0.02
LDB3-208ENST00000623007 DAZLQ92904 295 aaKnown RBP15.17■□□□□ 0.02
LDB3-208ENST00000623007 CCDC74AQ96AQ1 378 aa15.17■□□□□ 0.02
LDB3-208ENST00000623007 PTCHD1Q96NR3 888 aa15.17■□□□□ 0.02
LDB3-208ENST00000623007 SEMA4GQ9NTN9 838 aa15.17■□□□□ 0.02
LDB3-208ENST00000623007 SLC35A3Q9Y2D2 325 aa15.17■□□□□ 0.02
LDB3-208ENST00000623007 ABCA7Q8IZY2 2146 aa15.17■□□□□ 0.02
LDB3-208ENST00000623007 TNRC6BQ9UPQ9 1833 aaKnown RBP15.17■□□□□ 0.02
LDB3-208ENST00000623007 H3BMQ9 156 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 MED26O95402 600 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 CTSBP07858 339 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 CYC1P08574 325 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 ALAS2P22557 587 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 RORAP35398 523 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 RBM34P42696 430 aaKnown RBP15.16■□□□□ 0.02
LDB3-208ENST00000623007 SEPHS1P49903 392 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 ATP12AP54707 1039 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 MAT1AQ00266 395 aaKnown RBP15.16■□□□□ 0.02
LDB3-208ENST00000623007 CDK5Q00535 292 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 LINC00299Q6ZSB3 139 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 WDR53Q7Z5U6 358 aaPredicted RBP15.16■□□□□ 0.02
LDB3-208ENST00000623007 MRGPREQ86SM8 312 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 C1orf210Q8IVY1 113 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 OR14A16Q8NHC5 309 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 WDR36Q8NI36 951 aaKnown RBP15.16■□□□□ 0.02
LDB3-208ENST00000623007 COG8Q96MW5 612 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 WFDC6Q9BQY6 131 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 CNPPD1Q9BV87 410 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 CDCA4Q9BXL8 241 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 NECTIN3Q9NQS3 549 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 LANCL2Q9NS86 450 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 FGF21Q9NSA1 209 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 CBLCQ9ULV8 474 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 OR10H1Q9Y4A9 318 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 CLDN16Q9Y5I7 305 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 NINQ8N4C6 2090 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 SLC22A1O15245 554 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 MT-ND2P03891 347 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 HMGN1P05114 100 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 CSF2RBP32927 897 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 OMPP47874 163 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 PCYT1AP49585 367 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 ZNF136P52737 540 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.16■□□□□ 0.02
LDB3-208ENST00000623007 NCF4Q15080 339 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 CCNJQ5T5M9 372 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 FIGNL1Q6PIW4 674 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 LSMEM1Q8N8F7 131 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 ZNF615Q8N8J6 731 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 Q8N9G6 341 aaPredicted RBP15.16■□□□□ 0.02
LDB3-208ENST00000623007 OR1L3Q8NH93 324 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 GGHQ92820 318 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 ZNF501Q96CX3 271 aaPredicted RBP15.16■□□□□ 0.02
LDB3-208ENST00000623007 ITPAQ9BY32 194 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 RBCK1Q9BYM8 510 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 TGIF2Q9GZN2 237 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 PRDM6Q9NQX0 595 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 IL20Q9NYY1 176 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 SELENONQ9NZV5 590 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 ENPP5Q9UJA9 477 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 ERVK-19Q9WJR5 959 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 GPR55Q9Y2T6 319 aaPredicted RBP15.16■□□□□ 0.02
LDB3-208ENST00000623007 CLCA3PQ9Y6N3 262 aa15.16■□□□□ 0.02
LDB3-208ENST00000623007 IGKV3D-11A0A0A0MRZ8 115 aa15.15■□□□□ 0.02
LDB3-208ENST00000623007 CLDN24A6NM45 220 aa15.15■□□□□ 0.02
LDB3-208ENST00000623007 OR6C76A6NM76 312 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms