RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 ADAMTS16Q8TE57 1224 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 DDIT4LQ96D03 193 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 SENP5Q96HI0 755 aaPredicted RBP8.67□□□□□ -1.02
GGA3-223ENST00000621870 OR7D2Q96RA2 312 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 QRSL1Q9H0R6 528 aaKnown RBP8.67□□□□□ -1.02
GGA3-223ENST00000621870 TMEM165Q9HC07 324 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 WNT16Q9UBV4 365 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 GJE1A6NN92 205 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 MITFO75030 526 aaPredicted RBP8.67□□□□□ -1.02
GGA3-223ENST00000621870 NUDT7P0C024 238 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 MAOAP21397 527 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 CNR2P34972 360 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 BCL6P41182 706 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 RORCP51449 518 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 CCR5P51681 352 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 PIGGQ5H8A4 983 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 AGBL4Q5VU57 503 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 TMEM236Q5W0B7 351 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 BICRALQ6AI39 1079 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 FCRLBQ6BAA4 426 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 ARHGAP11AQ6P4F7 1023 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 ABHD17CQ6PCB6 329 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 CD300LGQ6UXG3 332 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 ZFP41Q8N8Y5 198 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 TEX19Q8NA77 164 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 IFI44Q8TCB0 444 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 BORCS5Q969J3 196 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 LOC100509620A0A075B734 347 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 SLC22A31A6NKX4 558 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 CLDN25C9JDP6 229 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 J3QRK9 145 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 SORBS2O94875 1100 aaKnown RBP8.67□□□□□ -1.02
GGA3-223ENST00000621870 STSP08842 583 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 POU3F2P20265 443 aaPredicted RBP8.67□□□□□ -1.02
GGA3-223ENST00000621870 RRADP55042 308 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 GFERP55789 205 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 PFN3P60673 137 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 TNFRSF17Q02223 184 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 VEZF1Q14119 521 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 ZNF750Q32MQ0 723 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 ALG10Q5BKT4 473 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 C6orf141Q5SZD1 244 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 PIP5KL1Q5T9C9 394 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 C9orf135Q5VTT2 229 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 LIPKQ5VXJ0 399 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 GTF2IRD2BQ6EKJ0 949 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 LCN8Q6JVE9 175 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 TMEM207Q6UWW9 146 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 FAM83HQ6ZRV2 1179 aaPredicted RBP8.67□□□□□ -1.02
GGA3-223ENST00000621870 SHFQ7M4L6 423 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 UBE2Q1Q7Z7E8 422 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 GTF2IRD2Q86UP8 949 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 VRK2Q86Y07 508 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 TMEM239Q8WW34 195 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 ZNF300Q96RE9 604 aaPredicted RBP8.67□□□□□ -1.02
GGA3-223ENST00000621870 TREX2Q9BQ50 279 aaPredicted RBP8.67□□□□□ -1.02
GGA3-223ENST00000621870 UTP23Q9BRU9 249 aaKnown RBP8.67□□□□□ -1.02
GGA3-223ENST00000621870 ACSS1Q9NUB1 689 aaPredicted RBP8.67□□□□□ -1.02
GGA3-223ENST00000621870 WSB2Q9NYS7 404 aaPredicted RBP8.67□□□□□ -1.02
GGA3-223ENST00000621870 PCDHGA7Q9Y5G6 932 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 PCDHA9Q9Y5H5 950 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 HEMK1Q9Y5R4 338 aaPredicted RBP8.67□□□□□ -1.02
GGA3-223ENST00000621870 CSNK1G3Q9Y6M4 447 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 CUL9Q8IWT3 2517 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 ABCB7O75027 752 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 PPP1R3DO95685 299 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 ADAP00813 363 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 CD79AP11912 226 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 F8A1P23610 371 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 DCKP27707 260 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 SSTR4P31391 388 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 SLC6A8P48029 635 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 ZNF423Q2M1K9 1284 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 NADK2Q4G0N4 442 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 CCDC92Q53HC0 331 aaPredicted RBP8.66□□□□□ -1.02
GGA3-223ENST00000621870 RUNDC3AQ59EK9 446 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 HS3ST5Q8IZT8 346 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 L3MBTL4Q8NA19 623 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 FER1L6-AS2Q96M78 137 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 PKMYT1Q99640 499 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 CDC6Q99741 560 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 WDR83Q9BRX9 315 aaKnown RBP8.66□□□□□ -1.02
GGA3-223ENST00000621870 ITPAQ9BY32 194 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 YTHDF1Q9BYJ9 559 aaKnown RBP8.66□□□□□ -1.02
GGA3-223ENST00000621870 ATP13A2Q9NQ11 1180 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 A6NHS1 94 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 GALR3O60755 368 aaPredicted RBP8.66□□□□□ -1.02
GGA3-223ENST00000621870 JRKO75564 520 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 PKLRP30613 574 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 DCTP40126 519 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 TMEM176BQ3YBM2 270 aaPredicted RBP8.66□□□□□ -1.02
GGA3-223ENST00000621870 VWA2Q5GFL6 755 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 TMEM201Q5SNT2 666 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 CLEC14AQ86T13 490 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 CPOQ8IVL8 374 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 ESX1Q8N693 406 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 ENDOVQ8N8Q3 282 aaKnown RBP8.66□□□□□ -1.02
GGA3-223ENST00000621870 COQ10AQ96MF6 247 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 TWSG1Q9GZX9 223 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 SMOC1Q9H4F8 434 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms