RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 AIG1Q9NVV5 245 aa14.54□□□□□ -0.08
BRCA1-228ENST00000618469 CAMK2AQ9UQM7 478 aa14.54□□□□□ -0.08
BRCA1-228ENST00000618469 RNF6Q9Y252 685 aa14.54□□□□□ -0.08
BRCA1-228ENST00000618469 FAM90A27PA6NNH2 459 aa14.53□□□□□ -0.08
BRCA1-228ENST00000618469 B4DXG7 233 aa14.53□□□□□ -0.08
BRCA1-228ENST00000618469 KLF11O14901 512 aa14.53□□□□□ -0.08
BRCA1-228ENST00000618469 ANKRD28O15084 1053 aa14.53□□□□□ -0.08
BRCA1-228ENST00000618469 KCNK2O95069 426 aa14.53□□□□□ -0.08
BRCA1-228ENST00000618469 BMP7P18075 431 aa14.53□□□□□ -0.08
BRCA1-228ENST00000618469 SRD5A2P31213 254 aa14.53□□□□□ -0.08
BRCA1-228ENST00000618469 CLK3P49761 638 aaKnown RBP14.53□□□□□ -0.08
BRCA1-228ENST00000618469 POU6F2P78424 691 aaPredicted RBP14.53□□□□□ -0.08
BRCA1-228ENST00000618469 KRTAP21-3Q3LHN1 58 aa14.53□□□□□ -0.08
BRCA1-228ENST00000618469 SPANXN4Q5MJ08 99 aa14.53□□□□□ -0.08
BRCA1-228ENST00000618469 EXOSC6Q5RKV6 272 aaKnown RBP14.53□□□□□ -0.08
BRCA1-228ENST00000618469 CCNJQ5T5M9 372 aa14.53□□□□□ -0.08
BRCA1-228ENST00000618469 NXNQ6DKJ4 435 aa14.53□□□□□ -0.08
BRCA1-228ENST00000618469 CDC73Q6P1J9 531 aa14.53□□□□□ -0.08
BRCA1-228ENST00000618469 ANKRD46Q86W74 232 aa14.53□□□□□ -0.08
BRCA1-228ENST00000618469 IFNEQ86WN2 208 aa14.53□□□□□ -0.08
BRCA1-228ENST00000618469 CCDC71Q8IV32 467 aaPredicted RBP14.53□□□□□ -0.08
BRCA1-228ENST00000618469 OR4A15Q8NGL6 344 aa14.53□□□□□ -0.08
BRCA1-228ENST00000618469 ZNF75CPQ92670 426 aaPredicted RBP14.53□□□□□ -0.08
BRCA1-228ENST00000618469 ABTB1Q969K4 478 aaPredicted RBP14.53□□□□□ -0.08
BRCA1-228ENST00000618469 TESCQ96BS2 214 aa14.53□□□□□ -0.08
BRCA1-228ENST00000618469 MOAP1Q96BY2 351 aa14.53□□□□□ -0.08
BRCA1-228ENST00000618469 STACQ99469 402 aa14.53□□□□□ -0.08
BRCA1-228ENST00000618469 TIMP4Q99727 224 aa14.53□□□□□ -0.08
BRCA1-228ENST00000618469 TTYH2Q9BSA4 534 aa14.53□□□□□ -0.08
BRCA1-228ENST00000618469 ACTRT3Q9BYD9 372 aa14.53□□□□□ -0.08
BRCA1-228ENST00000618469 RTN4RQ9BZR6 473 aa14.53□□□□□ -0.08
BRCA1-228ENST00000618469 VIPAS39Q9H9C1 493 aa14.53□□□□□ -0.08
BRCA1-228ENST00000618469 GPATCH2Q9NW75 528 aa14.53□□□□□ -0.08
BRCA1-228ENST00000618469 TAS2R10Q9NYW0 307 aa14.53□□□□□ -0.08
BRCA1-228ENST00000618469 FAF1Q9UNN5 650 aaPredicted RBP14.53□□□□□ -0.08
BRCA1-228ENST00000618469 PCDHGB3Q9Y5G1 929 aa14.53□□□□□ -0.08
BRCA1-228ENST00000618469 ARHGAP21Q5T5U3 1957 aa14.53□□□□□ -0.08
BRCA1-228ENST00000618469 RNF103-CHMP3A0A140T963 221 aa14.52□□□□□ -0.09
BRCA1-228ENST00000618469 HMGB1P1B2RPK0 211 aaPredicted RBP14.52□□□□□ -0.09
BRCA1-228ENST00000618469 C9JVG2 144 aa14.52□□□□□ -0.09
BRCA1-228ENST00000618469 E9PBE3 544 aa14.52□□□□□ -0.09
BRCA1-228ENST00000618469 RNASET2O00584 256 aaKnown RBP14.52□□□□□ -0.09
BRCA1-228ENST00000618469 KRT16P08779 473 aa14.52□□□□□ -0.09
BRCA1-228ENST00000618469 GLI4P10075 376 aa14.52□□□□□ -0.09
BRCA1-228ENST00000618469 CHRNB4P30926 498 aa14.52□□□□□ -0.09
BRCA1-228ENST00000618469 WNT3P56703 355 aa14.52□□□□□ -0.09
BRCA1-228ENST00000618469 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.52□□□□□ -0.09
BRCA1-228ENST00000618469 DPY19L1Q2PZI1 675 aa14.52□□□□□ -0.09
BRCA1-228ENST00000618469 FAM174BQ3ZCQ3 159 aa14.52□□□□□ -0.09
BRCA1-228ENST00000618469 ACSF3Q4G176 576 aaPredicted RBP14.52□□□□□ -0.09
BRCA1-228ENST00000618469 NHSL2Q5HYW2 709 aa14.52□□□□□ -0.09
BRCA1-228ENST00000618469 VASNQ6EMK4 673 aa14.52□□□□□ -0.09
BRCA1-228ENST00000618469 MAVSQ7Z434 540 aa14.52□□□□□ -0.09
BRCA1-228ENST00000618469 SPATA19Q7Z5L4 167 aa14.52□□□□□ -0.09
BRCA1-228ENST00000618469 ZAR1Q86SH2 424 aa14.52□□□□□ -0.09
BRCA1-228ENST00000618469 MARCH3Q86UD3 253 aa14.52□□□□□ -0.09
BRCA1-228ENST00000618469 PM20D2Q8IYS1 436 aa14.52□□□□□ -0.09
BRCA1-228ENST00000618469 OR2M3Q8NG83 312 aa14.52□□□□□ -0.09
BRCA1-228ENST00000618469 OR8J2Q8NGG1 315 aa14.52□□□□□ -0.09
BRCA1-228ENST00000618469 OR10Q1Q8NGQ4 319 aa14.52□□□□□ -0.09
BRCA1-228ENST00000618469 PIWIL2Q8TC59 973 aaKnown RBP14.52□□□□□ -0.09
BRCA1-228ENST00000618469 LRRC8CQ8TDW0 803 aa14.52□□□□□ -0.09
BRCA1-228ENST00000618469 DYDC1Q8WWB3 177 aa14.52□□□□□ -0.09
BRCA1-228ENST00000618469 ASB5Q8WWX0 329 aa14.52□□□□□ -0.09
BRCA1-228ENST00000618469 MARK4Q96L34 752 aa14.52□□□□□ -0.09
BRCA1-228ENST00000618469 SFXN2Q96NB2 322 aa14.52□□□□□ -0.09
BRCA1-228ENST00000618469 BTBD2Q9BX70 525 aa14.52□□□□□ -0.09
BRCA1-228ENST00000618469 PRDM14Q9GZV8 571 aa14.52□□□□□ -0.09
BRCA1-228ENST00000618469 DSN1Q9H410 356 aa14.52□□□□□ -0.09
BRCA1-228ENST00000618469 SDHAF3Q9NRP4 125 aa14.52□□□□□ -0.09
BRCA1-228ENST00000618469 DUSP22Q9NRW4 184 aa14.52□□□□□ -0.09
BRCA1-228ENST00000618469 GMFGO60234 142 aa14.51□□□□□ -0.09
BRCA1-228ENST00000618469 OXSR1O95747 527 aaPredicted RBP14.51□□□□□ -0.09
BRCA1-228ENST00000618469 ANGPTL1O95841 491 aa14.51□□□□□ -0.09
BRCA1-228ENST00000618469 ACTL6AO96019 429 aa14.51□□□□□ -0.09
BRCA1-228ENST00000618469 DPP4P27487 766 aa14.51□□□□□ -0.09
BRCA1-228ENST00000618469 SSTR2P30874 369 aa14.51□□□□□ -0.09
BRCA1-228ENST00000618469 UFM1P61960 85 aa14.51□□□□□ -0.09
BRCA1-228ENST00000618469 RPS26P62854 115 aaKnown RBP14.51□□□□□ -0.09
BRCA1-228ENST00000618469 TLE4Q04727 773 aa14.51□□□□□ -0.09
BRCA1-228ENST00000618469 SLC9B1Q4ZJI4 515 aa14.51□□□□□ -0.09
BRCA1-228ENST00000618469 ANXA8L1Q5VT79 327 aa14.51□□□□□ -0.09
BRCA1-228ENST00000618469 BHLHB9Q6PI77 547 aa14.51□□□□□ -0.09
BRCA1-228ENST00000618469 SPNS3Q6ZMD2 512 aa14.51□□□□□ -0.09
BRCA1-228ENST00000618469 CLEC4FQ8N1N0 589 aa14.51□□□□□ -0.09
BRCA1-228ENST00000618469 FADS6Q8N9I5 356 aa14.51□□□□□ -0.09
BRCA1-228ENST00000618469 GATSQ8NAP1 163 aa14.51□□□□□ -0.09
BRCA1-228ENST00000618469 OR5D16Q8NGK9 328 aa14.51□□□□□ -0.09
BRCA1-228ENST00000618469 ADAMTS15Q8TE58 950 aa14.51□□□□□ -0.09
BRCA1-228ENST00000618469 SLC35G5Q96KT7 338 aa14.51□□□□□ -0.09
BRCA1-228ENST00000618469 TEX37Q96LM6 180 aa14.51□□□□□ -0.09
BRCA1-228ENST00000618469 G6PC3Q9BUM1 346 aa14.51□□□□□ -0.09
BRCA1-228ENST00000618469 PIGUQ9H490 435 aa14.51□□□□□ -0.09
BRCA1-228ENST00000618469 FBXO34Q9NWN3 711 aa14.51□□□□□ -0.09
BRCA1-228ENST00000618469 MED11Q9P086 117 aa14.51□□□□□ -0.09
BRCA1-228ENST00000618469 PCDHGB4Q9UN71 923 aa14.51□□□□□ -0.09
BRCA1-228ENST00000618469 RPH3AQ9Y2J0 694 aaPredicted RBP14.51□□□□□ -0.09
BRCA1-228ENST00000618469 A0A0G2JNJ9 132 aa14.5□□□□□ -0.09
BRCA1-228ENST00000618469 KDM4EB2RXH2 506 aaPredicted RBP14.5□□□□□ -0.09
BRCA1-228ENST00000618469 H0Y3Z8 333 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms