RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 MAT2BQ9NZL9 334 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 MAU2Q9Y6X3 613 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 HEATR5AQ86XA9 2040 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 CDC42EP2O14613 210 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 ASNA1O43681 348 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 CSO75390 466 aaKnown RBP11.55□□□□□ -0.56
CIITA-212ENST00000618207 BLKP51451 505 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 TDGQ13569 410 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 PRICKLE4Q2TBC4 344 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 SLC35F1Q5T1Q4 408 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 LIPKQ5VXJ0 399 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 SLC27A4Q6P1M0 643 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 ARL14Q8N4G2 192 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 C19orf47Q8N9M1 422 aaKnown RBP11.55□□□□□ -0.56
CIITA-212ENST00000618207 TMEM80Q96HE8 168 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 ARHGDIGQ99819 225 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 CNPPD1Q9BV87 410 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 DPH1Q9BZG8 443 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 SLC25A19Q9HC21 320 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 HMG20AQ9NP66 347 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 ZMAT5Q9UDW3 170 aaKnown RBP11.55□□□□□ -0.56
CIITA-212ENST00000618207 C19orf53Q9UNZ5 99 aaPredicted RBP11.55□□□□□ -0.56
CIITA-212ENST00000618207 CSNK1G3Q9Y6M4 447 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 OR5K4A6NMS3 321 aa11.54□□□□□ -0.56
CIITA-212ENST00000618207 KIAA0513O60268 411 aa11.54□□□□□ -0.56
CIITA-212ENST00000618207 MRPS14O60783 128 aaKnown RBP11.54□□□□□ -0.56
CIITA-212ENST00000618207 SRFP11831 508 aa11.54□□□□□ -0.56
CIITA-212ENST00000618207 SEPHS1P49903 392 aa11.54□□□□□ -0.56
CIITA-212ENST00000618207 CCR5P51681 352 aa11.54□□□□□ -0.56
CIITA-212ENST00000618207 SMSP52788 366 aa11.54□□□□□ -0.56
CIITA-212ENST00000618207 STX4Q12846 297 aa11.54□□□□□ -0.56
CIITA-212ENST00000618207 KCNAB1Q14722 419 aa11.54□□□□□ -0.56
CIITA-212ENST00000618207 SSX1Q16384 188 aa11.54□□□□□ -0.56
CIITA-212ENST00000618207 HEPHL1Q6MZM0 1159 aa11.54□□□□□ -0.56
CIITA-212ENST00000618207 RNF44Q7L0R7 432 aa11.54□□□□□ -0.56
CIITA-212ENST00000618207 SYT13Q7L8C5 426 aa11.54□□□□□ -0.56
CIITA-212ENST00000618207 CENPSQ8N2Z9 138 aa11.54□□□□□ -0.56
CIITA-212ENST00000618207 ZFP41Q8N8Y5 198 aa11.54□□□□□ -0.56
CIITA-212ENST00000618207 PFN4Q8NHR9 129 aa11.54□□□□□ -0.56
CIITA-212ENST00000618207 PIGXQ8TBF5 258 aa11.54□□□□□ -0.56
CIITA-212ENST00000618207 KCNS3Q9BQ31 491 aa11.54□□□□□ -0.56
CIITA-212ENST00000618207 ORAI3Q9BRQ5 295 aa11.54□□□□□ -0.56
CIITA-212ENST00000618207 PHF7Q9BWX1 381 aaPredicted RBP11.54□□□□□ -0.56
CIITA-212ENST00000618207 PIGUQ9H490 435 aa11.54□□□□□ -0.56
CIITA-212ENST00000618207 UBE2ZQ9H832 354 aaPredicted RBP11.54□□□□□ -0.56
CIITA-212ENST00000618207 RPL36Q9Y3U8 105 aaKnown RBP11.54□□□□□ -0.56
CIITA-212ENST00000618207 ARID1BQ8NFD5 2236 aaPredicted RBP11.54□□□□□ -0.56
CIITA-212ENST00000618207 ASCC3Q8N3C0 2202 aaKnown RBP11.54□□□□□ -0.56
CIITA-212ENST00000618207 MYL12BO14950 172 aa11.54□□□□□ -0.56
CIITA-212ENST00000618207 STX11O75558 287 aa11.54□□□□□ -0.56
CIITA-212ENST00000618207 OCM2P0CE71 109 aa11.54□□□□□ -0.56
CIITA-212ENST00000618207 OCMP0CE72 109 aaPredicted RBP11.54□□□□□ -0.56
CIITA-212ENST00000618207 MAOAP21397 527 aa11.54□□□□□ -0.56
CIITA-212ENST00000618207 PRKAR1BP31321 381 aa11.54□□□□□ -0.56
CIITA-212ENST00000618207 CSNK1EP49674 416 aaKnown RBP11.54□□□□□ -0.56
CIITA-212ENST00000618207 SNRPGP62308 76 aaKnown RBP11.54□□□□□ -0.56
CIITA-212ENST00000618207 RPL6Q02878 288 aaKnown RBP11.54□□□□□ -0.56
CIITA-212ENST00000618207 MXD1Q05195 221 aa11.54□□□□□ -0.56
CIITA-212ENST00000618207 COX10Q12887 443 aa11.54□□□□□ -0.56
CIITA-212ENST00000618207 IRF3Q14653 427 aa11.54□□□□□ -0.56
CIITA-212ENST00000618207 SPHARQ15513 63 aa11.54□□□□□ -0.56
CIITA-212ENST00000618207 ARHGAP11BQ3KRB8 267 aa11.54□□□□□ -0.56
CIITA-212ENST00000618207 LHFPL3Q86UP9 236 aa11.54□□□□□ -0.56
CIITA-212ENST00000618207 SAMD14Q8IZD0 417 aaPredicted RBP11.54□□□□□ -0.56
CIITA-212ENST00000618207 CYP4Z2PQ8N1L4 340 aa11.54□□□□□ -0.56
CIITA-212ENST00000618207 ZFPM2Q8WW38 1151 aa11.54□□□□□ -0.56
CIITA-212ENST00000618207 ANKRD9Q96BM1 317 aaPredicted RBP11.54□□□□□ -0.56
CIITA-212ENST00000618207 MMABQ96EY8 250 aaPredicted RBP11.54□□□□□ -0.56
CIITA-212ENST00000618207 ZNF582Q96NG8 517 aaPredicted RBP11.54□□□□□ -0.56
CIITA-212ENST00000618207 TRIM45Q9H8W5 580 aaPredicted RBP11.54□□□□□ -0.56
CIITA-212ENST00000618207 PTGFRNQ9P2B2 879 aa11.54□□□□□ -0.56
CIITA-212ENST00000618207 POMT2Q9UKY4 750 aa11.54□□□□□ -0.56
CIITA-212ENST00000618207 DTX4Q9Y2E6 619 aa11.54□□□□□ -0.56
CIITA-212ENST00000618207 DMDP11532 3685 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 MPDZO75970 2070 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 AGAP5A6NIR3 686 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 SYT5O00445 386 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 HBQ1P09105 142 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 CD38P28907 300 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 ETV5P41161 510 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 SLC15A1P46059 708 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 OMPP47874 163 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 TGM4P49221 684 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 ETV1P50549 477 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 IFITM3Q01628 133 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 MADCAM1Q13477 382 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 DNASE1L3Q13609 305 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 ZNF846Q147U1 533 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 PRAMEF17Q5VTA0 474 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 WDR88Q6ZMY6 472 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 VWA5B2Q8N398 1253 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 OR6Q1Q8NGQ2 317 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 RBM18Q96H35 190 aaKnown RBP11.53□□□□□ -0.56
CIITA-212ENST00000618207 PTCHD1Q96NR3 888 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 DACH2Q96NX9 599 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 OPALINQ96PE5 141 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 CDCA4Q9BXL8 241 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 SEMA6CQ9H3T2 930 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 LYRM4Q9HD34 91 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms